BAC Information

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BAC

Clone NameB6Ng01-108B20
Chromosome18 (Build37)
Map Location 47,693,342 - 47,694,061
singlet/doubletsinglet
Overlap genenone
Upstream geneTicam2, Eif1a, LOC100042226, Cdo1, Atg12, Ap3s1, LOC100042950, 4833403I15Rik, LOC666798, Gm949, LOC100042241, Commd10, EG628438, LOC667120, Sema6a, LOC628477, 9130209A04Rik
Downstream geneA730092B10, LOC383325, LOC100042982, LOC100042284, LOC100042301, EG433182, LOC383326, LOC100042323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108B20.bB6Ng01-108B20.g
ACCDH915384DH915385
length1,211720
definitionDH915384|Mus musculus domesticus DNA, BAC clone: B6Ng01-108B20, 5' end.DH915385|Mus musculus domesticus DNA, BAC clone: B6Ng01-108B20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaacttttcagctggggaacgaggtaagtctgatcttgaactt
tctaaggaaattcaagacagtctatcagaagtaaagtggaaaatggcttt
acaagttatgtttggccttaaattttttctagtgttagaagcccttctgt
tccttttcacatgttatcaagtgattaagatagggctgaaaattctagag
gaaattcagggcagtctatcagaagtaaagcggggagagagagtaggagc
aaggagaaacggtaagtatacaggcctttccaagggtcttgaacccgagg
aaaagtttaggtcaggtaagaatacctggagagagattagaagaaaaaga
ggaaaaagggagaagaaaaaagatcgattagcggaggtctctaggagaag
gagcctgtgctctgaagaaacagactgggaggaagaagcagcccattacc
agccagctaattggtcaagaaaaaagccaaaagcggctggcgaaggccag
tttgctaattggcctcagggcaatcggctaccaggtgcactcccgcccta
tgcggagtccccgccctgcgtagtgcgtcagcccgtagtgcgtcagcaat
gcgcagaggggcagtgcgcagagaggcagtgcgcagactcattcattccc
cgagaggaacaaaggaaaatacagcaggcatttccagtctttgaaggagc
cgagggtgggcgtgtccacgctccggtagaatacgtacagattaaggaaa
ttgccgagtcggttcgtaaatacggaaccaatgctaatttcaccttggtg
cagttagacaggctcgctggtatggcactaacgcctgccgactggcaaat
gattgcaaaagtcgctctccctagtatggccaaatatgtggaatggcgag
ctctgtggcaggaggcggcacagcgcagcccgagcaaacgctgctgcttt
actccagagcagagagattggacttttgacttgtaacgggtcagagagct
tattctgctgaacctgataagaggtatcatggagatcttaccacagggaa
tgtccatagtcctacatgtgccagctttatatacaaaaagcttctttgcc
atgaaggacattccctctttaatttgctcttacatgatgacttcctcgtg
tgcctaagaccttaccatgctagagcaatcgtgctcactaaactttagat
cgagtgggggt
gaattccaggcatgagactgaatggagcaaagggctttgtgggaaaatgt
gccgagaggagagggagaaggtttctggggtcgaggagctgcacaaggag
gggctggaggccagagatgatgatagagtgagattgggcagcgcaagtta
tcaatcaacacacagccaagtctccttgccaagaacacacacttgctcct
acactgccaaaaagacccgatggaggagtagctatcagaactccgagcaa
tgctcgcccaggcagctagttagagcaattaaaaacaatgtgcaggttat
agtagaggataatgtatcacacggtccaaaagcctttcaaagaccaatga
ttgatgatgtattagttcatttgtgcaatatgaggaatggttttccagtt
ctccaacacgcagggccccctcctccatcttatccccagagttatcccaa
taaagaaatatctctgtgcctccttatgtcatcttgacacctgaaatgaa
ttgacaaggctgcacacaatccatctcttccctaatccttggttgcaact
ttccaggggatttcattgtgcagctgtgtctgcgaatggtgtgcggtgat
ctaggtttattgtgatatgaaatccaggtgtgtgactctggttttacatg
tcttggattttattttattatttttttcttttttctcttctcttctcttc
tcttctcttctcttcacttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_47693342_47694061
seq2: B6Ng01-108B20.g_65_784

seq1  GAATTCCAGGCATGAGACTGAATGGAGCAAAGGGCTTTGTGGGAAAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCATGAGACTGAATGGAGCAAAGGGCTTTGTGGGAAAATGT  50

seq1  GCCGAGAGGAGAGGGAGAAGGTTTCTGGGGTCGAGGAGCTGCACAAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGAGGAGAGGGAGAAGGTTTCTGGGGTCGAGGAGCTGCACAAGGAG  100

seq1  GGGCTGGAGGCCAGAGATGATGATAGAGTGAGATTGGGCAGCGCAAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGAGGCCAGAGATGATGATAGAGTGAGATTGGGCAGCGCAAGTTA  150

seq1  TCAATCAACACACAGCCAAGTCTCCTTGCCAAGAACACACACTTGCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAACACACAGCCAAGTCTCCTTGCCAAGAACACACACTTGCTCCT  200

seq1  ACACTGCCAAAAAGACCCGATGGAGGAGTAGCTATCAGAACTCCGAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCCAAAAAGACCCGATGGAGGAGTAGCTATCAGAACTCCGAGCAA  250

seq1  TGCTCGCCCAGGCAGCTAGTTAGAGCAATTAAAAACAATGTGCAGGTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCGCCCAGGCAGCTAGTTAGAGCAATTAAAAACAATGTGCAGGTTAT  300

seq1  AGTAGAGGATAATGTATCACACGGTCCAAAAGCCTTTCAAAGACCAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGGATAATGTATCACACGGTCCAAAAGCCTTTCAAAGACCAATGA  350

seq1  TTGATGATGTATTAGTTCATTTGTGCAATATGAGGAATGGTTTTCCAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGATGTATTAGTTCATTTGTGCAATATGAGGAATGGTTTTCCAGTT  400

seq1  CTCCAACACGCAGGGCCCCCTCCTCCATCTTATCCCCAGAGTTATCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACACGCAGGGCCCCCTCCTCCATCTTATCCCCAGAGTTATCCCAA  450

seq1  TAAAGAAATATCTCTGTGCCTCCTTATGTCATCTTGACACCTGAAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAATATCTCTGTGCCTCCTTATGTCATCTTGACACCTGAAATGAA  500

seq1  TTGACAAGGCTGCACACAATCCATCTCTTCCCTAATCCTTGGTTGCAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAGGCTGCACACAATCCATCTCTTCCCTAATCCTTGGTTGCAACT  550

seq1  TTCCAGGGGATTTCATTGTGCAGCTGTGTCTGCGAATGGTGTGCGGTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGGGATTTCATTGTGCAGCTGTGTCTGCGAATGGTGTGCGGTGAT  600

seq1  CTAGGTTTATTGTGATATGAAATCCAGGTGTGTGACTCTGGTTTTACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTTATTGTGATATGAAATCCAGGTGTGTGACTCTGGTTTTACATG  650

seq1  TCTTGGATTTTATTTTATTATTTTTTTCTTTTTTCTCTTCTCTTCTCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGATTTTATTTTATTATTTTTTTCTTTTTTCTCTTCTCTTCTCTTC  700

seq1  TCTTCTCTTCTCTTCTCTTC  720
      ||||||||||||||| ||||
seq2  TCTTCTCTTCTCTTCACTTC  720