BAC Information

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BAC

Clone NameB6Ng01-107J07
Chromosome18 (Build37)
Map Location 32,956,469 - 33,101,658
singlet/doubletdoublet
Overlap geneTslp, Wdr36, Camk4
Upstream geneEG626327, Wdr33, Sft2d3, Lims2, Gpr17, Myo7b, Iws1, Proc, LOC546710, Map3k2, Ercc3, Bin1, Gypc, LOC100041160, LOC100041170
Downstream geneStard4, EG433170, D0H4S114, ENSMUSG00000073610, LOC666281, LOC100041258, Epb4.1l4a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107J07.bB6Ng01-107J07.g
ACCDH915009DH915010
length553985
definitionDH915009|Mus musculus domesticus DNA, BAC clone: B6Ng01-107J07, 5' end.DH915010|Mus musculus domesticus DNA, BAC clone: B6Ng01-107J07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,956,469 - 32,957,026)(33,100,678 - 33,101,658)
sequence
acaaaaaaattataaaagaagaaaccaagaatttaatgagaaaatgtctc
tgaataccattttatactatttgaacttttactgggtactaataatttcc
atttgaaatcaaagtaattattttcttagtaaaggaatataaaggtgatt
agaatgatgtcagttatatatgaatcagtttaatcttttctatctcataa
atttccctttcctgatctagctagaagcagaggtgatcagtttatttctt
ctgaattagcaattgccagatctatgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgctgttatatcacatattgttattgtacagatctaccctat
catttcagcagatttcttttgactctggtttttgtttttgttagcattgg
ttcttgttatgtcaactgaattaataattgggtcctttcagaactctcca
ttctagctcctgggattttcctgggactgattcatattctacctaattca
aaacacatcttcctgtgagtactttgattagcatgggtaacagccttttc
ctt
gaattcaggagtcacccatttataacagacagttttaatagatgaaacaa
gtctctaattcatctaaagggggttgtctacactgtgaactggaccattt
aaaggggactattctcactgtgaaccagttcatctaaagggggctgtctg
cactgtgacacagtgcccctcacagcataagactgctgctgtctgagcac
tgacatactgacaactgtgcaggagggagtcatgtgatttggctttaagt
caccattgcgccccacccccaccccccgccacccctgccccagcctgggt
ctggcccaaaacagaaagaaaaatgttgagatcaatccaagtgagttcaa
attgatcactagtgcacaaagcacttgggcttctgtgcctcaaacactgt
gcacatttattgagttttattgagttctggttctagatattagaaacaaa
aacaatgacagctgaaatatcagtcggttcttattttaagtttattccat
tgaaaaaaaatcacttagattatgaagtgaaattagttctccagcttaac
caagtggcacaaccccactgctcaccaacactgccatctacagagagctt
acccagcaacacaaggtcctgctggagaacggagcagaagtacagctctg
agtggttctgcttttcttgctaaaatattgtaatctggtgattgtagggt
aataaaatatatatatatgtagcaggacaagtcttcgaaatttataatag
atgtatatgcacaaccccaattgaattggagaactgtagggccaaattaa
aaacaagcaaactttcaaactcccttccctgggagattcccccatcccgt
gcatgtgaacactctgaggtgttccctgtaaatctttcccacatctcaag
cgttggcatgacggagaggcttattttttgaattaacaagtcagaacctg
taaggggcttctggggcgttgtgccgatgtgctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_32956469_32957026
seq2: B6Ng01-107J07.b_46_604

seq1  GAATTCACAAAAAAATTATAAAAGAAGAAACCAAGAATTTAATGAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAAAAAATTATAAAAGAAGAAACCAAGAATTTAATGAGAAAA  50

seq1  TGTCTCTGAATACCATTTTATACTATTTGAACTTTTACTGGGTACTAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGAATACCATTTTATACTATTTGAACTTTTACTGGGTACTAATA  100

seq1  ATTTCCATTTGAAATCAAAGTAATTATTTTCTTAGTAAAGGAATATAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATTTGAAATCAAAGTAATTATTTTCTTAGTAAAGGAATATAAAG  150

seq1  GTGATTAGAATGATGTCAGTTATATATGAATCAGTTTAATCTTTTCTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTAGAATGATGTCAGTTATATATGAATCAGTTTAATCTTTTCTATC  200

seq1  TCATAAATTTCCCTTTCCTGATCTAGCTAGAAGCAGAGGTGATCAGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAATTTCCCTTTCCTGATCTAGCTAGAAGCAGAGGTGATCAGTTTA  250

seq1  TTTCTTCTGAATTAGCAATTGCCAGATCTATGTGTGTGTGTGTGTGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTGAATTAGCAATTGCCAGATCTATGTGTGTGTGTGTGTGTGTG  300

seq1  TGTGTGTGTGTGTGTGCTGTTATATCACATATTGTTATTGTACAGATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGCTGTTATATCACATATTGTTATTGTACAGATCTA  350

seq1  CCCTATCATTTCAGCAGATTTCTTTTGACTCTGGTTTTTGTTTTTGTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATCATTTCAGCAGATTTCTTTTGACTCTGGTTTTTGTTTTTGTTAG  400

seq1  CATTGGTTCTTGTTATGTCAACTGAATTAATAATTGGGTCCTTTCAGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGTTCTTGTTATGTCAACTGAATTAATAATTGGGTCCTTTCAGAAC  450

seq1  TCTCCATTCTAGCTCCTGGGATTTTCCTGGGACTGATTCATATTCTACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTCTAGCTCCTGGGATTTTCCTGGGACTGATTCATATTCTACCT  500

seq1  AATTCAAAACACATCTTCCTGTGAGTAC-TTGATTAGCATGGGTAACAGC  549
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AATTCAAAACACATCTTCCTGTGAGTACTTTGATTAGCATGGGTAACAGC  550

seq1  CTTTTCCTT  558
      |||||||||
seq2  CTTTTCCTT  559

seq1: chr18_33100678_33101658
seq2: B6Ng01-107J07.g_66_1050 (reverse)

seq1  ACAGCACATCGGCACAACGCCCCAGAAGCCCCTAACAGGTTCTGACTTGT  50
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACAGCACATCGGCACAACGCCCCAGAAGCCCCTTACAGGTTCTGACTTGT  50

seq1  TAATTC-AAAAATAAGCCTCTCCGTCATGCCAAACGCTTGAGATGTGGG-  98
      |||||| |||||||||||||||||||||||| ||||||||||||||||| 
seq2  TAATTCAAAAAATAAGCCTCTCCGTCATGCC-AACGCTTGAGATGTGGGA  99

seq1  AAGATTTACAGGGAACACCTCAGAGTGTTCACATGCACGGGATGGGGGAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTACAGGGAACACCTCAGAGTGTTCACATGCACGGGATGGGGGAA  149

seq1  TCTCCCAGGGAA-GGAGTTTG-AAGTTTGCTTGTTTTTAATTTGGCCCTA  196
      |||||||||||| |||||||| ||||||||||||||||||||||||||||
seq2  TCTCCCAGGGAAGGGAGTTTGAAAGTTTGCTTGTTTTTAATTTGGCCCTA  199

seq1  CAGTTCTCC-ATTCAATTGGGGTTGTGCATATACATCTATTATAAATTTC  245
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTCCAATTCAATTGGGGTTGTGCATATACATCTATTATAAATTTC  249

seq1  GAAGACTTGTCCTGCTACATATATATATATTTTATTACCCTACAATCACC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTTGTCCTGCTACATATATATATATTTTATTACCCTACAATCACC  299

seq1  AGATTACAATATTTTAGCAAGAAAAGCAGAACCACTCAGAGCTGTACTTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACAATATTTTAGCAAGAAAAGCAGAACCACTCAGAGCTGTACTTC  349

seq1  TGCTCCGTTCTCCAGCAGGACCTTGTGTTGCTGGGTAAGCTCTCTGTAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCGTTCTCCAGCAGGACCTTGTGTTGCTGGGTAAGCTCTCTGTAGA  399

seq1  TGGCAGTGTTGGTGAGCAGTGGGGTTGTGCCACTTGGTTAAGCTGGAGAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTGTTGGTGAGCAGTGGGGTTGTGCCACTTGGTTAAGCTGGAGAA  449

seq1  CTAATTTCACTTCATAATCTAAGTGATTTTTTTTCAATGGAATAAACTTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTCACTTCATAATCTAAGTGATTTTTTTTCAATGGAATAAACTTA  499

seq1  AAATAAGAACCGACTGATATTTCAGCTGTCATTGTTTTTGTTTCTAATAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGAACCGACTGATATTTCAGCTGTCATTGTTTTTGTTTCTAATAT  549

seq1  CTAGAACCAGAACTCAATAAAACTCAATAAATGTGCACAGTGTTTGAGGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACCAGAACTCAATAAAACTCAATAAATGTGCACAGTGTTTGAGGC  599

seq1  ACAGAAGCCCAAGTGCTTTGTGCACTAGTGATCAATTTGAACTCACTTGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGCCCAAGTGCTTTGTGCACTAGTGATCAATTTGAACTCACTTGG  649

seq1  ATTGATCTCAACATTTTTCTTTCTGTTTTGGGCCAGACCCAGGCTGGGGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCTCAACATTTTTCTTTCTGTTTTGGGCCAGACCCAGGCTGGGGC  699

seq1  AGGGGTGGCGGGGGGTGGGGGTGGGGCGCAATGGTGACTTAAAGCCAAAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGGCGGGGGGTGGGGGTGGGGCGCAATGGTGACTTAAAGCCAAAT  749

seq1  CACATGACTCCCTCCTGCACAGTTGTCAGTATGTCAGTGCTCAGACAGCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGACTCCCTCCTGCACAGTTGTCAGTATGTCAGTGCTCAGACAGCA  799

seq1  GCAGTCTTATGCTGTGAGGGGCACTGTGTCACAGTGCAGACAGCCCCCTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCTTATGCTGTGAGGGGCACTGTGTCACAGTGCAGACAGCCCCCTT  849

seq1  TAGATGAACTGGTTCACAGTGAGAATAGTCCCCTTTAAATGGTCCAGTTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAACTGGTTCACAGTGAGAATAGTCCCCTTTAAATGGTCCAGTTC  899

seq1  ACAGTGTAGACAACCCCCTTTAGATGAATTAGAGACTTGTTTCATCTATT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTAGACAACCCCCTTTAGATGAATTAGAGACTTGTTTCATCTATT  949

seq1  AAAACTGTCTGTTATAAATGGGTGACTCCTGAATTC  981
      ||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTCTGTTATAAATGGGTGACTCCTGAATTC  985