BAC Information

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BAC

Clone NameB6Ng01-113P16
Chromosome18 (Build37)
Map Location 22,592,620 - 22,782,858
singlet/doubletdoublet
Overlap geneAsxl3
Upstream geneLOC225264, Klhl14, 4921528I01Rik, LOC546708, LOC100040547
Downstream geneNol4, LOC100040579, LOC665797, Dtna
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113P16.bB6Ng01-113P16.g
ACCDH919622DH919623
length560815
definitionDH919622|Mus musculus domesticus DNA, BAC clone: B6Ng01-113P16, 5' end.DH919623|Mus musculus domesticus DNA, BAC clone: B6Ng01-113P16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,782,294 - 22,782,858)(22,592,620 - 22,593,429)
sequence
aattttctaccacacatttaatttatgaataacaaacactacaaattctg
aggcacatgactccagacccccagagctcctttgcttctcaagcaacaac
aactttagatactcttcctgggacatttactgctggaactcttcagctgc
ttttcttagagcattacttctttgtcacatttgttcacacttagcattct
gcctgaataacatagagatttcccaggattcagtcctcaaacttcaattc
cactcctcagttctttcattttatgcattgcccaggcacacactcatgaa
gcccaatgatggtctgagtcattgatacactgatcatattgcaatatcta
tcttcagctaatagattttcccaaagtttcagaataattcattcatgtat
tgcctataattccaattcagatctcccatggacataccaaactcaatgat
tcaaacagaataggtactagtgctattataagcacaccagtgaaaattca
gtttattatagaaacacacagacacacacatatagagaggggagggaaga
gggggaggaa
gaattctctagggaccagctgttgagtccaagagtcatttttagtctgtg
gaactgggtttgtttaagacaatgccattcactaagattgttccaattta
ggatctgcatatgcagatagacatagtgtttattgacccccgacttgtat
ggcacttacatagctgtttgtatgtggtccacttgccctagggcacagac
ccaattgtcagtgggaatggaagctggaatatatacagcagtcaagtgga
actgcggccacagttactaaatgatcccttctcttggaatccagatatgc
ttccgcacactgtgctattttgctgtattttaagtatccattttcaactg
gagaaaagctccaagtgagttaattacagtgggtgtaaaaaaaggaattc
aaattagtaatatcattatctctctctgcttctagtgtgtacgaagcagg
taacggatgaagtatcttccactcgagattgcagccttacgaacacggca
gtgcaaagcaagctggtatcttccttccagcagcacaccaaaaaggccct
gaagcaggtaagaggcctccttctgcacttaccctttcagttctgcctac
agaaggttaagggtttggtgggaaccaagtaaggtaactaggaacctaaa
ctcagaaaataacagaggtactgttttcttgtaatatttgatagaataat
ttttactatatattgaaattaggcaagaattaaaactgagaactctgtta
caaaacagaataagaaatgtgctttagactcatgcaagaacatgcatgtg
tgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22782294_22782858
seq2: B6Ng01-113P16.b_50_615 (reverse)

seq1  TTCCTCCCCCTCTTCCCTCCCCTCTCTATATGTGTGTGTCTGTGTGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCCCCTCTTCCCTCCCCTCTCTATATGTGTGTGTCTGTGTGTTTC  50

seq1  TATAAT-AACTGAATTTTCACTGGTGTGCTTATAATAGCACTAGTACCTA  99
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAAACTGAATTTTCACTGGTGTGCTTATAATAGCACTAGTACCTA  100

seq1  TTCTGTTTGAATCATTGAGTTTGGTATGTCCATGGGAGATCTGAATTGGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTGAATCATTGAGTTTGGTATGTCCATGGGAGATCTGAATTGGA  150

seq1  ATTATAGGCAATACATGAATGAATTATTCTGAAACTTTGGGAAAATCTAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGGCAATACATGAATGAATTATTCTGAAACTTTGGGAAAATCTAT  200

seq1  TAGCTGAAGATAGATATTGCAATATGATCAGTGTATCAATGACTCAGACC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAAGATAGATATTGCAATATGATCAGTGTATCAATGACTCAGACC  250

seq1  ATCATTGGGCTTCATGAGTGTGTGCCTGGGCAATGCATAAAATGAAAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGGGCTTCATGAGTGTGTGCCTGGGCAATGCATAAAATGAAAGAA  300

seq1  CTGAGGAGTGGAATTGAAGTTTGAGGACTGAATCCTGGGAAATCTCTATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAGTGGAATTGAAGTTTGAGGACTGAATCCTGGGAAATCTCTATG  350

seq1  TTATTCAGGCAGAATGCTAAGTGTGAACAAATGTGACAAAGAAGTAATGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAGGCAGAATGCTAAGTGTGAACAAATGTGACAAAGAAGTAATGC  400

seq1  TCTAAGAAAAGCAGCTGAAGAGTTCCAGCAGTAAATGTCCCAGGAAGAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAAAAGCAGCTGAAGAGTTCCAGCAGTAAATGTCCCAGGAAGAGT  450

seq1  ATCTAAAGTTGTTGTTGCTTGAGAAGCAAAGGAGCTCTGGGGGTCTGGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAGTTGTTGTTGCTTGAGAAGCAAAGGAGCTCTGGGGGTCTGGAG  500

seq1  TCATGTGCCTCAGAATTTGTAGTGTTTGTTATTCATAAATTAAATGTGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGCCTCAGAATTTGTAGTGTTTGTTATTCATAAATTAAATGTGTG  550

seq1  GTAGAAAATTGAATTC  565
      ||||||||||||||||
seq2  GTAGAAAATTGAATTC  566

seq1: chr18_22592620_22593429
seq2: B6Ng01-113P16.g_70_884

seq1  GAATTCTCTAGGGACCAGCTGTTGAGTCCAAGAGTCATTTTTAGTCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGGGACCAGCTGTTGAGTCCAAGAGTCATTTTTAGTCTGTG  50

seq1  GAACTGGGTTTGTTTAAGACAATGCCATTCACTAAGATTGTTCCAATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGGTTTGTTTAAGACAATGCCATTCACTAAGATTGTTCCAATTTA  100

seq1  GGATCTGCATATGCAGATAGACATAGTGTTTATTGACCCCCGACTTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGCATATGCAGATAGACATAGTGTTTATTGACCCCCGACTTGTAT  150

seq1  GGCACTTACATAGCTGTTTGTATGTGGTCCACTTGCCCTAGGGCACAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTACATAGCTGTTTGTATGTGGTCCACTTGCCCTAGGGCACAGAC  200

seq1  CCAATTGTCAGTGGGAATGGAAGCTGGAATATATACAGCAGTCAAGTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTGTCAGTGGGAATGGAAGCTGGAATATATACAGCAGTCAAGTGGA  250

seq1  ACTGCGGCCACAGTTACTAAATGATCCCTTCTCTTGGAATCCAGATATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCGGCCACAGTTACTAAATGATCCCTTCTCTTGGAATCCAGATATGC  300

seq1  TTCCGCACACTGTGCTATTTTGCTGTATTTTAAGTATCCATTTTCAACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGCACACTGTGCTATTTTGCTGTATTTTAAGTATCCATTTTCAACTG  350

seq1  GAGAAAAGCTCCAAGTGAGTTAATTACAGTGGGTGTAAAAAAAGGAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGCTCCAAGTGAGTTAATTACAGTGGGTGTAAAAAAAGGAATTC  400

seq1  AAATTAGTAATATCATTATCTCTCTCTGCTTCTAGTGTGTACGAAGCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTAATATCATTATCTCTCTCTGCTTCTAGTGTGTACGAAGCAGG  450

seq1  TAACGGATGAAGTATCTTCCACTCGAGATTGCAGCCTTACGAACACGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGGATGAAGTATCTTCCACTCGAGATTGCAGCCTTACGAACACGGCA  500

seq1  GTGCAAAGCAAGCTGGTATCTTCCTTCCAGCAGCACACCAAAAAGGCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAAGCAAGCTGGTATCTTCCTTCCAGCAGCACACCAAAAAGGCCCT  550

seq1  GAAGCAGGTAAGAGGCCTCCTTCTGCACTTACCCTTTCAGTTCTGCCTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGGTAAGAGGCCTCCTTCTGCACTTACCCTTTCAGTTCTGCCTAC  600

seq1  AGAAGGTTAAGGGTTTGGTGGGAACCAAGTAAGGTAACTAGGAACCTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTTAAGGGTTTGGTGGGAACCAAGTAAGGTAACTAGGAACCTAAA  650

seq1  CTCAGAAAATAACAGAGGTACTGTTT--CTGTAATATTTGATAGAATAA-  697
      ||||||||||||||||||||||||||   |||||||||||||||||||| 
seq2  CTCAGAAAATAACAGAGGTACTGTTTTCTTGTAATATTTGATAGAATAAT  700

seq1  TTTTACTATATATTGAAATTAGGCAAGAATT-AAACTGAGAACTCTGTTA  746
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTTACTATATATTGAAATTAGGCAAGAATTAAAACTGAGAACTCTGTTA  750

seq1  CAAAACAGAATAAGAAATGTGC-TTAGACTCATGCAAGAACATGCATGTG  795
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAAAACAGAATAAGAAATGTGCTTTAGACTCATGCAAGAACATGCATGTG  800

seq1  TGTGTGTGTGTGTGT  810
      |||||||||||||||
seq2  TGTGTGTGTGTGTGT  815