BAC Information

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BAC

Clone NameB6Ng01-115B14
Chromosome18 (Build37)
Map Location 15,187,167 - 15,317,333
singlet/doubletdoublet
Overlap geneKctd1
Upstream geneLOC100040094, LOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, EG622268
Downstream geneLOC100040151, Aqp4, LOC665473, Chst9, LOC670012, LOC100040551, EG225228, LOC100040202
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115B14.bB6Ng01-115B14.g
ACCDH920450DH920451
length1751,139
definitionDH920450|Mus musculus domesticus DNA, BAC clone: B6Ng01-115B14, 5' end.DH920451|Mus musculus domesticus DNA, BAC clone: B6Ng01-115B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,317,159 - 15,317,333)(15,187,167 - 15,188,316)
sequence
tagtcaagtcttgttctttactcaaacaattatacaaaatgcttaattaa
ttgttttatgtgcatgaggcagttttgtcagaattcactatgctcaaagg
aacagacaggaagtgtgtttgctaggaagcatcatcataaaagcaggagc
ctcccccctccccctctccctcccc
gaattctcacttgaatagaaatgactcagaaatacagaacataacttctt
ttcttgaaattagacacttgctatccagcccaggctagcctcaaactcac
aatcacctgcatccagctcccaccagctgggattattggtatgaagtcga
acaagtatcttctttctgtgcattaaatgcacacgtgtgcacagctaagg
ctccaggggtggtcaaacagtaactgcttgcttacagagcactcctttac
tgttatggaaaagagacaaatttttgagacaaatttttaaatattctcaa
tctttatatttgaaaatgtaatgaccctctaatgatcttaggctaaaagg
tagtagtataatcaagttaataataatggctgtaactttctggtctgctc
ttcaccatttagagaaaatggcccaaaatttaatattcactctaccgctt
atataaactaagactcatattccatcaccagaataattttataattttaa
taatatatttgtgatcctaatccatgtacttgatgtacatctattaaaat
gttaaagaaattaagcagtgacggctagatctctttgtgaagctatattc
aattgcttaatataatttagttggatgataataaagggagagataggagg
taagacattagcatactcaatatgtaaaagggggttgtggaaagggattg
tggtaaaagcctgtgcattcagagccaatcgctgccatttgttagtctta
atttaaaaatctgtaagaaagcatcaaaatcacttctgctcagctttaat
gagacagctcgagcaggaatctattcacttacctgctctaattagcatgc
gtatgtcctccacgtcaagtctgacaatacactcaactaaattaatgttc
atctcctaacagaaccacatttgagttagtagctctgacacagaatttgc
atattaacattttcataatgatagctagtgaggtgaggctgggaaagaga
tgtgcgagatctaaaaatgggaaggaaactgaggttcaaggaggtttggc
tggtgaagcacttgcagtgggtactggggttcaatggcatcaaaccccaa
ggtcttttcggctttgctcatggtacagagcatcctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_15317159_15317333
seq2: B6Ng01-115B14.b_50_224 (reverse)

seq1  GGGGAGGGAGAGGGGGAGGGGGGAGGCTCCTGCTTTTATGATGATGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGGAGAGGGGGAGGGGGGAGGCTCCTGCTTTTATGATGATGCTTC  50

seq1  CTAGCAAACACACTTCCTGTCTGTTCCTTTGAGCATAGTGAATTCTGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAACACACTTCCTGTCTGTTCCTTTGAGCATAGTGAATTCTGACA  100

seq1  AAACTGCCTCATGCACATAAAACAATTAATTAAGCATTTTGTATAATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCCTCATGCACATAAAACAATTAATTAAGCATTTTGTATAATTGT  150

seq1  TTGAGTAAAGAACAAGACTTGACTA  175
      |||||||||||||||||||||||||
seq2  TTGAGTAAAGAACAAGACTTGACTA  175

seq1: chr18_15187167_15188316
seq2: B6Ng01-115B14.g_68_1206

seq1  GAATTCTCACTTGAATAGAAATGACTCAGAAATACAGAACATAACTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTTGAATAGAAATGACTCAGAAATACAGAACATAACTTCTT  50

seq1  TTCTTGAAATTAGACACTTGCTATCCAGCCCAGGCTAGCCTCAAACTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAAATTAGACACTTGCTATCCAGCCCAGGCTAGCCTCAAACTCAC  100

seq1  AATCACCTGCATCCAGCTCCCACCAGCTGGGATTATTGGTATGAAGTCGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCTGCATCCAGCTCCCACCAGCTGGGATTATTGGTATGAAGTCGA  150

seq1  ACAAGTATCTTCTTTCTGTGCATTAAATGCACACGTGTGCACAGCTAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTATCTTCTTTCTGTGCATTAAATGCACACGTGTGCACAGCTAAGG  200

seq1  CTCCAGGGGTGGTCAAACAGTAACTGCTTGCTTACAGAGCACTCCTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGGGTGGTCAAACAGTAACTGCTTGCTTACAGAGCACTCCTTTAC  250

seq1  TGTTATGGAAAAGAGACAAATTTTTGAGACAAATTTTTAAATATTCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGGAAAAGAGACAAATTTTTGAGACAAATTTTTAAATATTCTCAA  300

seq1  TCTTTATATTTGAAAATGTAATGACCCTCTAATGATCTTAGGCTAAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATATTTGAAAATGTAATGACCCTCTAATGATCTTAGGCTAAAAGG  350

seq1  TAGTAGTATAATCAAGTTAATAATAATGGCTGTAACTTTCTGGTCTGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTATAATCAAGTTAATAATAATGGCTGTAACTTTCTGGTCTGCTC  400

seq1  TTCACCATTTAGAGAAAATGGCCCAAAATTTAATATTCACTCTACCGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCATTTAGAGAAAATGGCCCAAAATTTAATATTCACTCTACCGCTT  450

seq1  ATATAAACTAAGACTCATATTCCATCACCAGAATAATTTTATAATTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAACTAAGACTCATATTCCATCACCAGAATAATTTTATAATTTTAA  500

seq1  TAATATATTTGTGATCCTAATCCATGTACTTGATGTACATCTATTAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATTTGTGATCCTAATCCATGTACTTGATGTACATCTATTAAAAT  550

seq1  GTTAAAGAAATTAAGCAGTGACGGCTAGATCTCTTTGTGAAGCTATATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGAAATTAAGCAGTGACGGCTAGATCTCTTTGTGAAGCTATATTC  600

seq1  AATTGCTTAATATAATTTAGTTGGATGATAATAAAGGGAGAGATAGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTAATATAATTTAGTTGGATGATAATAAAGGGAGAGATAGGAGG  650

seq1  TAAGACATTAGCATACTCAATATGTAAAAGGGGGTTGTGGAAAGGGATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACATTAGCATACTCAATATGTAAAAGGGGGTTGTGGAAAGGGATTG  700

seq1  TGGTAAAAGCCTGTGCATTCAGAGCCAATCGCTGCCATTTGTTAGTCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAAGCCTGTGCATTCAGAGCCAATCGCTGCCATTTGTTAGTCTTA  750

seq1  ATTTAAAAATCTGTAAGAAAGCATCAAAATCACTTCTGCTCAGCTTTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAATCTGTAAGAAAGCATCAAAATCACTTCTGCTCAGCTTTAAT  800

seq1  GAGACAGCTCGAGCAGGAATCTATTCACTTACCTGCTCTAATTAGCATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGCTCGAGCAGGAATCTATTCACTTACCTGCTCTAATTAGCATGC  850

seq1  GTATGTCCTCCACGTCAAGTCTGACAATACACTCAACTAAATTAATGTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCCTCCACGTCAAGTCTGACAATACACTCAACTAAATTAATGTTC  900

seq1  ATCTCCTAACAGAACCACATTTGAGTTAGTAGCTCTGACACAGAATTTGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTAACAGAACCACATTTGAGTTAGTAGCTCTGACACAGAATTTGC  950

seq1  ATATTAACATTTTCATAATGAATAGCTAGTGAGGGTGAGGCTGGAAAAGA  1000
      |||||||||||||||||||| ||||||||||| ||||||||||| |||||
seq2  ATATTAACATTTTCATAATG-ATAGCTAGTGA-GGTGAGGCTGGGAAAGA  998

seq1  GATGTGCGAGATCTAAAAAAATGGGAAGGAAACTGAGGTTCAAGGAGGTT  1050
      ||||||||||||||  ||||||||||||||||||||||||||||||||||
seq2  GATGTGCGAGATCT--AAAAATGGGAAGGAAACTGAGGTTCAAGGAGGTT  1046

seq1  TGGCT-GTGAAGCACCTGGCAAGTGGGGTACTGGGTTCCAAT-GCATCAG  1098
      ||||| ||||||||| ||   ||| |||||||||| | |||| |||||| 
seq2  TGGCTGGTGAAGCACTTG--CAGT-GGGTACTGGGGTTCAATGGCATCAA  1093

seq1  ACACCCAAGGTTTCCTTTCCGCCTTTGCTCCATGGTACAGAGCAGCCCTG  1148
      || ||||||||   |||| || ||||||| ||||||||||||||  ||||
seq2  AC-CCCAAGGT---CTTTTCGGCTTTGCT-CATGGTACAGAGCA-TCCTG  1137

seq1  TG  1150
      ||
seq2  TG  1139