MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-112H06
Chromosome	18 (Build37)
Map Location	5,255,865 - 5,256,289
singlet/doublet	singlet
Overlap gene	Zfp438
Upstream gene	LOC664909, Map3k8, Papd1, EG664931, LOC100039354, LOC433157, 9430020K01Rik, LOC268988, Svil
Downstream gene	LOC100039442, Zeb1, EG664925, Arhgap12, Kif5b, LOC100039469
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC664909 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Map3k8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26410 MGI:1346878
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Papd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67440 MGI:1914690
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664931 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664931 MGI:3644066
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins pseudo : _no_value

name	LOC100039354 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039354
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein pseudo : _no_value

name	LOC433157 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433157
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	9430020K01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240185 MGI:2685174
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC268988 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:268988
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 452 ESTs, 11 Proteins pseudo : _no_value

name	Svil (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225115 MGI:2147319
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Zfp438 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240186 MGI:2444919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039442 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039442
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Zeb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21417 MGI:1344313
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664925 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664925 MGI:3647250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Arhgap12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75415 MGI:1922665
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Kif5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16573 MGI:1098268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039469 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039469
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs

name	Map3k8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131172 GeneID:26410 MGI:1346878
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase kinase kinase 8 transcript_id : NM_007746.2

name	Papd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117676375 GeneID:67440 MGI:1914690
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PAP associated domain containing 1 transcript_id : NM_026157.2

name	9430020K01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126506315 GeneID:240185 MGI:2685174
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9430020K01 gene transcript_id : NM_001081963.1

name	Svil (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801952 GeneID:225115 MGI:2147319
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : supervillin transcript_id : NM_178046.3

name	Svil (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23346600 GeneID:225115 MGI:2147319
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : supervillin transcript_id : NM_153153.1

name	Zfp438 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802290 GeneID:240186 MGI:2444919
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 438 transcript_id : NM_178722.4

name	LOC100039442 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269608 GeneID:100039442
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100039442 transcript_id : XM_001472928.1

name	Zeb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130126 GeneID:21417 MGI:1344313
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger E-box binding homeobox 1 transcript_id : NM_011546.2

name	EG664925 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94404241 GeneID:664925 MGI:3647250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG664925 transcript_id : XM_974871.1

name	Arhgap12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89242138 GeneID:75415 MGI:1922665
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 12 transcript_id : NM_029277.2

name	Arhgap12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89242142 GeneID:75415 MGI:1922665
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 12 transcript_id : NM_001039692.1

name	Kif5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61657920 GeneID:16573 MGI:1098268
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 5B transcript_id : NM_008448.2

name	LOC100039469 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269610 GeneID:100039469
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs product : hypothetical protein LOC100039469 transcript_id : XM_001472943.1

name	Map3k8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678798 CCDS:CCDS29036.1 GeneID:26410 MGI:1346878
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 note : cancer Osaka thyroid, oncogene; tumor progression locus 2 product : mitogen activated protein kinase kinase kinase 8 protein_id : NP_031772.1

name	Papd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312970 GeneID:67440 MGI:1914690
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : PAP associated domain containing 1 protein_id : NP_080433.1

name	9430020K01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126506316 GeneID:240185 MGI:2685174
definition	codon_start : 1 product : hypothetical protein LOC240185 protein_id : NP_001075432.1

name	Svil (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346601 GeneID:225115 MGI:2147319
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0051016 - barbed-end actin filament capping [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; archvillin product : supervillin isoform 1 protein_id : NP_694793.1

name	Svil (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017331 CCDS:CCDS29038.1 GeneID:225115 MGI:2147319
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0051016 - barbed-end actin filament capping [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; archvillin product : supervillin isoform 2 protein_id : NP_835147.1

name	Zfp438 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982325 GeneID:240186 MGI:2444919
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : zinc finger protein 438 protein_id : NP_848837.2

name	LOC100039442 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269609 GeneID:100039442
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472978.1

name	Zeb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756073 CCDS:CCDS29039.1 GeneID:21417 MGI:1344313
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007417 - central nervous system development [Evidence IGI]; GO:0048598 - embryonic morphogenesis [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : transcription factor 8 product : zinc finger homeobox 1a protein_id : NP_035676.1

name	EG664925 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94404242 GeneID:664925 MGI:3647250
definition	codon_start : 1 product : similar to pORF1 protein_id : XP_979965.1

name	Arhgap12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89242139 GeneID:75415 MGI:1922665
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : Rho GTPase activating protein 12 isoform 2 protein_id : NP_083553.2

name	Arhgap12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89242143 GeneID:75415 MGI:1922665
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : Rho GTPase activating protein 12 isoform 1 protein_id : NP_001034781.1

name	Kif5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61657921 GeneID:16573 MGI:1098268
definition	GO_component : GO:0035253 - ciliary rootlet [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005871 - kinesin complex [Evidence TAS]; GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence IEA]; GO:0043005 - neuron projection [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence TAS] [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007028 - cytoplasm organization and biogenesis [Evidence IMP]; GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0007017 - microtubule-based process [Evidence TAS]; GO:0006839 - mitochondrial transport [Evidence TAS] codon_start : 1 note : kinesin heavy chain member 5B, ubiquitous product : kinesin family member 5B protein_id : NP_032474.2

name	LOC100039469 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269611 GeneID:100039469
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472993.1

name	LOC664909 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664909
definition	number : 2 pseudo : _no_value

name	LOC664909 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664909
definition	number : 1 pseudo : _no_value

name	EG664931 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664931
definition	number : 1 pseudo : _no_value

name	EG664931 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664931
definition	number : 2 pseudo : _no_value

name	LOC100039354 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149269606 GeneID:100039354
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein product : similar to gag protein pseudo : _no_value transcript_id : XR_030866.1

name	LOC433157 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149269605 GeneID:433157
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical gene supported by AK043736 transcript_id : XR_035194.1

name	LOC268988 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149269607 GeneID:268988
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 452 ESTs, 11 Proteins product : similar to ribosomal protein L7a pseudo : _no_value transcript_id : XR_030883.1

clone name	MSMg01-115I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304L04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-051M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526P13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-095C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512F23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-312C13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-486E16
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-249I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218L01
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-112H06.b	B6Ng01-112H06.g
ACC	DH918514	DH918515
length	1,225	419
definition	DH918514\|Mus musculus domesticus DNA, BAC clone: B6Ng01-112H06, 5' end.	DH918515\|Mus musculus domesticus DNA, BAC clone: B6Ng01-112H06, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctatcagacctttaaagaagacctagttctaatattcctcaaact gtttcataaatataaacaaaagcttctctacacaattactctgatacgta aaccacacaaagtccctacagagaccaatttcccttatgcatatcgacat aaaaatactcaataaaattctcgcaaactgattccaagaatacatcaaaa acgatcatccagcatgatcaagtaggcttcatgtcagggatgtaaggatg gttaaatatatggaaatctatcaacctaatccactatataaacaaactca tagacaaaaatcccatgaccatatcattagatgctgagaaagcatttgac aaaatccaatacccattcatgataaaagtcttggaaagatcaggaatgca aggcccatatctaaatataataaaagcagtatacagcaaaccagtagcca acatcaaactaaatggagagaaacttgaagcaatcccactaaaatcaggg actagacaaggctgcccaacctctccctacctattcaatatagtacttga aatcctaggcagatcaattagacagcaaagggagatcaaagggatacaaa ttcgaaaggaagaagtcaaaataccactacttgcagatgatatgatagta tatatatgagaccccaaaaattccaccagagaattcctaaacctgatgaa caacttcagtgaaatacctggatagaacatcaactcaaacaaatcaatgg cctttctctacacaaaggataaacaggctgagaaagaaattagggaaaca acacccttcacaatagtcatgaataatataaaataccttggtgtgaatct aaggaagtaaaagatctgtatgttaagaacttcaagtctctgagaaagaa atcaaagaggatcttcaaaggatggaaaggtccctgtcttagttagggtt tactgctgtgacagacacatgacagcagtcttataaaaacacatgggctg ctacagtttcagagttcagtcatatcatcacatggagcatgcagcatcag gcagctagcgcagcgagctgaaagtcacatctcatcagctgctctgagac tgacttcaggcactagttgagatcttgccaaccccagtacacatcacagg tcacttatccaaagccacttatggcaatcggtcaggatcacatcatctag atcctgtccctgacctaatcgcgca	tccagtactgaaattgtgtagatagccagaccacaatgggcttataaatg cacaaggacagagattagagctaaggccagagaaagatgactctgatggg cagtaaaggaaaattaggcaagtaagcttaccaacctcttgctacaacaa ttagagcaggagctgtccctaaagctgttgtcagtctgtggaatcaaggc tgcctagtttggcctcagtgggagaggatacatctaacactgtagaaact tgatgcgccaggttgggggagattcccagagaccactccagattattctg tgaggctcagtatcactttaacaagaaaactaaacaaatactgctgtgga tataaatgcaaaagtattcaacaaagtattagtatattaaatgaagtatg gggagggtatgggggattt
quality values	Open. Hide. 61 47 31 39 61 55 61 49 61 38 38 55 61 61 61 61 61 61 61 61 61 61 61 61 61 24 12 20 15 11 13 30 30 28 28 26 26 36 55 61 61 61 59 55 59 61 61 61 59 61 61 61 61 61 59 59 61 61 61 55 59 61 61 61 61 61 61 61 61 59 52 44 59 50 50 49 49 49 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 59 61 61 61 59 55 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 43 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 57 57 53 57 53 53 57 53 53 57 57 53 57 57 57 53 47 47 53 50 57 53 53 47 57 53 52 53 46 52 53 53 53 57 57 43 53 57 53 53 57 45 57 52 57 57 45 53 53 45 47 57 53 53 50 41 52 34 57 57 53 52 57 53 57 50 50 50 57 39 52 43 31 53 52 57 52 35 53 52 43 57 52 57 52 52 53 52 38 41 53 50 53 23 46 47 46 30 57 57 57 50 47 52 42 41 30 46 50 33 38 57 35 52 50 24 53 39 53 37 35 34 47 35 53 50 53 40 29 42 44 50 37 30 40 41 52 53 48 36 52 40 48 37 41 53 41 36 33 53 40 57 33 31 28 40 37 36 34 32 36 42 37 35 46 38 38 37 32 37 32 40 18 57 36 40 35 24 33 36 44 46 24 57 37 57 48 40 40 48 39 29 37 27 48 36 53 45 15 32 25 20 34 51 51 34 26 30 46 21 44 35 48 25 48 51 43 23 32 46 29 21 48 36 8 46 29 29 51 48 29 23 34 44 28 37 51 48 29 18 30 20 29 22 31 28 36 28 32 33 29 29 30 34 33 31 38 29 29 29 29 33 51 51 30 28 29 29 41 20 20 40 41 24 43 23 35 27 29 26 32 35 29 8 12 20 29 31 25 20 33 46 41 26 10 28 17 27 31 34 22 31 34 41 24 31 27 30 18 27 29 29 38 24 27 20 26 28 31 29 29 28 29 23 36 12 28 51 25 25 27 51 28 27 27 20 41 23 14 30 5 6 23 10 9 6 17 20 5 10 30 6 6 21 20 22 24 16 51 27 17 29 12 38 38 27 12 29 17 27 19 34 30 17 29 25 12 15 51 20 17 51 31 25 28 23 35 19 31 30 22 17 51 11 11 15 15 11 10 39 13 27 33 18 16 8 5 7 35 13 19 19 9 24 19 26 27 39 39 44 9 8 33 17 11 28 28 44 35 17 17 39 14 34 11 12 6 17 18 34 19 9 5 8 20 23 7 17 24 26 22 11 31 16 33 5 5 13 15 29 13 19 14 18 11 30 23 5 3 7 13 8 29 7 13 13 16 7 15 25 15 15 15 24 10 27 9 3 3 5 7 11 11 10 18 4 2 6 4 19 24 19 14 11 16 4 3 3 3 5 4 20 11 24 7 6 24 17 9 7 5 19 24 7 10 6 9 16 12 6 20 13 5 7 15 10 10 8 18 7 18 11 4 12 5 8 4 21 4 9 13 18 7 9 7 3 7 5 4 6 3 4 6 17 20 12 2 2 3 1 2 5 3 4 3 13 9 10 7 3 14 9 7 3 2 3 14 5 4 18 16 3 3 5 7 9 3 10 10 7 3 1 2 1 3 3 4 1 3 4 18 3 11 4 4 17 4 7 4 6 7 16 9 6 7 18 20 7 8 6 4 9 4 4 13 13 4 6 3 4 20 13 8 3 17 8 7 9 3 4 18 19 5 3 4 3 11	Open. Hide. 49 59 59 12 12 16 12 10 13 28 30 36 49 52 59 59 59 61 61 59 52 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 43 33 43 27 26 26 41 44 37 31 59 59 59 59 61 59 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 61 61 59 55 59 59 59 59 59 61 61 61 61 59 59 61 61 59 59 61 61 61 61 59 55 59 61 59 61 61 61 61 59 61 61 61 59 59 59 59 59 61 61 59 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 59 55 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 55 55 55 55 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 55 55 55 47 37 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr18_5255865_5256289
seq2: B6Ng01-112H06.g_69_493

seq1  GAATTCTCCAGTACTGAAATTGTGTAGATAGCCAGACCACAATGGGCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGTACTGAAATTGTGTAGATAGCCAGACCACAATGGGCTTA  50

seq1  TAAATGCACAAGGACAGAGATTAGAGCTAAGGCCAGAGAAAGATGACTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCACAAGGACAGAGATTAGAGCTAAGGCCAGAGAAAGATGACTCT  100

seq1  GATGGGCAGTAAAGGAAAATTAGGCAAGTAAGCTTACCAACCTCTTGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGCAGTAAAGGAAAATTAGGCAAGTAAGCTTACCAACCTCTTGCTA  150

seq1  CAACAATTAGAGCAGGAGCTGTCCCTAAAGCTGTTGTCAGTCTGTGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATTAGAGCAGGAGCTGTCCCTAAAGCTGTTGTCAGTCTGTGGAAT  200

seq1  CAAGGCTGCCTAGTTTGGCCTCAGTGGGAGAGGATACATCTAACACTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTGCCTAGTTTGGCCTCAGTGGGAGAGGATACATCTAACACTGTA  250

seq1  GAAACTTGATGCGCCAGGTTGGGGGAGATTCCCAGAGACCACTCCAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTGATGCGCCAGGTTGGGGGAGATTCCCAGAGACCACTCCAGATT  300

seq1  ATTCTGTGAGGCTCAGTATCACTTTAACAAGAAAACTAAACAAATACTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGAGGCTCAGTATCACTTTAACAAGAAAACTAAACAAATACTGC  350

seq1  TGTGGATATAAATGCAAAAGTATTCAACAAAGTATTAGTATATTAAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATATAAATGCAAAAGTATTCAACAAAGTATTAGTATATTAAATGA  400

seq1  AGTATGGGGAGGGTATGGGGGATTT  425
      |||||||||||||||||||||||||
seq2  AGTATGGGGAGGGTATGGGGGATTT  425

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information