BAC Information

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BAC

Clone NameB6Ng01-100L08
Chromosome18 (Build37)
Map Location 32,056,560 - 32,201,803
singlet/doubletdoublet
Overlap geneWdr33, Sft2d3, Lims2, Gpr17, Myo7b
Upstream geneRit2, EG666130, Syt4, LOC383420, Slc25a46, Sap130, LOC640549, Ammecr1l, Polr2d, EG626327
Downstream geneIws1, Proc, LOC546710, Map3k2, Ercc3, Bin1, Gypc, LOC100041160, LOC100041170, Tslp, Wdr36, Camk4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100L08.bB6Ng01-100L08.g
ACCDH910129DH910130
length999999
definitionDH910129|Mus musculus domesticus DNA, BAC clone: B6Ng01-100L08, 5' end.DH910130|Mus musculus domesticus DNA, BAC clone: B6Ng01-100L08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,200,800 - 32,201,803)(32,056,560 - 32,057,562)
sequence
gaattctctccccagtccctataaggggaatttctaccgaatatcacata
agacaagctctggacagaaatgtcatatgtgagcttctgtgccacgtggg
tatctgttggtgtcttgctcagctgggtgcagtggaagactccaactcag
tatacagtcaaggttagctcaaactcctgattctactgcctccacctgct
ggatgtcgggatcacaggcttatgtgttcccgtgcccagtttgtgtggtg
ctgtgggggtggaacctggggctccctttgtgctaggcaagcattctacc
accatagccacacctccaggccttgctcacattggttgcctttattacca
cagtctggagactgtgaagcaaagcctggttctgttagattcctgagcat
tgccaaagaaaataccacaggggcccatgattgggacagttactagaggg
cactttaggaagttagacttctcttctgtacatcacaaaccagtcaaaaa
gactgcccctcaggtggacctttgcaaacatccgataggtgataccttat
ggtttccattgctgtggagataccatgaccaagacaatgcttacaaagga
catttaattgggggctggcttacagtatcagaggttcagtccattatcat
catggtgggaagcatggcagtgtgcaggcagacttggtgctggagaagga
gctgagaatcttgatccaaaggcaaccaggagagactgtcacccactggg
aggaagctctcttcaacactctgagtagagcctgagcatagaaggagacc
tccagtgcccaccccacagtgacacactttcctccagcaaggccacacct
tctaaaagtgccactcccaatgggccaagcttattcaaccaccacaggtg
gcttctttgtcgcagagggccccaaacagcatcttcaagcacactaaccc
tgccatctgatatgggcccacgagggcccgtgagcctgttagctggaca
gaattcaatgagggggatggccggggagcagcccgaggccccccaggggc
atgggaaggccgcagacctggagatgaccgcttcccccgggatcctgatg
acccgcgatttcgagggcgcagggaagagaggtaggaaagtggcgtcctt
gggttctctgcattttccctagccctcgttacaaagatgtcttcctctgt
gtaggggaaagtactgcattgactgagcctaccttctgtgggttagcatt
tacacttgcaagttatgttacatgttataagttctctgttagttctgcat
ttgaggcctttttctttcaagttgtttgttttgatatggtctcattgctg
tagtccaggctatccctgaattccctgtccttgtctctgcctcctgtgtg
tggtgtatacgcatgtcttggatgtcattttcagtgtccgggctcacctt
atttagataataatatctgagccacatactataattgaacatcatacagg
cctgtaaaataggcctaaaggtcttaacaaagtcagatcaaaataaacat
caccttccctttacactcagttcaggcttgaattgccaccctgaggatgt
aaaaagaacagaagcagtgtggaggaagagaagcaggagttgctataatt
taaataagcagggacagtagtcattgagtgtgtaagaattgacatctgcg
cagtgttcgttgatttcttgaatctttgcatttatgcaaacctcacattt
tgtggtcttcatttatatttttgtcttacccatggcagattttcagccta
gaccctgttcagacacacatttgtactattctctgggcttgctttccctc
cacccggaacacactctgcagatagctgtgactccctctgttagagcttt
cctcctagagagctgtgactccttctgtaaagctttcctcctagagagtt
tgtgtttctcgtttgtttgtgttttggttttttcaagcagggttctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_32200800_32201803
seq2: B6Ng01-100L08.b_50_1048 (reverse)

seq1  TGTCCAGCTAACAAGCCTCACGGCCCTTCGTGGGGCCCATATCCAGATGG  50
      |||||||||||| || ||||||| || |||| |||||||||| |||||||
seq2  TGTCCAGCTAAC-AGGCTCACGGGCCCTCGT-GGGCCCATAT-CAGATGG  47

seq1  CAGGGTTAGTGTGCTTTGAAAGTGCTGTTTGGGGCCCTCTGGCGACAAAG  100
      |||||||||||||| |||||  |||||||||||||||||| |||||||||
seq2  CAGGGTTAGTGTGC-TTGAAGATGCTGTTTGGGGCCCTCT-GCGACAAAG  95

seq1  AAGCCACCTGTGGTGGTTTGAATATGCTTGGCCCATTGGGAGTGGCACTT  150
      |||||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  AAGCCACCTGTGGTGG-TTGAATAAGCTTGGCCCATTGGGAGTGGCACTT  144

seq1  TTAGAAGGTGTGGCCTTGCTGGAGG-AAGTGTGTCACTGTGGGGTGGGCA  199
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTAGAAGGTGTGGCCTTGCTGGAGGAAAGTGTGTCACTGTGGGGTGGGCA  194

seq1  CTGGAGGTCTCCTTCTATGCTCAGGCTCTACTCAGAGTGTTGAAGAGAGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGTCTCCTTCTATGCTCAGGCTCTACTCAGAGTGTTGAAGAGAGC  244

seq1  TTCCTCCCAGTGGGTGACAGTCTCTCCTGGTTGCCTTTGGATCAAGATTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCCAGTGGGTGACAGTCTCTCCTGGTTGCCTTTGGATCAAGATTC  294

seq1  TCAGCTCCTTCTCCAGCACCAAGTCTGCCTGCACACTGCCATGCTTCCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCTTCTCCAGCACCAAGTCTGCCTGCACACTGCCATGCTTCCCA  344

seq1  CCATGATGATAATGGACTGAACCTCTGATACTGTAAGCCAGCCCCCAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATGATAATGGACTGAACCTCTGATACTGTAAGCCAGCCCCCAATT  394

seq1  AAATGTCCTTTGTAAGCATTGTCTTGGTCATGGTATCTCCACAGCAATGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCTTTGTAAGCATTGTCTTGGTCATGGTATCTCCACAGCAATGG  444

seq1  AAACCATAAGGTATCACCTATCGGATGTTTGCAAAGGTCCACCTGAGGGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATAAGGTATCACCTATCGGATGTTTGCAAAGGTCCACCTGAGGGG  494

seq1  CAGTCTTTTTGACTGGTTTGTGATGTACAGAAGAGAAGTCTAACTTCCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTTTGACTGGTTTGTGATGTACAGAAGAGAAGTCTAACTTCCTA  544

seq1  AAGTGCCCTCTAGTAACTGTCCCAATCATGGGCCCCTGTGGTATTTTCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCCTCTAGTAACTGTCCCAATCATGGGCCCCTGTGGTATTTTCTT  594

seq1  TGGCAATGCTCAGGAATCTAACAGAACCAGGCTTTGCTTCACAGTCTCCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAATGCTCAGGAATCTAACAGAACCAGGCTTTGCTTCACAGTCTCCA  644

seq1  GACTGTGGTAATAAAGGCAACCAATGTGAGCAAGGCCTGGAGGTGTGGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGGTAATAAAGGCAACCAATGTGAGCAAGGCCTGGAGGTGTGGCT  694

seq1  ATGGTGGTAGAATGCTTGCCTAGCACAAAGGGAGCCCCAGGTTCCACCCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGTAGAATGCTTGCCTAGCACAAAGGGAGCCCCAGGTTCCACCCC  744

seq1  CACAGCACCACACAAACTGGGCACGGGAACACATAAGCCTGTGATCCCGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCACCACACAAACTGGGCACGGGAACACATAAGCCTGTGATCCCGA  794

seq1  CATCCAGCAGGTGGAGGCAGTAGAATCAGGAGTTTGAGCTAACCTTGACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGCAGGTGGAGGCAGTAGAATCAGGAGTTTGAGCTAACCTTGACT  844

seq1  GTATACTGAGTTGGAGTCTTCCACTGCACCCAGCTGAGCAAGACACCAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTGAGTTGGAGTCTTCCACTGCACCCAGCTGAGCAAGACACCAAC  894

seq1  AGATACCCACGTGGCACAGAAGCTCACATATGACATTTCTGTCCAGAGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCCACGTGGCACAGAAGCTCACATATGACATTTCTGTCCAGAGCT  944

seq1  TGTCTTATGTGATATTCGGTAGAAATTCCCCTTATAGGGACTGGGGAGAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTATGTGATATTCGGTAGAAATTCCCCTTATAGGGACTGGGGAGAG  994

seq1  AATTC  1004
      |||||
seq2  AATTC  999

seq1: chr18_32056560_32057562
seq2: B6Ng01-100L08.g_72_1070

seq1  GAATTCAATGAGGGGGATGGCCGGGGAGCAGCCCGAGGCCCCCCAGGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGAGGGGGATGGCCGGGGAGCAGCCCGAGGCCCCCCAGGGGC  50

seq1  ATGGGAAGGCCGCAGACCTGGAGATGACCGCTTCCCCCGGGATCCTGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAGGCCGCAGACCTGGAGATGACCGCTTCCCCCGGGATCCTGATG  100

seq1  ACCCGCGATTTCGAGGGCGCAGGGAAGAGAGGTAGGAAAGTGGCGTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGCGATTTCGAGGGCGCAGGGAAGAGAGGTAGGAAAGTGGCGTCCTT  150

seq1  GGGTTCTCTGCATTTTCCCTAGCCCTCGTTACAAAGATGTCTTCCTCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTCTGCATTTTCCCTAGCCCTCGTTACAAAGATGTCTTCCTCTGT  200

seq1  GTAGGGGAAAGTACTGCATTGACTGAGCCTACCTTCTGTGGGTTAGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGGAAAGTACTGCATTGACTGAGCCTACCTTCTGTGGGTTAGCATT  250

seq1  TACACTTGCAAGTTATGTTACATGTTATAAGTTCTCTGTTAGTTCTGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTGCAAGTTATGTTACATGTTATAAGTTCTCTGTTAGTTCTGCAT  300

seq1  TTGAGGCCTTTTTCTTTCAAGTTGTTTGTTTTGATATGGTCTCATTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCCTTTTTCTTTCAAGTTGTTTGTTTTGATATGGTCTCATTGCTG  350

seq1  TAGTCCAGGCTATCCCTGAATTCCCTGTCCTTGTCTCTGCCTCCTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCAGGCTATCCCTGAATTCCCTGTCCTTGTCTCTGCCTCCTGTGTG  400

seq1  TGGTGTATACGCATGTCTTGGATGTCATTTTCAGTGTCCGGGCTCACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTATACGCATGTCTTGGATGTCATTTTCAGTGTCCGGGCTCACCTT  450

seq1  ATTTAGATAATAATATCTGAGCCACATACTATAATTGAACATCATACAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGATAATAATATCTGAGCCACATACTATAATTGAACATCATACAGG  500

seq1  CCTGTAAAATAGGCCTAAAGGTCTTAACAAAGTCAGATCAAAATAAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAAAATAGGCCTAAAGGTCTTAACAAAGTCAGATCAAAATAAACAT  550

seq1  CACCTTCCCTTTACACTCAGTTCAGGCTTGAATTGCCACCCTGAGGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCCCTTTACACTCAGTTCAGGCTTGAATTGCCACCCTGAGGATGT  600

seq1  AAAAAGAACAGAAGCAGTGTGGAGGAAGAGAAGCAGGAGTTGCTATAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAACAGAAGCAGTGTGGAGGAAGAGAAGCAGGAGTTGCTATAATT  650

seq1  TAAATAAGCAGGGACAGTAGTCATTGAGTGTGTAAGAATTGACATCTGCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAGCAGGGACAGTAGTCATTGAGTGTGTAAGAATTGACATCTGCG  700

seq1  CAGTGTTCGTTGATTTCTTGAATCTTTGCATTTATGCAAACCTCACATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTCGTTGATTTCTTGAATCTTTGCATTTATGCAAACCTCACATTT  750

seq1  TGTGGTCTTCATTTATATTTTTGTC-TACCCATGGCAGA-TTTCAGCCTA  798
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  TGTGGTCTTCATTTATATTTTTGTCTTACCCATGGCAGATTTTCAGCCTA  800

seq1  GACCCTGTTCAGACACACATTTGTACTACTCTCTGGGCTTGCCTTCCCTC  848
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  GACCCTGTTCAGACACACATTTGTACTATTCTCTGGGCTTGCTTTCCCTC  850

seq1  CACCCGGAACAGCACTCTGCAGATAGCTGTGACTCCTTCTGTTAGAGCCT  898
      ||||||||||| |||||||||||||||||||||||| |||||||||| ||
seq2  CACCCGGAACA-CACTCTGCAGATAGCTGTGACTCCCTCTGTTAGAG-CT  898

seq1  TTCCTCCTAGAGAGCTGTGACTCCTTCTGTTAGAGCCTTTCCTCCTAGAG  948
      ||||||||||||||||||||||||||||| || || ||||||||||||||
seq2  TTCCTCCTAGAGAGCTGTGACTCCTTCTG-TAAAG-CTTTCCTCCTAGAG  946

seq1  AGCTTTGTGTTTCTCGTTTGTTTGTGTATTGGTTTTTTCAAGCAGGGTTT  998
      || |||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  AG-TTTGTGTTTCTCGTTTGTTTGTGTTTTGGTTTTTTCAAGCAGGG-TT  994

seq1  CTCTG  1003
      |||||
seq2  CTCTG  999