BAC Information

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BAC

Clone NameB6Ng01-102P22
Chromosome18 (Build37)
Map Location 73,980,281 - 73,981,132
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043411, LOC100042955, Rkhd2, Smad4, Elac1, Me2
Downstream geneMro, Mapk4, 2810433K01Rik, Cxxc1, EG435570, Mbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b, Acaa2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102P22.bB6Ng01-102P22.g
ACCDH911723DH911724
length8531,148
definitionDH911723|Mus musculus domesticus DNA, BAC clone: B6Ng01-102P22, 5' end.DH911724|Mus musculus domesticus DNA, BAC clone: B6Ng01-102P22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattccagttggccataaacaggcggagagagatctctccgttc
tattggaggctccaacagcaatgaggaaacaggtcaggaagacagtaggc
ctacaccagagtgcattcactttacaaggaacaattcattaacgtgagtt
actttatgtaggtatcagggtagatataaaagtcatgcagaggggtgtgt
atagaaagctcatttcaataagtccacatctgaatagctgttgcccagcc
tgagctagcttcccgagatttcttttacatctttcagtgagctgatgtta
aatgtaacacctcactactgacctctatcagcagagtattaagactaaat
cttaaagctcgacgagtcggatatttctatgctgagaaaagcatgtaaaa
tatcaaaatagttgtttctcattcacagtaaacttagctttttcagcatt
ataataagcagtctggggatagtgcagtcctggagacccgcacaacagga
gataaccatacctgtgcatataaacatgaagccaatatgtaatctattta
atcccagtaagtacaaagaactgcctgtcgcctttcctcgctttcatgca
ctgggacaaagatagccttaaaaaaaattatacaaatggacaaggccttg
ggcttgaggatttggaaacctttggattcagaaaaatatgaggtgtgtat
tgtgcatgtcatgtaatactcacaatggggtctggggctagacctcgaaa
aatgcattcgcagttttcaattttttttttttactgcatgtatgcattgt
gtgtgtgagtgtgtatgtgtttgtgtcagtgtgtatgtgtgtgtatgtgt
cag
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccatttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tctttgttgatttttctcaagaaccaactcctcgtttgggttaattcttt
gaatagttcttcttgtttccacttggttgatttcacccctgagtttgata
ttttcctgccggtctactcctcttggggtgaattgcttcccttttttcta
gagcttttagatggtggtgtcaagctgctagtatgtgctctctcccgttt
ttcttggaaggcactcatagctatgagtttccctctaggaaatggctttc
attgggtcccaagggtttgggtacgttggtggcttcattttcataactct
aaaaagtctttaattctttcttaatcctccttggaccaggatactatgga
ggaaaggtgttccgattccagtgaatggtggccttttggtattatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_73980281_73981132
seq2: B6Ng01-102P22.b_47_899 (reverse)

seq1  CTGACACATACACACACATACACACTGACACAAACACATACACACTCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACATACACACACATACACACTGACACAAACACATACACACTCACA  50

seq1  CACACAATGCATACATGCAGT-AAAAAAAAAAATTGAAAACTGCGAATGC  99
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CACACAATGCATACATGCAGTAAAAAAAAAAAATTGAAAACTGCGAATGC  100

seq1  ATTTTTCGAGGTCTAGCCCCAGACCCCATTGTGAGTATTACATGACATGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCGAGGTCTAGCCCCAGACCCCATTGTGAGTATTACATGACATGC  150

seq1  ACAATACACACCTCATATTTTTCTGAATCCAAAGGTTTCCAAATCCTCAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACACACCTCATATTTTTCTGAATCCAAAGGTTTCCAAATCCTCAA  200

seq1  GCCCAAGGCCTTGTCCATTTGTATAATTTTTTTTAAGGCTATCTTTGTCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGGCCTTGTCCATTTGTATAATTTTTTTTAAGGCTATCTTTGTCC  250

seq1  CAGTGCATGAAAGCGAGGAAAGGCGACAGGCAGTTCTTTGTACTTACTGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCATGAAAGCGAGGAAAGGCGACAGGCAGTTCTTTGTACTTACTGG  300

seq1  GATTAAATAGATTACATATTGGCTTCATGTTTATATGCACAGGTATGGTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAATAGATTACATATTGGCTTCATGTTTATATGCACAGGTATGGTT  350

seq1  ATCTCCTGTTGTGCGGGTCTCCAGGACTGCACTATCCCCAGACTGCTTAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTGTTGTGCGGGTCTCCAGGACTGCACTATCCCCAGACTGCTTAT  400

seq1  TATAATGCTGAAAAAGCTAAGTTTACTGTGAATGAGAAACAACTATTTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGCTGAAAAAGCTAAGTTTACTGTGAATGAGAAACAACTATTTTG  450

seq1  ATATTTTACATGCTTTTCTCAGCATAGAAATATCCGACTCGTCGAGCTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTACATGCTTTTCTCAGCATAGAAATATCCGACTCGTCGAGCTTT  500

seq1  AAGATTTAGTCTTAATACTCTGCTGATAGAGGTCAGTAGTGAGGTGTTAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTAGTCTTAATACTCTGCTGATAGAGGTCAGTAGTGAGGTGTTAC  550

seq1  ATTTAACATCAGCTCACTGAAAGATGTAAAAGAAATCTCGGGAAGCTAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACATCAGCTCACTGAAAGATGTAAAAGAAATCTCGGGAAGCTAGC  600

seq1  TCAGGCTGGGCAACAGCTATTCAGATGTGGACTTATTGAAATGAGCTTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTGGGCAACAGCTATTCAGATGTGGACTTATTGAAATGAGCTTTC  650

seq1  TATACACACCCCTCTGCATGACTTTTATATCTACCCTGATACCTACATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACACCCCTCTGCATGACTTTTATATCTACCCTGATACCTACATAA  700

seq1  AGTAACTCACGTTAATGAATTGTTCCTTGTAAAGTGAATGCACTCTGGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTCACGTTAATGAATTGTTCCTTGTAAAGTGAATGCACTCTGGTG  750

seq1  TAGGCCTACTGTCTTCCTGACCTGTTTCCTCATTGCTGTTGGAGCCTCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCTACTGTCTTCCTGACCTGTTTCCTCATTGCTGTTGGAGCCTCCA  800

seq1  ATAGAACGGAGAGATCTCTCTCCGCCTGTTTATGGCCAACTGGAATGGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACGGAGAGATCTCTCTCCGCCTGTTTATGGCCAACTGGAATGGAA  850

seq1  TTC  852
      |||
seq2  TTC  853