BAC Information

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BAC

Clone NameB6Ng01-112J10
Chromosome18 (Build37)
Map Location 49,503,717 - 49,638,752
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042323, LOC545470
Downstream geneDtwd2, Dmxl1, Tnfaip8, Hsd17b4, LOC626721, LOC667233, Gm93
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112J10.bB6Ng01-112J10.g
ACCDH918614DH918615
length921175
definitionDH918614|Mus musculus domesticus DNA, BAC clone: B6Ng01-112J10, 5' end.DH918615|Mus musculus domesticus DNA, BAC clone: B6Ng01-112J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,503,717 - 49,504,635)(49,638,578 - 49,638,752)
sequence
gaattcatggtgttcttagtctacattaataataataataaaaattgaag
aatgaactaaaaaaatccagaggacaattttattagagtttaaagaaaaa
atacctcagagcaggcaagctataaatctcagcgactaaagaggaaaagg
aaaaagtagccatactgtttaagccaacacacagatcagccacatggaag
ggatggagaaagagggggaaggaggaaggcaggaaaaagctatttttctt
ttattttagtttttcaaggcataatctctctctgtaggcttggttgttca
aaaactcactctgtagatcaggctggcctcgaagtcacaaagatccatct
tactggcaagcatggagaaagagactttaaataaagaataaggatcccca
aggtatcagaaaaagtactctttggttcaagccagaatcgtaaagaaagg
tagaccaagagaaaactgagatatgcctcagaaaggtggaagaccaaaag
accccccatggcagcttggaaggactgcaatagcaagcagaaattctgag
aaggaaaagtatacttgacctggaccagaaagtcattcctcagtgacagg
gtcctgagagaaaggaccaggagatcaacagataaacagaatagaggata
gaaaagattttttttaaaaatgtctggaactgtatttctttggcaaatct
tcgcctaaactttgctttttgtcagggcactttatcccagcaatgataaa
gtcattaagactaggctttgacttcaataatggacattagcaagcacagg
tgacctaatcacaccaacaaacctcctacccaatgccctccaagattttt
ccactagctcaccccgcatggctttcaactgttctcctgtttgtggctgt
gaagttggacttcatcctttc
tggctttagtccttgtcaattacaaaccaggtcatatttgtgattactct
aagaggaatgttgaggctgatatagaaaggaataatcaaggttatatcaa
tgccaaagtaagagggagggggagggcgaaagggtggtcgagtggatggg
gttaaggagaaaagggaagaagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_49503717_49504635
seq2: B6Ng01-112J10.b_48_968

seq1  GAATTCATGGTGTTCTTAGTCTACATTAATAATAATAATAAAAATTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGTGTTCTTAGTCTACATTAATAATAATAATAAAAATTGAAG  50

seq1  AATGAACTAAAAAAATCCAGAGGACAATTTTATTAGAGTTTAAAGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACTAAAAAAATCCAGAGGACAATTTTATTAGAGTTTAAAGAAAAA  100

seq1  ATACCTCAGAGCAGGCAAGCTATAAATCTCAGCGACTAAAGAGGAAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTCAGAGCAGGCAAGCTATAAATCTCAGCGACTAAAGAGGAAAAGG  150

seq1  AAAAAGTAGCCATACTGTTTAAGCCAACACACAGATCAGCCACATGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTAGCCATACTGTTTAAGCCAACACACAGATCAGCCACATGGAAG  200

seq1  GGATGGAGAAAGAGGGGGAAGGAGGAAGGCAGGAAAAAGCTATTTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGAAAGAGGGGGAAGGAGGAAGGCAGGAAAAAGCTATTTTTCTT  250

seq1  TTATTTTAGTTTTTCAAGGCATAATCTCTCTCTGTAGGCTTGGTTGTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAGTTTTTCAAGGCATAATCTCTCTCTGTAGGCTTGGTTGTTCA  300

seq1  AAAACTCACTCTGTAGATCAGGCTGGCCTCGAAGTCACAAAGATCCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCACTCTGTAGATCAGGCTGGCCTCGAAGTCACAAAGATCCATCT  350

seq1  TACTGGCAAGCATGGAGAAAGAGACTTTAAATAAAGAATAAGGATCCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGCAAGCATGGAGAAAGAGACTTTAAATAAAGAATAAGGATCCCCA  400

seq1  AGGTATCAGAAAAAGTACTCTTTGGTTCAAGCCAGAATCGTAAAGAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATCAGAAAAAGTACTCTTTGGTTCAAGCCAGAATCGTAAAGAAAGG  450

seq1  TAGACCAAGAGAAAACTGAGATATGCCTCAGAAAGGTGGAAGACCAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCAAGAGAAAACTGAGATATGCCTCAGAAAGGTGGAAGACCAAAAG  500

seq1  ACCCCCCATGGCAGCTTGGAAGGACTGCAATAGCAAGCAGAAATTCTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCCATGGCAGCTTGGAAGGACTGCAATAGCAAGCAGAAATTCTGAG  550

seq1  AAGGAAAAGTATACTTGACCTGGACCAGAAAGTCATTCCTCAGTGACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAGTATACTTGACCTGGACCAGAAAGTCATTCCTCAGTGACAGG  600

seq1  GTCCTGAGAGAAAGGACCAGGAGATCAACAGATAAACAGAATAGAGGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGAGAGAAAGGACCAGGAGATCAACAGATAAACAGAATAGAGGATA  650

seq1  GAAAAGA-TTTTTTTAAAAATGTCTGGAACTGTATTTCTTTGGCAAATCT  699
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGATTTTTTTTAAAAATGTCTGGAACTGTATTTCTTTGGCAAATCT  700

seq1  TCGCCTAAAC-TTGC-TTTTGTCAGGGCACTTTATCCCAGCAATGATAAA  747
      |||||||||| |||| ||||||||||||||||||||||||||||||||||
seq2  TCGCCTAAACTTTGCTTTTTGTCAGGGCACTTTATCCCAGCAATGATAAA  750

seq1  GTCATTAAGACTAGGC-TTGACTTCAATAATGGACAATTAGCAAGCACAG  796
      |||||||||||||||| |||||||||||||||||| ||||||||||||||
seq2  GTCATTAAGACTAGGCTTTGACTTCAATAATGGAC-ATTAGCAAGCACAG  799

seq1  GTGACCTAATCACACCAACAAACCTCCTACCCAATGCCCTCCAAGATTTT  846
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTGACCTAATCACACCAACAAACCTCCTACCCAATGCCCTCCAAGA-TTT  848

seq1  TTCCACTAGCTCACCCCGCATGGCTTTCAACTGTTCTCCTGTTTGTGGCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTAGCTCACCCCGCATGGCTTTCAACTGTTCTCCTGTTTGTGGCT  898

seq1  GTGAAGTTGGACTTCATCCTTTC  919
      |||||||||||||||||||||||
seq2  GTGAAGTTGGACTTCATCCTTTC  921

seq1: chr18_49638578_49638752
seq2: B6Ng01-112J10.g_71_245 (reverse)

seq1  CCCCTTCTTCCCTTTTCTCCTTAACCCCATCCACTCGACCACCCTTTCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCTTCCCTTTTCTCCTTAACCCCATCCACTCGACCACCCTTTCGC  50

seq1  CCTCCCCCTCCCTCTTACTTTGGCATTGATATAACCTTGATTATTCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCTCCCTCTTACTTTGGCATTGATATAACCTTGATTATTCCTTT  100

seq1  CTATATCAGCCTCAACATTCCTCTTAGAGTAATCACAAATATGACCTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCAGCCTCAACATTCCTCTTAGAGTAATCACAAATATGACCTGGT  150

seq1  TTGTAATTGACAAGGACTAAAGCCA  175
      |||||||||||||||||||||||||
seq2  TTGTAATTGACAAGGACTAAAGCCA  175