BAC Information

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BAC

Clone NameB6Ng01-105J01
Chromosome18 (Build37)
Map Location 87,588,936 - 87,589,624
singlet/doubletsinglet
Overlap genenone
Upstream geneNeto1, Cbln2, LOC100039872, LOC100039881, LOC665437, LOC435580, LOC546719, LOC383318
Downstream genePpia-ps18_1039.1, LOC329008, LOC100039961, LOC100039972, LOC623177
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105J01.bB6Ng01-105J01.g
ACCDH913552DH913553
length1,019689
definitionDH913552|Mus musculus domesticus DNA, BAC clone: B6Ng01-105J01, 5' end.DH913553|Mus musculus domesticus DNA, BAC clone: B6Ng01-105J01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctgaaattcctagccaaatggatg
gacctggagagcatcatcctgagtgaggtaacacaatcacaaaggaactc
acacaatatgtactcactgataagtggatactagcccaaaacctaggata
cccacgatataagatacaatttcctaaacacatgaaactcaagaaaaatg
aagactgaagtgtggacactatgcccctccttagaagtgggaacaaaaca
cccatggaaggagttacagaaacaaagtatggagctgagatgaaaggatg
gaccatgtagagactgccatatccagggatccaccccataatcagcttcc
aaatgctgacaccattgcatacactagcaagattttactgaaaggaccca
gatgtagctgtctcttgtgagactatgccggggcctagcaaacacagaag
tggatgctcacagtcagctaatggatggatcacagggctcccaatggagg
agctagagaaagtacccaaggagctaaagggatcttcaaccctataggtg
gaacaacattatgaactaaccagtacccctgagctcttgactctagctgc
atatgtatcaaaagatggcctagtcggccatcactggaaagagaggccca
tggaacacgcagactttgtgtgctcggtacagggaacgccagggtcaaag
ggggggagttggtggggag
gaattcacagcgacaagacataatctcagttcaccggaatacttgaggaa
gtgtcacaatatttttccaattgatttttagaagttgttgccagggatgc
acagtaggtagcatagggtttaggagggttagccaggacttcatcgggca
attggctgcatggacacaacatctggagcagtaagtaatcctctcctacc
agaaaatatgagtgcccgaaacatatccacattaacaaaatagtttgatc
agtcaactaataatgacaattgcaaacataaaatggttcaggaggattcg
ttacctactttatatgttaaactatggaatatataacttaaatagaatgt
gttttacagctcatgcttagcaagaatatagaagtctctcatacgctgga
aataagtagcatataattgaagtaccataatgtaaatatgtacattactg
aaagatatttgcattgtgtatccattgctgttctttatggccttttatga
tttatgtgttctctcagagtttttgtttatattttctttttctttttttt
ttttacagtttattttcttaatcatttactctcttaatatttaaatgtaa
ggatttggtactggtctgtataatcactattacattcacagacttagaaa
ctctctctctctctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_87588936_87589624
seq2: B6Ng01-105J01.g_68_756

seq1  GAATTCACAGCGACAAGACATAATCTCAGTTCACCGGAATACTTGAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCGACAAGACATAATCTCAGTTCACCGGAATACTTGAGGAA  50

seq1  GTGTCACAATATTTTTCCAATTGATTTTTAGAAGTTGTTGCCAGGGATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACAATATTTTTCCAATTGATTTTTAGAAGTTGTTGCCAGGGATGC  100

seq1  ACAGTAGGTAGCATAGGGTTTAGGAGGGTTAGCCAGGACTTCATCGGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGGTAGCATAGGGTTTAGGAGGGTTAGCCAGGACTTCATCGGGCA  150

seq1  ATTGGCTGCATGGACACAACATCTGGAGCAGTAAGTAATCCTCTCCTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTGCATGGACACAACATCTGGAGCAGTAAGTAATCCTCTCCTACC  200

seq1  AGAAAATATGAGTGCCCGAAACATATCCACATTAACAAAATAGTTTGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATATGAGTGCCCGAAACATATCCACATTAACAAAATAGTTTGATC  250

seq1  AGTCAACTAATAATGACAATTGCAAACATAAAATGGTTCAGGAGGATTCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACTAATAATGACAATTGCAAACATAAAATGGTTCAGGAGGATTCG  300

seq1  TTACCTACTTTATATGTTAAACTATGGAATATATAACTTAAATAGAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTACTTTATATGTTAAACTATGGAATATATAACTTAAATAGAATGT  350

seq1  GTTTTACAGCTCATGCTTAGCAAGAATATAGAAGTCTCTCATACGCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACAGCTCATGCTTAGCAAGAATATAGAAGTCTCTCATACGCTGGA  400

seq1  AATAAGTAGCATATAATTGAAGTACCATAATGTAAATATGTACATTACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTAGCATATAATTGAAGTACCATAATGTAAATATGTACATTACTG  450

seq1  AAAGATATTTGCATTGTGTATCCATTGCTGTTCTTTATGGCCTTTTATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATTTGCATTGTGTATCCATTGCTGTTCTTTATGGCCTTTTATGA  500

seq1  TTTATGTGTTCTCTCAGAGTTTTTGTTTATATTTTCTTTTTCTTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTGTTCTCTCAGAGTTTTTGTTTATATTTTCTTTTTCTTTTTTTT  550

seq1  TTTTACAGTTTATTTTCTTAATCATTTACTCTCTTAATATTTAAATGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAGTTTATTTTCTTAATCATTTACTCTCTTAATATTTAAATGTAA  600

seq1  GGATTTGGTACTGGTCTGTATAATCACTATTACATTCACAGACTTAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGGTACTGGTCTGTATAATCACTATTACATTCACAGACTTAGAAA  650

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  689
      |||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  689