BAC Information

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BAC

Clone NameB6Ng01-101K24
Chromosome18 (Build37)
Map Location 23,450,599 - 23,451,759
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546708, LOC100040547, Asxl3, Nol4, LOC100040579, LOC665797
Downstream geneDtna, Mapre2, EG665813, LOC100040623, Zfp397, C230097I24Rik, Zfp35, Zfp191, D030070L09Rik, Galnt1, LOC665586
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101K24.bB6Ng01-101K24.g
ACCDH910791DH910792
length1,2291,134
definitionDH910791|Mus musculus domesticus DNA, BAC clone: B6Ng01-101K24, 5' end.DH910792|Mus musculus domesticus DNA, BAC clone: B6Ng01-101K24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttcccaggcactcctccctgcaaaaggtatttaacctcaga
cctgcccctgagaagtggggtaaggttttattcctctactttacaccatg
acaatcaatgtcttaaaagcatggactgcctcttttcactgggatcctcc
gtggggagcaatggaacaggttttcatctaaagagccggctgtctcatct
ccagctcaaggcctctcagggctcccagccatggcctccaccaagcccag
ccacctgcctaacaagccaaggactcctccctgcaggacccagctggagc
tttccctgcctttttccctctgcccgcaccccattctcagctcttccaca
gcatccagtggtgcctggctgtccaagagcctgagaagcagatgtccctg
gcctctctgcaggcccggggacccctgagccagctccagcatcccccagc
cctggtccggtgcccggcaggttctcatagcctgacaaccgccctgccac
ccccctcaggcctgtgctggcatggggtaagtgcagtcaaaactcccgca
tcccaccttcccgagtggcccgagtcctggggtggagtggacttggtgga
gtggacttcccgagtcctggggtggagtggacttgggctaccacaaaccc
tgtagagctcatgagaaggaggcaaacgtctttttagtgcatacatagtg
gaaggtctttgaaaggccaagagaaaaacaggggtactcccaaacctata
atgtctacaaagaagtctattctttcttgggcttccctaacagtgatgca
aaagtcaattggcttaagataatatatatgtattatatcacagttcagaa
aatctcaaatttagggtcttaggtagataatcccctttggggactttggg
agaggacttgcccatgcttttctcctggaaaaaggcaatcagtaatggca
atcattgatgttccttatcttgtggcactgctagtcatctgtacttcaac
ttacatggtcctgattcaatggtgtctctgtgtgggcctttgatagcact
catgtactggggtattggtctttccaatcccacaagaatctccgtggtaa
ctcatataaagtcctggtacatgcctagtttatgtcaactttgtaccaag
tctgagttatctccagaataagacagacttacagttgggacaattgactc
tcagtgagatattcctagcagcgtgtaga
gaattccagtacatctaagcagtgacatattaaaactgcatttagtacga
gacatttcaatctgaaaaaaaataatgagaaaaatatgagacatgttaat
ctattaatccaatattgtatagcctgcctgattaattttaaatgctctgt
ttataatctttggctctgctcagagtctctgctacagacatgttaataat
aacctaatcttctatccaactaagttcatttctagttaataaacaaatat
aataggataacataacttagataacagtagacagatagtacttgtagaga
ctattgttatttctgtctcttatataatccacgtataagcagctaccagt
aattacttctagaaacggtgtctgcaattttttttgtattctttctatac
aaaccactctacattaaccaacaaaaatgtgttattgttcttatcctgtg
tccagaacttcctggtggatcaatagagtgaggctccttctccacattta
aggttgggatgtgtccttgaatttctattttatagaagctatgacaacat
tttgtcacgattatccccacccccttcaatcatgaaaagctttgctttcc
ttccccttcaaggaacactataattaaactgagcctttctggataatcca
gagtcatttactctctcaattactctagatgacagcaaccacacacaagt
taagggaagaaagacttactcagtgttttagaggattcgacccccttggg
tgaagcaccctgatggtgagattggttgtggatgaaagttgcttatcttc
tggcatacaattaaagaggaaaggaagcataggaaaaattagaataagaa
ctagtctcccaggacaagactgggagatgtttccttgcactaggcacacc
caatacatcacctgattctaaatggacctaggatcagtcggctcatcaca
cctaactcaaacagaactgcctcgtctagctactcagtctagaactagat
cagagatctcactcagtcttattgcattttaacccccccacccttttctc
gccccttcagtaaccatcagttatgagttcaaaattatctgctttgtatc
atatcatgccttaacacatgtggatgtctaacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_23450599_23451759
seq2: B6Ng01-101K24.g_71_1204

seq1  GAATTCCAGTACATCTAAGCAGTGACATATTAAAACTGCATTTAGTACGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTACATCTAAGCAGTGACATATTAAAACTGCATTTAGTACGA  50

seq1  GACATTTCAATCTGAAAAAAAATAATGAGAAAAATATGAGACATGTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTCAATCTGAAAAAAAATAATGAGAAAAATATGAGACATGTTAAT  100

seq1  CTATTAATCCAATATTGTATAGCCTGCCTGATTAATTTTAAATGCTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAATCCAATATTGTATAGCCTGCCTGATTAATTTTAAATGCTCTGT  150

seq1  TTATAATCTTTGGCTCTGCTCAGAGTCTCTGCTACAGACATGTTAATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATCTTTGGCTCTGCTCAGAGTCTCTGCTACAGACATGTTAATAAT  200

seq1  AACCTAATCTTCTATCCAACTAAGTTCATTTCTAGTTAATAAACAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAATCTTCTATCCAACTAAGTTCATTTCTAGTTAATAAACAAATAT  250

seq1  AATAGGATAACATAACTTAGATAACAGTAGACAGATAGTACTTGTAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGATAACATAACTTAGATAACAGTAGACAGATAGTACTTGTAGAGA  300

seq1  CTATTGTTATTTCTGTCTCTTATATAATCCACGTATAAGCAGCTACCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTTATTTCTGTCTCTTATATAATCCACGTATAAGCAGCTACCAGT  350

seq1  AATTACTTCTAGAAACGGTGTCTGCAATTTTTTTTGTATTCTTTCTATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTTCTAGAAACGGTGTCTGCAATTTTTTTTGTATTCTTTCTATAC  400

seq1  AAACCACTCTACATTAACCAACAAAAATGTGTTATTGTTCTTATCCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACTCTACATTAACCAACAAAAATGTGTTATTGTTCTTATCCTGTG  450

seq1  TCCAGAACTTCCTGGTGGATCAATAGAGTGAGGCTCCTTCTCCACATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAACTTCCTGGTGGATCAATAGAGTGAGGCTCCTTCTCCACATTTA  500

seq1  AGGTTGGGATGTGTCCTTGAATTTCTATTTTATAGAAGCTATGACAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGGATGTGTCCTTGAATTTCTATTTTATAGAAGCTATGACAACAT  550

seq1  TTTGTCACGATTATCCCCACCCCCTTCAATCATGAAAAGCTTTGCTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACGATTATCCCCACCCCCTTCAATCATGAAAAGCTTTGCTTTCC  600

seq1  TTCCCCTTCAAGGAACACTATAATTAAACTGAGCCTTTCTGGATAATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTTCAAGGAACACTATAATTAAACTGAGCCTTTCTGGATAATCCA  650

seq1  GAGTCATTTACTCTCTCAATTACTCTAGATGACAGCAACCACACACAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATTTACTCTCTCAATTACTCTAGATGACAGCAACCACACACAAGT  700

seq1  TAAGGGAAGAAAGACTTACTCAGTGTTTTAGAGGATTCGACCCCCTTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGAAGAAAGACTTACTCAGTGTTTTAGAGGATTCGACCCCCTTGGG  750

seq1  TGAAGCACCCTGATGGTGAGATTGGTTGTGGATGAAAGTTGCTTATCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCACCCTGATGGTGAGATTGGTTGTGGATGAAAGTTGCTTATCTTC  800

seq1  TGGCATACAATTAAAAGAGGAAAGGAAGCATAGGAAAAATTAGAATAAGA  850
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGGCATACAATT-AAAGAGGAAAGGAAGCATAGGAAAAATTAGAATAAGA  849

seq1  ACTAGTCTCCCAGGACAAGACTGGGAGATGTTTCCTTGCACTAGGCCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACTAGTCTCCCAGGACAAGACTGGGAGATGTTTCCTTGCACTAGG-CACA  898

seq1  CCCAATACATCACCTGATTCTAAATGGACCTAAGAATCAGTCGGCTCATC  950
      ||||||||||||||||||||||||||||||| || |||||||||||||||
seq2  CCCAATACATCACCTGATTCTAAATGGACCT-AGGATCAGTCGGCTCATC  947

seq1  ACACCTAACTCAAACAGAACTGCCCCGTCCTAGGCCTACTCAGTCTAAGA  1000
      |||||||||||||||||||||||| ||| ||||  ||||||||||| |||
seq2  ACACCTAACTCAAACAGAACTGCCTCGT-CTAG--CTACTCAGTCT-AGA  993

seq1  ACTAGATCAGAGAATCTCAACTCCAGGTCTTTATTTGCATTTTAACCCCC  1050
      |||||||||||| ||||| ||||   |||||   ||||||||||||||||
seq2  ACTAGATCAGAG-ATCTC-ACTC--AGTCTT--ATTGCATTTTAACCCCC  1037

seq1  CCACCCCTTTCTCGCTCTCTCAGTTAACACATACAGGTTATGGAGTTACA  1100
      |||||| |||||||| |  |||| |||| ||| || ||||| ||||| ||
seq2  CCACCCTTTTCTCGCCCCTTCAG-TAAC-CAT-CA-GTTAT-GAGTT-CA  1081

seq1  AAATTATACTGCCTTTGAAAATCATTATCATGCCTTAAACCACATGTGGA  1150
      ||||||| ||| |||||   |||| |||||||||||||  ||||||||||
seq2  AAATTAT-CTG-CTTTG--TATCA-TATCATGCCTTAA--CACATGTGGA  1124

seq1  TGTCTTAACCT  1161
      |||| ||||||
seq2  TGTC-TAACCT  1134