BAC Information

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BAC

Clone NameB6Ng01-106F17
Chromosome18 (Build37)
Map Location 14,187,687 - 14,188,869
singlet/doubletsinglet
Overlap geneLOC100040094
Upstream geneEG383354, LOC665379, LOC100040358, Zfp521
Downstream geneLOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1, EG622268
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106F17.bB6Ng01-106F17.g
ACCDH914122DH914123
length7131,156
definitionDH914122|Mus musculus domesticus DNA, BAC clone: B6Ng01-106F17, 5' end.DH914123|Mus musculus domesticus DNA, BAC clone: B6Ng01-106F17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatctcaaatggctgagaagcacttaaatgttct
acatccttagacagtgaaatgcaaatctaaacagccctgagattccacct
cacaccagtcagaatggctaagattaaaaattcaggtgacagcagatgct
ggtgggaacgtggaaaaagggaaacactcctccattgctggtgggattgc
aagctggtacagccactctggaagtcagtctggtggttcttcagaaaatt
ggaaatagttctaccagctataccactcctgggcatgtatccaaatgata
ctccaacatataacaaggacatacattccactgtgttcttagcagtctta
tttataatagccagaagctggaaacaacccagatgtccctcaacagagga
atggatacagaaaatttgatacatttacacagtggaatactactcagcta
catgacttcataagatttgcagggaaatggatggaattagaagatatctt
cctgagtgaggtaacccagtcacaaaagaacacacatggtacgtactcac
tgataagccaacatagaagcctggaatacccatgacacaactcacagacc
atatgaaacccaagaaagaaagaaaactacaccaaagtgtgggtgcgaca
gtacagagtaaagagaatcaactctgggaagtaaagagagagggggagga
tctgggagggaga

gaattcagtgcactcagtaaaaccatgcaaatggctaacagtgagtctaa
ccaccaccaactttgagatgtgggaagtgtgtcacagagacatcaaaagc
atggccaaagcattctggcactttgatccagagcacatgggtcaagggcc
aaagttgtgaccgtggtcaatggcaccagggaacaagagtcacatgcagt
cccaacattgtatagcaagaagggtttcactgaggtaaaaggcaggcaaa
tatgtaatttttttttctataaagaagctgggaaggcagattcaggcatt
cattcataagtattcactttattggcttcatggcagtttctaacttaaca
acatcattatgttgatttagaaaatacttcttaaccttaaacttcaacaa
aaagtctactctgactcatatcctattatagagatctagcaaattataca
agcaaatgttccatgtgcagtaagagtgctccacacaataaatggaaatg
tgagatggactcctcacgatggaaatgtgagatgatttactgcagtgttg
aaatagtgaggcattagtagaaacctctgtagtcttcaagtctacaaaat
cgacttttccttcagtctagcgatctgtttcttttaaaaagtatctctgt
gagcatgatattaattttacttttacattttagcttcataatgtacaatc
atcttttctataaagtaaaggtaaagagaggttgcacactcctgtgtcta
ctgttgggagggagacaagtaattataactgcagcaggtgagagtgggag
acaggcattggggtcagaactccaactggataagaggtgaccgtgacaga
accagggactttctgacttggggaaagcacagtaatgtggaatagggtgg
aaatggatagcaaggaagaataaagccttattttagtcatggaaaaaata
gttgagtagtttcatgaaattcaagtcatttatacactagctgatttagc
acttgagccatttcagtgagaagatacgaagtaggagtttcagctacagg
agctgtactctatgaattggctagcagagtgacaaatagaatgatcttat
gtctttgaacatgacgaaagcagcatgaaataaatgtgcttggcaataaa
aatcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14187687_14188869
seq2: B6Ng01-106F17.g_69_1224

seq1  GAATTCAGTGCACTCAGTAAAACCATGCAAATGGCTAACAGTGAGTCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGCACTCAGTAAAACCATGCAAATGGCTAACAGTGAGTCTAA  50

seq1  CCACCACCAACTTTGAGATGTGGGAAGTGTGTCACAGAGACATCAAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCAACTTTGAGATGTGGGAAGTGTGTCACAGAGACATCAAAAGC  100

seq1  ATGGCCAAAGCATTCTGGCACTTTGATCCAGAGCACATGGGTCAAGGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCAAAGCATTCTGGCACTTTGATCCAGAGCACATGGGTCAAGGGCC  150

seq1  AAAGTTGTGACCGTGGTCAATGGCACCAGGGAACAAGAGTCACATGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGTGACCGTGGTCAATGGCACCAGGGAACAAGAGTCACATGCAGT  200

seq1  CCCAACATTGTATAGCAAGAAGGGTTTCACTGAGGTAAAAGGCAGGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACATTGTATAGCAAGAAGGGTTTCACTGAGGTAAAAGGCAGGCAAA  250

seq1  TATGTAATTTTTTTTTCTATAAAGAAGCTGGGAAGGCAGATTCAGGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAATTTTTTTTTCTATAAAGAAGCTGGGAAGGCAGATTCAGGCATT  300

seq1  CATTCATAAGTATTCACTTTATTGGCTTCATGGCAGTTTCTAACTTAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATAAGTATTCACTTTATTGGCTTCATGGCAGTTTCTAACTTAACA  350

seq1  ACATCATTATGTTGATTTAGAAAATACTTCTTAACCTTAAACTTCAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATTATGTTGATTTAGAAAATACTTCTTAACCTTAAACTTCAACAA  400

seq1  AAAGTCTACTCTGACTCATATCCTATTATAGAGATCTAGCAAATTATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTACTCTGACTCATATCCTATTATAGAGATCTAGCAAATTATACA  450

seq1  AGCAAATGTTCCATGTGCAGTAAGAGTGCTCCACACAATAAATGGAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATGTTCCATGTGCAGTAAGAGTGCTCCACACAATAAATGGAAATG  500

seq1  TGAGATGGACTCCTCACGATGGAAATGTGAGATGATTTACTGCAGTGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGGACTCCTCACGATGGAAATGTGAGATGATTTACTGCAGTGTTG  550

seq1  AAATAGTGAGGCATTAGTAGAAACCTCTGTAGTCTTCAAGTCTACAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTGAGGCATTAGTAGAAACCTCTGTAGTCTTCAAGTCTACAAAAT  600

seq1  CGACTTTTCCTTCAGTCTAGCGATCTGTTTCTTTTAAAAAGTATCTCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTTTTCCTTCAGTCTAGCGATCTGTTTCTTTTAAAAAGTATCTCTGT  650

seq1  GAGCATGATATTAATTTTACTTTTACATTTTAGCTTCATAATGTACAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGATATTAATTTTACTTTTACATTTTAGCTTCATAATGTACAATC  700

seq1  ATCTTTTCTATAAAGTAAAGGTAAAGAGAGGTTGCACACTCCTGTGTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTCTATAAAGTAAAGGTAAAGAGAGGTTGCACACTCCTGTGTCTA  750

seq1  CTGTTGGGAGGGAGACAAGTAATTATAACTGCAGCAGGTGAGAGTGGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGGAGGGAGACAAGTAATTATAACTGCAGCAGGTGAGAGTGGGAG  800

seq1  ACAGGCATTGGGGTCAGAACTCCAACTGGATAAGAGGTGACCGTGACAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCATTGGGGTCAGAACTCCAACTGGATAAGAGGTGACCGTGACAGA  850

seq1  ACCAGGGACTTTCTGACTTGGGGAAAGCAACAGTAATGTGGAATAGGGTG  900
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACCAGGGACTTTCTGACTTGGGGAAAGC-ACAGTAATGTGGAATAGGGTG  899

seq1  GAAATGGATAGCAAGGAAGAATAAAGCCTTATTTTAGTCATGGAAAAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGATAGCAAGGAAGAATAAAGCCTTATTTTAGTCATGGAAAAAAT  949

seq1  AGTTGAGTAGTTTCATGAAAATTCAAGTCAATTTATTACACTAGCTGAAT  1000
      ||||||||||||||||| ||||||||||| ||||| ||||||||||| ||
seq2  AGTTGAGTAGTTTCATG-AAATTCAAGTC-ATTTA-TACACTAGCTG-AT  995

seq1  TTAGCACTTGAGCCATTTCAGTGAGAAGATACAGAGTAAGAAGTTTCAGC  1050
      ||||||||||||||||||||||||||||||||  ||| || |||||||| 
seq2  TTAGCACTTGAGCCATTTCAGTGAGAAGATACGAAGT-AGGAGTTTCAG-  1043

seq1  CTACAAGGAGCTGTACTCTATGAATTTGGCATAAGCAGAAGTTGACAAAT  1100
      |||| ||||||||||||||||||| |||||   ||||||   ||||||||
seq2  CTAC-AGGAGCTGTACTCTATGAA-TTGGC--TAGCAGA--GTGACAAAT  1087

seq1  AAGAATGAGTCCTTATGTTCATAGAAACAAATGACAGAAAGCAGCATTGA  1150
       |||||||   |||||| || | ||   | ||||| |||||||||| |||
seq2  -AGAATGA--TCTTATG-TCTTTGA---ACATGAC-GAAAGCAGCA-TGA  1128

seq1  AAAATAAAATGTGCTTGCCATTAAAAAAATCTA  1183
      ||    ||||||||||| ||  | |||||||||
seq2  AA---TAAATGTGCTTGGCA--ATAAAAATCTA  1156


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