BAC Information

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BAC

Clone NameB6Ng01-102P16
Chromosome18 (Build37)
Map Location 18,109,526 - 18,110,155
singlet/doubletsinglet
Overlap genenone
Upstream gene1700001G01Rik, 4921533I20Rik, LOC100040647
Downstream geneLOC100040658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102P16.bB6Ng01-102P16.g
ACCDH911715DH911716
length1,0051,001
definitionDH911715|Mus musculus domesticus DNA, BAC clone: B6Ng01-102P16, 5' end.DH911716|Mus musculus domesticus DNA, BAC clone: B6Ng01-102P16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaagacttttattataaatcggtgttggattttg
tcaaatgctttctccgaatctaaggagatgatcatgtggtttttgtcttt
gagtttgtttatatactggattacattgatggatttccatatattaaacc
atccctgcatccctgagatgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttggattcggttagcgagaactttattgaggatttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttgggt
ctttttgtggtttaggtatcagagtaagcgtggtttcatagaatgagttg
ggtagagtaccttctgtttctgttttgtggaatagtttgtgaagaactgg
aattagttcttctttgaaggtggaagaactctgcactaaacccatctggt
cctgggctttttttggttgggagactattaatgactgcttctatttcttt
aggggacataggactgcttagatcattaacctggtcttgatttaactttg
gtacgtggtatctgtctagaaacttgtccatttcatccaggttctccagt
tttgttgagtatagccttttgtagaaggatctaatggtattttggatttc
ttcaggatctgttgttatgtctctcttttcattaaacttatgggacacaa
tgaaagcatttctaagagggaaactcatagctctgaattcctccaaaaag
aaactagagagagcacacattagcagcttgacaacacacccaaaagctct
agaaaataaggaagaaaattcacccaagagtagtagacagcaggaaatat
caaactcaggggcgaatcaacccagtggaacaagactattcaagaatcaa
ccaaacgaggagctggttctttgagaaaatcacaagattagataaccctt
agccagactcactagaaggcacagggaagcatcatattaacaaatgggag
acttt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccgaaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagtcagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaacgcaaatgaaatgtactcactgataagtgaagtgtggacactatgc
ccctccttagaattgggaacaaaacacccatggaaggagttacaaagaca
agtttggagctgagatgaaagatggaccatgtagagactgccattatcca
gggatccacccccatatcagcatccaaacgctgacccattgcatatatct
agcaagattttatcgaagacccgaattagctgtttcttgtagaactttgc
gggcctagcaaaccagaagtgattgcttccagtcagctatgatgatcacg
ggctccaatggagactaagaagtctcagagcttagatctcaacctatgtg
aacactttgactaccgtcccggacctgacttgctaatgtacaaaggcatc
gcctcggaaaggcctggaccaatatgtcatacgaaccggcaaagatgtgg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_18109526_18110155
seq2: B6Ng01-102P16.b_49_676 (reverse)

seq1  CCTTCTACAAAAGGCTATACTCAACAAAACTGGAGAACCTGGATGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTACAAAAGGCTATACTCAACAAAACTGGAGAACCTGGATGAAATG  50

seq1  GAGAAGTTTCTAGACAGATACCAGGTACCAAAGTTGAATCAAGATCAGGT  100
      || |||||||||||||||||||| ||||||||||| |||||||| |||||
seq2  GACAAGTTTCTAGACAGATACCACGTACCAAAGTTAAATCAAGACCAGGT  100

seq1  TAATGATCTAAACAGCCCGATATCCCCCAAAGAAATAGAAGCAGTCATTA  150
      ||||||||||| ||| || || ||||| ||||||||||||||||||||||
seq2  TAATGATCTAAGCAGTCCTATGTCCCCTAAAGAAATAGAAGCAGTCATTA  150

seq1  ATAGTCTCCCAACCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTCCCAACCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAG  200

seq1  TTCTATCAGACCTCCAAAGAAGATCTAATCCCAGTTCTTCACAAACTATT  250
      ||||  |  |||| ||||||||| ||||| ||||||||||||||||||||
seq2  TTCTTCC--ACCTTCAAAGAAGAACTAATTCCAGTTCTTCACAAACTATT  248

seq1  CCACAAAATAGAAACAGAAGGTACTCTACCCAACTCATTCTATGAAGCCA  300
      |||||||| ||||||||||||||||||||||||||||||||||||| |||
seq2  CCACAAAACAGAAACAGAAGGTACTCTACCCAACTCATTCTATGAAACCA  298

seq1  CAATTACTCTGATACCTAAACCACAAAAAGACCCCACAAAGATAGAGAAC  350
      |  ||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CGCTTACTCTGATACCTAAACCACAAAAAGACCCAACAAAGATAGAGAAC  348

seq1  TTCAGACCAATATCCCTTCTGAATATTGGTGCAAAAATCCTCAATAAAGT  400
      ||||||||||| |||||| ||||||| | |||||||||||||||||||||
seq2  TTCAGACCAATTTCCCTTATGAATATCGATGCAAAAATCCTCAATAAAGT  398

seq1  TCTTGCTAACCGAATCCAAGAACACATCAAAACAATCTTCCATCCTGACC  450
      ||| ||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCTCGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGACC  448

seq1  AAGTAGGTTTCATCCCAGGGATGCAGGGATGGTTCAATATACAGAAATCC  500
      |||||||||||||| ||||||||||||||||||| ||||||  |||||||
seq2  AAGTAGGTTTCATCTCAGGGATGCAGGGATGGTTTAATATATGGAAATCC  498

seq1  ATCAATGTAATCCAGTATATAAACAAACTCAAAGACAAAAACCACATGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGTAATCCAGTATATAAACAAACTCAAAGACAAAAACCACATGAT  548

seq1  CATCTCGTTAGATGCTGAGAAAGCATTTGACAAAATCCAACACCCATTCA  600
      |||||| |||||| | |||||||||||||||||||||||||||| ||| |
seq2  CATCTCCTTAGATTCGGAGAAAGCATTTGACAAAATCCAACACCGATTTA  598

seq1  TGATAAAAGTCTTGGAAAGATCAGGAATTC  630
      | ||||||||||||||||||||||||||||
seq2  TAATAAAAGTCTTGGAAAGATCAGGAATTC  628