BAC Information

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BAC

Clone NameB6Ng01-112P03
Chromosome18 (Build37)
Map Location 67,770,828 - 67,907,119
singlet/doubletdoublet
Overlap geneCep76, Tnfsf5ip1, Ptpn2
Upstream geneMc4r, Gnal, Chmp1b, Mppe1, Impa2, B430212C06Rik, Cidea, Tubb6, Afg3l2, Slmo1, Spire1
Downstream geneSeh1l, LOC667939, D18Ertd653e, 4933403F05Rik, Rnmt, Mc5r, Mc2r
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112P03.bB6Ng01-112P03.g
ACCDH918870DH918871
length1,0951,074
definitionDH918870|Mus musculus domesticus DNA, BAC clone: B6Ng01-112P03, 5' end.DH918871|Mus musculus domesticus DNA, BAC clone: B6Ng01-112P03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,770,828 - 67,771,926)(67,906,026 - 67,907,119)
sequence
gaattcaatctggggcgatttactaaaaagaaacggtcatctgaatcgcc
ctcgtcactggctgcctagcgcttccagctttggcctgcgagcgcaggtc
cctctgagcccttcgaggctcatctcgggttctcctgaccactcaacaca
tactatctatccctgcacatctgccaaattaatttttttagatatgtttt
tctattcatttattttgggtaacccaagctggccttgaactcgctaccac
cattttcggctgcttcttaagtgttgcttgagtgttggcactctctctac
tcagacattcagtgaggacagtggtcttgaacctgccttgcctagaccag
ggcctgaggtgtggtgcacaatcggggcctttcagattcagcctccccgg
aggtaatcaccgataaccacactcatcctagcctagttaacccagtctgc
cattcgagaaggaattggtgtcaaagacaaaggacaattatctgtagtac
agaacaactctgggggcctccctgaacccattcaagtgtgcaataaagct
gataatttttaaaatgtccatccaatcatagatggttttaatcggtaaca
tcccaccaggctagtcttcgaaagactaagagttgaggcatcaaccaagt
aagaaagtcatagtaggtaccattccgtgtaggatgtgggaaactgcaca
ctacacttaattttatagtagaaagtcattaaggataaagaaataggcgg
ttgatggggaaagctccgcggactccttttgttttcaatacaagagctat
aaaacaagctcttcaagtaaaattacttaattatgggttcataatctcag
atgtgaaaatgcagtatttagggccagtgagatggctctcagcaggtgaa
agggcttttctgccaagctgcagccgtagagttgaagtgggggagagcac
actccatgttggttggtctttgaacttcgtgtgtctgtgcacatacccga
taccacagaaatgttaaaagaaataaatgcagtgtttgtgttgcaagctc
gagcagagacttttctcagtccttggtgcggagacttatacatac
gaattcagagggggaaaaatatatatatatatattcccatgaaatgtatt
cctaggatagggagtgtgttttaagatggaaatagttaagagaaatacac
ttgatctctctctctctctctctttttttttttttttggttttttgagac
agggtttctctgtatagccctggctgtcctggaactcactctgtagacca
gactggcctcgaactcagaaatccgcctgcctctgcctcccgagtgctgg
gattaaaggcatgtaccaccatgcccggctttagaaacttctaacaagga
tgttcacattgcctggaaaatgggaggaagaatatcatgatactattggc
agtgctcacccaagggtgtaattctctcttcagtgagcacggttgggaga
gtgtcaccctctttcatcaatgccctttccttgatgggccatttatctct
acgtttaagttgtttgtttaagccatctcttaccacactgcacaagcaaa
gacctggacggtcaatataaagttatctggtacatgaaaagtgagaaaaa
tgtcccatactctttccgggctcatcttgcaaagtaataagccaaagcaa
gctgtgtctcctcaggcctgggtgatggtcaaagggctgtttacccatct
tgttaaccagtcaaagcaaattctcactaagtatatagaagaatgcatgc
ttaccatctcccctaggaagatacagagaagtggtaagtaactgtgccag
tgggtttgtaaactcaatacaaacctagacttaactgggaagaggcctcc
acttgtgacttgtaggcaagcctgtgggtattgttttttaaattgtgtgt
gagtggtgtgtgtgagtgtgtatgtatatccatgtatgtacaggtgccac
agaaggtgagaagaggtcttagatcccctgagtcagagtattggctgtgt
gagtgctaggaatgaatttgggtctctagaatgctctgctgagcatctct
cagcctcaaatacttgagtacagagagcaaatgatacaaacataacctgt
ggggtttttttgacctttttcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_67770828_67771926
seq2: B6Ng01-112P03.b_46_1140

seq1  GAATTCAATCTGGGGCGATTTACTAAAAAGAAACGGTCATCTGAATCGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTGGGGCGATTTACTAAAAAGAAACGGTCATCTGAATCGCC  50

seq1  CTCGTCACTGGCTGCCTAGCGCTTCCAGCTTTGGCCTGCGAGCGCAGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTCACTGGCTGCCTAGCGCTTCCAGCTTTGGCCTGCGAGCGCAGGTC  100

seq1  CCTCTGAGCCCTTCGAGGCTCATCTCGGGTTCTCCTGACCACTCAACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGCCCTTCGAGGCTCATCTCGGGTTCTCCTGACCACTCAACACA  150

seq1  TACTATCTATCCCTGCACATCTGCCAAATTAATTTTTTTAGATATGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCTATCCCTGCACATCTGCCAAATTAATTTTTTTAGATATGTTTT  200

seq1  TCTATTCATTTATTTTGGGTAACCCAAGCTGGCCTTGAACTCGCTACCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCATTTATTTTGGGTAACCCAAGCTGGCCTTGAACTCGCTACCAC  250

seq1  CATTTTCGGCTGCTTCTTAAGTGTTGCTTGAGTGTTGGCACTCTCTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCGGCTGCTTCTTAAGTGTTGCTTGAGTGTTGGCACTCTCTCTAC  300

seq1  TCAGACATTCAGTGAGGACAGTGGTCTTGAACCTGCCTTGCCTAGACCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACATTCAGTGAGGACAGTGGTCTTGAACCTGCCTTGCCTAGACCAG  350

seq1  GGCCTGAGGTGTGGTGCACAATCGGGGCCTTTCAGATTCAGCCTCCCCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGAGGTGTGGTGCACAATCGGGGCCTTTCAGATTCAGCCTCCCCGG  400

seq1  AGGTAATCACCGATAACCACACTCATCCTAGCCTAGTTAACCCAGTCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATCACCGATAACCACACTCATCCTAGCCTAGTTAACCCAGTCTGC  450

seq1  CATTCGAGAAGGAATTGGTGTCAAAGACAAAGGACAATTATCTGTAGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGAGAAGGAATTGGTGTCAAAGACAAAGGACAATTATCTGTAGTAC  500

seq1  AGAACAACTCTGGGGGCCTCCCTGAACCCATTCAAGTGTGCAATAAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAACTCTGGGGGCCTCCCTGAACCCATTCAAGTGTGCAATAAAGCT  550

seq1  GATAATTTTTAAAATGTCCATCCAATCATAGATGGTTTTAATCGGTAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTTTTAAAATGTCCATCCAATCATAGATGGTTTTAATCGGTAACA  600

seq1  TCCCACCAGGCTAGTCTTCGAAAGACTAAGAGTTGAGGCATCAACCAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCAGGCTAGTCTTCGAAAGACTAAGAGTTGAGGCATCAACCAAGT  650

seq1  AAGAAAGTCATAGTAGGTACCATTCCGTGTAGGATGTGGGAAACTGCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGTCATAGTAGGTACCATTCCGTGTAGGATGTGGGAAACTGCACA  700

seq1  CTACACTTAATTTTATAGTAGAAAGTCATTAAGGATAAAGAAATAGGCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTTAATTTTATAGTAGAAAGTCATTAAGGATAAAGAAATAGGCGG  750

seq1  TTGAT-GGGAAAGCTCCGCGGACTCCTTTTGTTTTCAATACAAGAGCTAT  799
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGGGAAAGCTCCGCGGACTCCTTTTGTTTTCAATACAAGAGCTAT  800

seq1  AAAACAAGCTCTTCAAGTAAAATTACTTAATTATGGGTTCATAATCTCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAGCTCTTCAAGTAAAATTACTTAATTATGGGTTCATAATCTCAG  850

seq1  ATGTGAAAATGCAGTATTTAGGGCCAGTGAGATGGCTCTCAGCAGGTGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAAATGCAGTATTTAGGGCCAGTGAGATGGCTCTCAGCAGGTGAA  900

seq1  AGGGCTTTCCTGCCAAGCTGCAGCCCGTAGAGTTGAAGTGGGGGAGAGCA  949
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  AGGGCTTTTCTGCCAAGCTGCAG-CCGTAGAGTTGAAGTGGGGGAGAGCA  949

seq1  CACTCCATG-TGGTTGGTCTTTGAACTCCGTGTGTCTGTGCACATACCCG  998
      ||||||||| ||||||||||||||||| ||||||||||||||||||||||
seq2  CACTCCATGTTGGTTGGTCTTTGAACTTCGTGTGTCTGTGCACATACCCG  999

seq1  ATACCCACAAGAAATGTAAAAGAAAATAAATGCAGTGTTTGTGTGCCAAA  1048
      ||| |||| |||||||| |||  |||||||||||||||||||||  | ||
seq2  ATA-CCAC-AGAAATGTTAAAAGAAATAAATGCAGTGTTTGTGTTGC-AA  1046

seq1  GCTCTGAGGCAGAGACTTTTCTCAGTCCTT-GTGCGGGAGACTAATACAT  1097
      |||| || |||||||||||||||||||||| |||| ||||||| ||||||
seq2  GCTC-GA-GCAGAGACTTTTCTCAGTCCTTGGTGC-GGAGACTTATACAT  1093

seq1  AC  1099
      ||
seq2  AC  1095

seq1: chr18_67906026_67907119
seq2: B6Ng01-112P03.g_67_1140 (reverse)

seq1  AATGAAAAAGTGTAAAAAAAAAACACCACAAGGTTATGTTTGTAATATTT  50
      | |||||||| ||   |||||||| |||| ||||||||||||||  ||||
seq2  AGTGAAAAAG-GT--CAAAAAAACCCCAC-AGGTTATGTTTGTATCATTT  46

seq1  GCTCTACTGTTACTTTAAAAGGTATTTGAGGGTTGGAGAGATGGCTCAGC  100
      ||||| ||| ||||     | |||||||||| |  ||||||| |||||||
seq2  GCTCT-CTG-TACT----CAAGTATTTGAGGCT--GAGAGAT-GCTCAGC  87

seq1  AGAGCATTTCTAGAGGACACAAATTCAATTCCTAGCACTCACAACAGCCA  150
      |||||| ||||||| ||| ||||||| ||||||||||||||| |||||||
seq2  AGAGCA-TTCTAGA-GACCCAAATTC-ATTCCTAGCACTCAC-ACAGCCA  133

seq1  ATAACTCTGGCTCCAGGGGATCTGAGACCCTCTTCTCACC-TCTGTGGGC  199
      || |||||| || |||||||||| ||| |||||||||||| ||||| |||
seq2  AT-ACTCTGACT-CAGGGGATCTAAGA-CCTCTTCTCACCTTCTGT-GGC  179

seq1  ACCTGTACATACATGGATATACATACACACTCACACACACCACTCACACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTACATACATGGATATACATACACACTCACACACACCACTCACACA  229

seq1  CAATTTAAAAAACAATACCCACAGGCTTGCCTACAAGTCACAAGTGGAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAAAAAACAATACCCACAGGCTTGCCTACAAGTCACAAGTGGAGG  279

seq1  CCTCTTCCCAGTTAAGTCTAGGTTTGTATTGAGTTTACAAACCCACTGGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCCCAGTTAAGTCTAGGTTTGTATTGAGTTTACAAACCCACTGGC  329

seq1  ACAGTTACTTACCACTTCTCTGTATCTTCCTAGGGGAGATGGTAAGCATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTACTTACCACTTCTCTGTATCTTCCTAGGGGAGATGGTAAGCATG  379

seq1  CATTCTTCTATATACTTAGTGAGAATTTGCTTTGACTGGTTAACAAGATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCTATATACTTAGTGAGAATTTGCTTTGACTGGTTAACAAGATG  429

seq1  GGTAAACAGCCCTTTGACCATCACCCAGGCCTGAGGAGACACAGCTTGCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAACAGCCCTTTGACCATCACCCAGGCCTGAGGAGACACAGCTTGCT  479

seq1  TTGGCTTATTACTTTGCAAGATGAGCCCGGAAAGAGTATGGGACATTTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTATTACTTTGCAAGATGAGCCCGGAAAGAGTATGGGACATTTTT  529

seq1  CTCACTTTTCATGTACCAGATAACTTTATATTGACCGTCCAGGTCTTTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTTTCATGTACCAGATAACTTTATATTGACCGTCCAGGTCTTTGC  579

seq1  TTGTGCAGTGTGGTAAGAGATGGCTTAAACAAACAACTTAAACGTAGAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCAGTGTGGTAAGAGATGGCTTAAACAAACAACTTAAACGTAGAGA  629

seq1  TAAATGGCCCATCAAGGAAAGGGCATTGATGAAAGAGGGTGACACTCTCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGCCCATCAAGGAAAGGGCATTGATGAAAGAGGGTGACACTCTCC  679

seq1  CAACCGTGCTCACTGAAGAGAGAATTACACCCTTGGGTGAGCACTGCCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCGTGCTCACTGAAGAGAGAATTACACCCTTGGGTGAGCACTGCCAA  729

seq1  TAGTATCATGATATTCTTCCTCCCATTTTCCAGGCAATGTGAACATCCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATCATGATATTCTTCCTCCCATTTTCCAGGCAATGTGAACATCCTT  779

seq1  GTTAGAAGTTTCTAAAGCCGGGCATGGTGGTACATGCCTTTAATCCCAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAAGTTTCTAAAGCCGGGCATGGTGGTACATGCCTTTAATCCCAGC  829

seq1  ACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGTCTGGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGTCTGGTC  879

seq1  TACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTC  929

seq1  AAAAAACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGATCAAGTGTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGATCAAGTGTA  979

seq1  TTTCTCTTAACTATTTCCATCTTAAAACACACTCCCTATCCTAGGAATAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTAACTATTTCCATCTTAAAACACACTCCCTATCCTAGGAATAC  1029

seq1  ATTTCATGGGAATATATATATATATATTTTTCCCCCTCTGAATTC  1094
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGGGAATATATATATATATATTTTTCCCCCTCTGAATTC  1074