BAC Information

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BAC

Clone NameB6Ng01-105L15
Chromosome18 (Build37)
Map Location 34,258,783 - 34,374,914
singlet/doubletdoublet
Overlap genePpia-ps18_319.1
Upstream geneCamk4, Stard4, EG433170, D0H4S114, ENSMUSG00000073610, LOC666281, LOC100041258, Epb4.1l4a, EG666296, Ppia-ps18_318.1
Downstream geneLOC666313, Apc, Srp19, Reep5, Pkd2l2, 2610024E20Rik, Wnt8a, Nme5, 4933408B17Rik, Brd8, Kif20a, Cdc23, Gfra3, Cdc25c, LOC100041859, 2810012G03Rik, LOC100041879, LOC100041887, Jmjd1b, Reep2, Egr1, Etf1, Hspa9, LOC100041377, EG626954, LOC100041951, Ctnna1, Lrrtm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105L15.bB6Ng01-105L15.g
ACCDH913667DH913668
length7501,130
definitionDH913667|Mus musculus domesticus DNA, BAC clone: B6Ng01-105L15, 5' end.DH913668|Mus musculus domesticus DNA, BAC clone: B6Ng01-105L15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,258,783 - 34,259,532)(34,373,782 - 34,374,914)
sequence
gaattctccgcagatccctttaccactaactgacccacactgctctctta
ggccccattctcctctaaccttagctctgttcagtcaagctcctggtggc
ctccctgctgaagtcgctggcactggatcaggatagtgatcagagtcctt
taagacaaggtctctaacatcctgacccagggtggggcttgtgatcttct
gggaagcatattaacaaacatccacccagctaggttgtgctggattcagg
gcagagacgacagtaacaaaattcaggttactgaaacaaaagcacatcac
atttatttagtatttaatctttaatattctacacgtgcacacggtgggtg
tgtgagggactccttcattcatacactcagaagtttctcatcgctggtcc
cagcccctcttcccactcacctcaaaccccattggtatcaccctcactgt
cctctccagcatcttgaaatctctcctggtcgtttgttttacactgtttc
tatcccagggtacaaactcttagactttccttattcctcacgtctgcgtt
ccctgggaggagaacaactttcagaagctcacaaaccctaccctggccca
ggacattagagacctagtcttcaaattccatttattctacggttaggatg
tgaaaatcgctgaagggatgtggtggcacctgcctttaatcctagcactt
gagaggcataggcaggcagatttctgattcgaaggccagcctggtctaca

gaattccataacctagttaactcgatatataaatttagctatcatattta
ataaacatttgagaaacgtgatctaaatataaataaatctgagtatatgg
tgagacaaaccgataaacagcaaagaggctggaagattttgccaaatcca
agaactctggaataaaaatcgagaaaatgtgtatattagatatttctatt
ctgtttcatcttggatggcttagagagagtgttggttttttaagtagccc
atttcttctgtgaacctgttggtggccatctaggtctagaggcaacttct
tttttcatagcctataattctcctttgattgaaatagtattgtttgctgc
actcatgcctattttcattagatgccaacaagagggcatgatgagattgg
tctctctccctctcccttctctctgcctcttctctctctttctctctctt
tgttgaattgaaagcatccaatcaaaagcaagaggattaataattttaga
agctgaatcatgagcacaacaactattcataataatcttcttcttttata
tatgctaagaagttttaataacaaggttttaaagacatctctgaggctga
tacttcaatgtttacttccctcctttctgtacagctaaagtgtcagcagc
agggttacttttttatgaaaccaatgaatattaattgtcatagactatca
ctagcataggccccaagttgatggaagtgtctaagtgatagtcacaatct
tttgtgaaagccacaaatgtaatgcacccagaacacaattggttgagggc
atcatctctatttagcatttactacttagtactctatttagtatttagta
cttatgccctgttgtaagactctgacgagccttaactaccagagactctc
tgagtgagccatgtggagctggggaatcaatgcaaagcaagaggagttta
ttatttcagagtgctggggtcgtcctgcaccccaaaggagaggtggtcat
ctcaagcagcctgttcggccagttttttattagtttttcaggggtgaata
ccgcacagccactaggcatacactgattggacggaacggtgtgactttta
ctcgattggttttagggaaggaggtgtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_34258783_34259532
seq2: B6Ng01-105L15.b_43_792

seq1  GAATTCTCCGCAGATCCCTTTACCACTAACTGACCCACACTGCTCTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGCAGATCCCTTTACCACTAACTGACCCACACTGCTCTCTTA  50

seq1  GGCCCCATTCTCCTCTAACCTTAGCTCTGTTCAGTCAAGCTCCTGGTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCATTCTCCTCTAACCTTAGCTCTGTTCAGTCAAGCTCCTGGTGGC  100

seq1  CTCCCTGCTGAAGTCGCTGGCACTGGATCAGGATAGTGATCAGAGTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGCTGAAGTCGCTGGCACTGGATCAGGATAGTGATCAGAGTCCTT  150

seq1  TAAGACAAGGTCTCTAACATCCTGACCCAGGGTGGGGCTTGTGATCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAAGGTCTCTAACATCCTGACCCAGGGTGGGGCTTGTGATCTTCT  200

seq1  GGGAAGCATATTAACAAACATCCACCCAGCTAGGTTGTGCTGGATTCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCATATTAACAAACATCCACCCAGCTAGGTTGTGCTGGATTCAGG  250

seq1  GCAGAGACGACAGTAACAAAATTCAGGTTACTGAAACAAAAGCACATCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGACGACAGTAACAAAATTCAGGTTACTGAAACAAAAGCACATCAC  300

seq1  ATTTATTTAGTATTTAATCTTTAATATTCTACACGTGCACACGGTGGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTAGTATTTAATCTTTAATATTCTACACGTGCACACGGTGGGTG  350

seq1  TGTGAGGGACTCCTTCATTCATACACTCAGAAGTTTCTCATCGCTGGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGGACTCCTTCATTCATACACTCAGAAGTTTCTCATCGCTGGTCC  400

seq1  CAGCCCCTCTTCCCACTCACCTCAAACCCCATTGGTATCACCCTCACTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCTCTTCCCACTCACCTCAAACCCCATTGGTATCACCCTCACTGT  450

seq1  CCTCTCCAGCATCTTGAAATCTCTCCTGGTCGTTTGTTTTACACTGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCAGCATCTTGAAATCTCTCCTGGTCGTTTGTTTTACACTGTTTC  500

seq1  TATCCCAGGGTACAAACTCTTAGACTTTCCTTATTCCTCACGTCTGCGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCAGGGTACAAACTCTTAGACTTTCCTTATTCCTCACGTCTGCGTT  550

seq1  CCCTGGGAGGAGAACAACTTTCAGAAGCTCACAAACCCTACCCTGGCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGAGGAGAACAACTTTCAGAAGCTCACAAACCCTACCCTGGCCCA  600

seq1  GGACATTAGAGACCTAGTCTTCAAATTCCATTTATTCTACGGTTAGGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTAGAGACCTAGTCTTCAAATTCCATTTATTCTACGGTTAGGATG  650

seq1  TGAAAATCGCTGAAGGGATGTGGTGGCACCTGCCTTTAATCCCAGCACTT  700
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGAAAATCGCTGAAGGGATGTGGTGGCACCTGCCTTTAATCCTAGCACTT  700

seq1  GAGAGGCAGAGGCAGGCAGATTTCTGAGTTCG-AGGCCAGCCTGGTCTAC  749
      |||||||| |||||||||||||||||| |||| |||||||||||||||||
seq2  GAGAGGCATAGGCAGGCAGATTTCTGA-TTCGAAGGCCAGCCTGGTCTAC  749

seq1  A  750
      |
seq2  A  750

seq1: chr18_34373782_34374914
seq2: B6Ng01-105L15.g_68_1197 (reverse)

seq1  TACA-ACCTCATTCCCTAAAAACCAATCAGTTTAAAAGTCACACTGTTCT  49
      |||| ||||| |||||| |||||||||| |  |||||||||||| |||| 
seq2  TACACACCTCCTTCCCT-AAAACCAATC-GAGTAAAAGTCACACCGTTCC  48

seq1  GT-CAATCATGTTATGCCTAGTTGCTGTTGCTGTATTCTACCCCTGAAAA  98
      || ||||||   |||||||||| |||| ||| |||||| |||||||||||
seq2  GTCCAATCAGTGTATGCCTAGTGGCTG-TGCGGTATTC-ACCCCTGAAAA  96

seq1  ACTATATAAAAAACTGGCCGAACAGGCTGCCTGAGATGGCCACCTCTCCT  148
      |||| ||||||||||||||||||||||||| ||||||| |||||||||||
seq2  ACTA-ATAAAAAACTGGCCGAACAGGCTGCTTGAGATGACCACCTCTCCT  145

seq1  TT-GGGTGCAGGACGACCCCAGCACTCTGGAATAATAAACTCCTCTTGCT  197
      || |||||||||||||||||||||||||| ||||||||||||||||||| 
seq2  TTGGGGTGCAGGACGACCCCAGCACTCTGAAATAATAAACTCCTCTTGC-  194

seq1  TTTGCATTGATTCCCCAGCTCCACATGGCTCACTCAGAGGGTCTCTGGTA  247
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTTGCATTGATTCCCCAGCTCCACATGGCTCACTCAGAGAGTCTCTGGTA  244

seq1  GTTAAGGCTCGTCAGAGTCTTACAACAGGGCATAAGTACTAAATACTAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGGCTCGTCAGAGTCTTACAACAGGGCATAAGTACTAAATACTAAA  294

seq1  TAGAGTACTAAGTAGTAAATGCTAAATAGAGATGATGCCCTCAACCAATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTACTAAGTAGTAAATGCTAAATAGAGATGATGCCCTCAACCAATT  344

seq1  GTGTTCTGGGTGCATTACATTTGTGGCTTTCACAAAAGATTGTGACTATC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTGGGTGCATTACATTTGTGGCTTTCACAAAAGATTGTGACTATC  394

seq1  ACTTAGACACTTCCATCAACTTGGGGCCTATGCTAGTGATAGTCTATGAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGACACTTCCATCAACTTGGGGCCTATGCTAGTGATAGTCTATGAC  444

seq1  AATTAATATTCATTGGTTTCATAAAAAAGTAACCCTGCTGCTGACACTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATATTCATTGGTTTCATAAAAAAGTAACCCTGCTGCTGACACTTT  494

seq1  AGCTGTACAGAAAGGAGGGAAGTAAACATTGAAGTATCAGCCTCAGAGAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTACAGAAAGGAGGGAAGTAAACATTGAAGTATCAGCCTCAGAGAT  544

seq1  GTCTTTAAAACCTTGTTATTAAAACTTCTTAGCATATATAAAAGAAGAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTAAAACCTTGTTATTAAAACTTCTTAGCATATATAAAAGAAGAAG  594

seq1  ATTATTATGAATAGTTGTTGTGCTCATGATTCAGCTTCTAAAATTATTAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATGAATAGTTGTTGTGCTCATGATTCAGCTTCTAAAATTATTAA  644

seq1  TCCTCTTGCTTTTGATTGGATGCTTTCAATTCAACAAAGAGAGAGAAAGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGCTTTTGATTGGATGCTTTCAATTCAACAAAGAGAGAGAAAGA  694

seq1  GAGAGAAGAGGCAGAGAGAAGGGAGAGGGAGAGAGACCAATCTCATCATG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAGAGGCAGAGAGAAGGGAGAGGGAGAGAGACCAATCTCATCATG  744

seq1  CCCTCTTGTTGGCATCTAATGAAAATAGGCATGAGTGCAGCAAACAATAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTGTTGGCATCTAATGAAAATAGGCATGAGTGCAGCAAACAATAC  794

seq1  TATTTCAATCAAAGGAGAATTATAGGCTATGAAAAAAGAAGTTGCCTCTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAATCAAAGGAGAATTATAGGCTATGAAAAAAGAAGTTGCCTCTA  844

seq1  GACCTAGATGGCCACCAACAGGTTCACAGAAGAAATGGGCTACTTAAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAGATGGCCACCAACAGGTTCACAGAAGAAATGGGCTACTTAAAAA  894

seq1  ACCAACACTCTCTCTAAGCCATCCAAGATGAAACAGAATAGAAATATCTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACACTCTCTCTAAGCCATCCAAGATGAAACAGAATAGAAATATCTA  944

seq1  ATATACACATTTTCTCGATTTTTATTCCAGAGTTCTTGGATTTGGCAAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACATTTTCTCGATTTTTATTCCAGAGTTCTTGGATTTGGCAAAA  994

seq1  TCTTCCAGCCTCTTTGCTGTTTATCGGTTTGTCTCACCATATACTCAGAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAGCCTCTTTGCTGTTTATCGGTTTGTCTCACCATATACTCAGAT  1044

seq1  TTATTTATATTTAGATCACGTTTCTCAAATGTTTATTAAATATGATAGCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATATTTAGATCACGTTTCTCAAATGTTTATTAAATATGATAGCT  1094

seq1  AAATTTATATATCGAGTTAACTAGGTTATGGAATTC  1133
      ||||||||||||||||||||||||||||||||||||
seq2  AAATTTATATATCGAGTTAACTAGGTTATGGAATTC  1130