BAC Information

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BAC

Clone NameB6Ng01-107O21
Chromosome18 (Build37)
Map Location 13,564,679 - 13,734,029
singlet/doubletdoublet
Overlap genenone
Upstream geneLama3, 2810439F02Rik, Cabyr, LOC665356, Osbpl1a, LOC435556, Impact, Hrh4, EG383354, LOC665379
Downstream geneLOC100040358, Zfp521, LOC100040094, LOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107O21.bB6Ng01-107O21.g
ACCDH915254DH915255
length9941,105
definitionDH915254|Mus musculus domesticus DNA, BAC clone: B6Ng01-107O21, 5' end.DH915255|Mus musculus domesticus DNA, BAC clone: B6Ng01-107O21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,564,679 - 13,565,391)(13,732,938 - 13,734,029)
sequence
gaattccaagctggccggactgtttgctgacatgtgtttctgtcccgttg
cttttttcttctttgcatgtattgctgccctctgaatatgacatgatttt
tgctcatgttttcttcacttatactggggatacaaaagattttatctcac
ggcttccatttagttttggagataaaacacttgagaaaaatgacacactt
gagaaaaatgacagagtccatcagaatacagcagatagtcctagatggct
atgtacattcacagaggaagacagtggtctaggatcaggtcaacaacact
gaaccagaaggaagggtcttccatgctgagcctcacttatgttatctgta
aaatggtgatgaagccctctctgatgctcttggagcaagtgtgtgggttc
agtgccttgagagtattttctaatgcacaacacacatgtacccttaatac
agcgtgactcacgaaataagcccagagtactctagaccagccttttggcc
gcaatcagaatgcttgtttgtttttctctgtcctcatgtgtacaattcat
gccttttctatctcaagtaagcactcttgtacaacttttaaattttaaga
caggaagcaaaactaccttgaagttccctttccctctccacgtgtccttg
attaaaaggtctttcttactttacgtcctagctgtctccacttacattta
tcttgtcctgtttctgtcaagaattttcctgtaagttaagtatttcccag
catctcttgggaatgtttgcattgccactagatgctctgggacagttagt
aagaaaaacaagtcgaatgcaagcacgcagaaccacagccacccatgtga
taatcaagatggatgctaactgtgggcaggtaacacttgaagtatgcatc
tgttggatgagacttaccctgggcagcaggagaggcccgcagccagcagc
atggtgtgcagtttaaaacttacaaggtggtgtttgttttgttt
gaattccagactcttgaacaaattacaataaaatgctggcgtggtgaaaa
cacaaaggagcagagctctgcatctccacagggcgctgtgggagaaaagc
agataaggcagagaggaaggtaggttaggatgcttgctgatgtagaatcc
tctgcaactactgctgggccagcccagatctaaaagcgtcctgggtggtt
aacctttgctcttcctgggttgcgcatgaagcctcttgtctttataaatt
tatgtcctcattttaggtggctggagggagggcagagtctccctgtgccc
gcatcttctcacttgctttcagctctgtaatctttcctattttcgtatgg
cctcttctggttctgcacatgacttaaaacaaatgacaaggtcaaaccca
aacctactgtcccacacactgttattagaaccccaagtatcatgagatca
tgacgtcagactcagagccataaatttcttgggctaaatcaaggatttct
tgggtttaagtgggtcacatggtgaaagggacttagccactcctctgtga
aaagaaggactgggagagccatagctgccactacaacatagtaagtgtgg
gtgtctacaggtcagatgatgatgggcatcctcttcctgggaagggattt
aagtttttaatagtagcctataaagtaatgagtttcatcatggcactatt
ttgtttttcgagataggatctcaagagcctctgtctaacccagatctcta
gaataaacatgaatttctggtcttcctgcctctacctcccagatgctgag
atcacaggctgcatgttcagtttcatgtggtactggcgactgaacctggg
gacttgctgtacgcttgggaaggcactcttcttcctctcactccccacag
tgaaattttcatacattgcttaaagttccctcacttcctggtggcccttc
ttttgctgcccaccatttcttctcccattcctcttttaatcccctctcca
acccttccgtaaggattcttctccactacaggcatagttggtgggcagcc
atctaacaccagggaaggcaagaggcaaggcagaatctttggggagttgg
gaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_13564679_13565391
seq2: B6Ng01-107O21.b_46_758

seq1  GAATTCCAAGCTGGCCGGACTGTTTGCTGACATGTGTTTCTGTCCCGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCTGGCCGGACTGTTTGCTGACATGTGTTTCTGTCCCGTTG  50

seq1  CTTTTTTCTTCTTTGCATGTATTGCTGCCCTCTGAATATGACATGATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTCTTCTTTGCATGTATTGCTGCCCTCTGAATATGACATGATTTT  100

seq1  TGCTCATGTTTTCTTCACTTATACTGGGGATACAAAAGATTTTATCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATGTTTTCTTCACTTATACTGGGGATACAAAAGATTTTATCTCAC  150

seq1  GGCTTCCATTTAGTTTTGGAGATAAAACACTTGAGAAAAATGACACACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCCATTTAGTTTTGGAGATAAAACACTTGAGAAAAATGACACACTT  200

seq1  GAGAAAAATGACAGAGTCCATCAGAATACAGCAGATAGTCCTAGATGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAATGACAGAGTCCATCAGAATACAGCAGATAGTCCTAGATGGCT  250

seq1  ATGTACATTCACAGAGGAAGACAGTGGTCTAGGATCAGGTCAACAACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACATTCACAGAGGAAGACAGTGGTCTAGGATCAGGTCAACAACACT  300

seq1  GAACCAGAAGGAAGGGTCTTCCATGCTGAGCCTCACTTATGTTATCTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGAAGGAAGGGTCTTCCATGCTGAGCCTCACTTATGTTATCTGTA  350

seq1  AAATGGTGATGAAGCCCTCTCTGATGCTCTTGGAGCAAGTGTGTGGGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTGATGAAGCCCTCTCTGATGCTCTTGGAGCAAGTGTGTGGGTTC  400

seq1  AGTGCCTTGAGAGTATTTTCTAATGCACAACACACATGTACCCTTAATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTTGAGAGTATTTTCTAATGCACAACACACATGTACCCTTAATAC  450

seq1  AGCGTGACTCACGAAATAAGCCCAGAGTACTCTAGACCAGCCTTTTGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGACTCACGAAATAAGCCCAGAGTACTCTAGACCAGCCTTTTGGCC  500

seq1  GCAATCAGAATGCTTGTTTGTTTTTCTCTGTCCTCATGTGTACAATTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCAGAATGCTTGTTTGTTTTTCTCTGTCCTCATGTGTACAATTCAT  550

seq1  GCCTTTTCTATCTCAAGTAAGCACTCTTGTACAACTTTTAAATTTTAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTCTATCTCAAGTAAGCACTCTTGTACAACTTTTAAATTTTAAGA  600

seq1  CAGGAAGCAAAACTACCTTGAAGTTCCCTTTCCCTCTCCACGTGTCCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGCAAAACTACCTTGAAGTTCCCTTTCCCTCTCCACGTGTCCTTG  650

seq1  ATTAAAAGGTCTTTCTTACTTTACGTCCTAGCTGTCTCCACTTACATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAGGTCTTTCTTACTTTACGTCCTAGCTGTCTCCACTTACATTTA  700

seq1  TCTTGTCCTGTTT  713
      |||||||||||||
seq2  TCTTGTCCTGTTT  713

seq1: chr18_13732938_13734029
seq2: B6Ng01-107O21.g_68_1172 (reverse)

seq1  GCCT-CCAACT-CACAAAGA-TCTGCC-TGCCTC-TGCC-TCCCTGGTGT  44
      |||| |||||| | |||||| |||||| |||||| |||| ||||||||||
seq2  GCCTCCCAACTCCCCAAAGATTCTGCCTTGCCTCTTGCCTTCCCTGGTGT  50

seq1  TAAGATGGTTG-CCACCAACTATGCCTGTAGTGAAGAAGAAATCTTAAGG  93
      | |||||| || ||||||||||||||||||||| |||||||  |||| ||
seq2  T-AGATGGCTGCCCACCAACTATGCCTGTAGTGGAGAAGAATCCTTACGG  99

seq1  GAAGGTTGGAGAGGGGATAAAAAAGAGGAAAGGGAGAAGAAAT-GTGGGC  142
       | |||||||||||||||  |||||||||| |||||||||||| ||||||
seq2  AAGGGTTGGAGAGGGGAT-TAAAAGAGGAATGGGAGAAGAAATGGTGGGC  148

seq1  AGCAAA--GAGGGCCACCAGGAAGTGAGGGACTTAAAAGCAATGTATGAA  190
      ||||||   ||||||||||||||||||||||  |  ||||||||||||||
seq2  AGCAAAAGAAGGGCCACCAGGAAGTGAGGGAACTTTAAGCAATGTATGAA  198

seq1  AATTTCACTGTGGGG-GTGAGAGGAAG-AGAGTGCCTTCCC-AGCGTACA  237
      ||||||||||||||| ||||||||||| ||||||||||||| ||||||||
seq2  AATTTCACTGTGGGGAGTGAGAGGAAGAAGAGTGCCTTCCCAAGCGTACA  248

seq1  GCAAGT-CCCAGGTTCAGTCGCCAGTACCACATG-AACTGAACATGCAGC  285
      |||||| ||||||||||||||||||||||||||| |||||||||||||||
seq2  GCAAGTCCCCAGGTTCAGTCGCCAGTACCACATGAAACTGAACATGCAGC  298

seq1  CTGTGATCTCAGCATCTGGGAGGTAGAGGCAGGAAGACCAGAAATTCATG  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATCTCAGCATCTGGGAGGTAGAGGCAGGAAGACCAGAAATTCATG  348

seq1  TTTATTCTAGAGATCTGGGTTAGACAGAGGCTCTTGAGATCCTATCTCGA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTAGAGATCTGGGTTAGACAGAGGCTCTTGAGATCCTATCTCGA  398

seq1  AAAACAAAATAGTGCCATGATGAAACTCATTACTTTATAGGCTACTATTA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAATAGTGCCATGATGAAACTCATTACTTTATAGGCTACTATTA  448

seq1  AAAACTTAAATCCCTTCCCAGGAAGAGGATGCCCATCATCATCTGACCTG  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTAAATCCCTTCCCAGGAAGAGGATGCCCATCATCATCTGACCTG  498

seq1  TAGACACCCACACTTACTATGTTGTAGTGGCAGCTATGGCTCTCCCAGTC  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACCCACACTTACTATGTTGTAGTGGCAGCTATGGCTCTCCCAGTC  548

seq1  CTTCTTTTCACAGAGGAGTGGCTAAGTCCCTTTCACCATGTGACCCACTT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTCACAGAGGAGTGGCTAAGTCCCTTTCACCATGTGACCCACTT  598

seq1  AAACCCAAGAAATCCTTGATTTAGCCCAAGAAATTTATGGCTCTGAGTCT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAAGAAATCCTTGATTTAGCCCAAGAAATTTATGGCTCTGAGTCT  648

seq1  GACGTCATGATCTCATGATACTTGGGGTTCTAATAACAGTGTGTGGGACA  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTCATGATCTCATGATACTTGGGGTTCTAATAACAGTGTGTGGGACA  698

seq1  GTAGGTTTGGGTTTGACCTTGTCATTTGTTTTAAGTCATGTGCAGAACCA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTTGGGTTTGACCTTGTCATTTGTTTTAAGTCATGTGCAGAACCA  748

seq1  GAAGAGGCCATACGAAAATAGGAAAGATTACAGAGCTGAAAGCAAGTGAG  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGCCATACGAAAATAGGAAAGATTACAGAGCTGAAAGCAAGTGAG  798

seq1  AAGATGCGGGCACAGGGAGACTCTGCCCTCCCTCCAGCCACCTAAAATGA  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCGGGCACAGGGAGACTCTGCCCTCCCTCCAGCCACCTAAAATGA  848

seq1  GGACATAAATTTATAAAGACAAGAGGCTTCATGCGCAACCCAGGAAGAGC  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATAAATTTATAAAGACAAGAGGCTTCATGCGCAACCCAGGAAGAGC  898

seq1  AAAGGTTAACCACCCAGGACGCTTTTAGATCTGGGCTGGCCCAGCAGTAG  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTAACCACCCAGGACGCTTTTAGATCTGGGCTGGCCCAGCAGTAG  948

seq1  TTGCAGAGGATTCTACATCAGCAAGCATCCTAACCTACCTTCCTCTCTGC  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAGGATTCTACATCAGCAAGCATCCTAACCTACCTTCCTCTCTGC  998

seq1  CTTATCTGCTTTTCTCCCACAGCGCCCTGTGGAGATGCAGAGCTCTGCTC  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTGCTTTTCTCCCACAGCGCCCTGTGGAGATGCAGAGCTCTGCTC  1048

seq1  CTTTGTGTTTTCACCACGCCAGCATTTTATTGTAATTTGTTCAAGAGTCT  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTTTTCACCACGCCAGCATTTTATTGTAATTTGTTCAAGAGTCT  1098

seq1  GGAATTC  1092
      |||||||
seq2  GGAATTC  1105