BAC Information

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BAC

Clone NameB6Ng01-117L06
Chromosome18 (Build37)
Map Location 8,106,594 - 8,107,712
singlet/doubletsinglet
Overlap genenone
Upstream geneArmc4, Mpp7, EG622384, LOC100039562, LOC100039606, Wac, LOC665121, LOC225134
Downstream geneLOC665132, EG433158, EG545242, LOC665161
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117L06.bB6Ng01-117L06.g
ACCDH922375DH922376
length1,1171,161
definitionDH922375|Mus musculus domesticus DNA, BAC clone: B6Ng01-117L06, 5' end.DH922376|Mus musculus domesticus DNA, BAC clone: B6Ng01-117L06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcactaaaagtccattttgaggacacagtttacattattgcaga
tgcacccaagtcaagatcaccatagatcctgcataaataatccatgacat
atgtcttagttacggttttactgctgtgaacagacaccatgaccaaggca
agtcttataaaaaacaacatttaattggggatggcttacaggttcagagg
ttcagtccattatcatcaaggtgagagcatggcattatccaggcaggcat
ggcgcagtaggagctgagagttctatgtcttcatccaaaggctgctagtg
gaagactgacttccaggcaactagggtgaggatcttatacccacacccag
agtgacacacccattccaaccaggtcacacctattccaacaaggccacaa
cttcagatggtaccactccctggtccaaggatatacaaaccatcacaaca
tactaaagtaaggatatcactaaagtgcaacttggtgaaccaataacttt
tatgggggtttcttatggaggtatgggggatggcttactgacaggaggag
aaatgatgtaaatcaagttgtatcaccaaaacccctcctcagctgaagag
agctggaaatctgacatgcactacacaactatctgagcctctgaggaggc
tcaacaacctgtgaagtgtcttttcagatagcttgcctggtcgttgcctc
tcctaggaagctcagctagtctaaatagcttgtctgaaagtgtctctcaa
ctgtccttagtgtctacttataggacatctttgcacttgatggcctcttg
gttctgttttgtaagcccccctcccacgtatgctttatttcttccaggaa
gtatttgcaaattattttctatcttgataattgtgttcattatgaagcct
ttggtcgtttttattacttctcatcctgaatggtgtctgatcagggtgct
ccccgtgttacatgactgtaattctgaaggtatcaagtctcattttcatt
cctggacccttctcctccctttctttctatgcatttaccatacgctttgt
tactggtgggtgggatggtaacctaggtgttttagaagccttaggcctat
tcaaaggattgaaataa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaatactgaga
ttccacttcactccagtcagaatggcaaagatcaaaaactcaggtgacag
cagatgctggcaaggatgtgtagaaaggggaacactcctccattgttggt
ggaattgcaatcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccgcaggatcccgcaatacctctcctggg
catatatccagaagatgtcccaaccggtaagaagaacacatgctccacta
tgttcatagcagccttgtttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggaatactactcagctatttaaaaaaatgaatttatgaaattcctaggca
aatggatggacctggagggtatcatcctgagtgaagtaacccaatcacaa
aggaactcgcacaatatgtactcactgataagtggatattagcccagaaa
cttaggatacccaagatataagatacaacttgccaagtgcatgaaattca
agaagaacgaagaccaaagtgtggacactttaccctttcttagaaatggg
aataaaacacccatagaaggagttacagagacaaaatttggagctgtgac
gaaaggatggaccatctagtgattgattgccatatgcagggatccatccc
ataatcagcttccaaatgctgacaccattgcatacactagcaagatttcg
ctgaaaggacccagatatagctctctcttgtgagactatgccggggccta
gcaaacacagaagtggatgatcacagtcagctattggatgggtcacaagc
ccctaatggaggagctagagaattacccaggagctaagggactgcaccct
atagtgacacaatatgaactaccagtacccggagctctttgtctttagct
gcatatatttcaaagatgctagtcagcatcactgcaaagaaaggtcatgg
aacttgcactttatgccagtaagggacgcccaggcaaaggggagtggtgg
tggaaggaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_8106594_8107712
seq2: B6Ng01-117L06.b_46_1162

seq1  GAATTCTCACTAAAAGTCCATTTTGAGGACACAGTTTACATTATTGCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTAAAAGTCCATTTTGAGGACACAGTTTACATTATTGCAGA  50

seq1  TGCACCCAAGTCAAGATCACCATAGATCCTGCATAAATAATCCATGACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCCAAGTCAAGATCACCATAGATCCTGCATAAATAATCCATGACAT  100

seq1  ATGTCTTAGTTACGGTTTTACTGCTGTGAACAGACACCATGACCAAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTAGTTACGGTTTTACTGCTGTGAACAGACACCATGACCAAGGCA  150

seq1  AGTCTTATAAAAAACAACATTTAATTGGGGATGGCTTACAGGTTCAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTATAAAAAACAACATTTAATTGGGGATGGCTTACAGGTTCAGAGG  200

seq1  TTCAGTCCATTATCATCAAGGTGAGAGCATGGCATTATCCAGGCAGGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCCATTATCATCAAGGTGAGAGCATGGCATTATCCAGGCAGGCAT  250

seq1  GGCGCAGTAGGAGCTGAGAGTTCTATGTCTTCATCCAAAGGCTGCTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCAGTAGGAGCTGAGAGTTCTATGTCTTCATCCAAAGGCTGCTAGTG  300

seq1  GAAGACTGACTTCCAGGCAACTAGGGTGAGGATCTTATACCCACACCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTGACTTCCAGGCAACTAGGGTGAGGATCTTATACCCACACCCAG  350

seq1  AGTGACACACCCATTCCAACCAGGTCACACCTATTCCAACAAGGCCACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACACACCCATTCCAACCAGGTCACACCTATTCCAACAAGGCCACAA  400

seq1  CTTCAGATGGTACCACTCCCTGGTCCAAGGATATACAAACCATCACAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGATGGTACCACTCCCTGGTCCAAGGATATACAAACCATCACAACA  450

seq1  TACTAAAGTAAGGATATCACTAAAGTGCAACTTGGTGAACCAATAACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAAGTAAGGATATCACTAAAGTGCAACTTGGTGAACCAATAACTTT  500

seq1  TATGGGGGTTTCTTATGGAGGTATGGGGGATGGCTTACTGACAGGAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGGGTTTCTTATGGAGGTATGGGGGATGGCTTACTGACAGGAGGAG  550

seq1  AAATGATGTAAATCAAGTTGTATCACCAAAACCCCTCCTCAGCTGAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATGTAAATCAAGTTGTATCACCAAAACCCCTCCTCAGCTGAAGAG  600

seq1  AGCTGGAAATCTGACATGCACTACACAACTATCTGAGCCTCTGAGGAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAAATCTGACATGCACTACACAACTATCTGAGCCTCTGAGGAGGC  650

seq1  TCAACAACCTGTGAAGTGTCTTTTCAGATAGCTTGCCTGGTCGTTGCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAACCTGTGAAGTGTCTTTTCAGATAGCTTGCCTGGTCGTTGCCTC  700

seq1  TCCTAGGAAGCTCAGCTAGTCTAAATAGCTTGTCTGAAAGTGTCTCTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGAAGCTCAGCTAGTCTAAATAGCTTGTCTGAAAGTGTCTCTCAA  750

seq1  CTGTCCTTAGTGTCTACTTATAGGACATCTTTGCACTTGATGGCCTCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTTAGTGTCTACTTATAGGACATCTTTGCACTTGATGGCCTCTTG  800

seq1  GTTCTGTTTTGTAAGCCCCCCTCCCACGTATGCTTTATTTCTTCCAGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTTTGTAAGCCCCCCTCCCACGTATGCTTTATTTCTTCCAGGAA  850

seq1  GTATTTGCAAATTATTTTCTATCTTGATAATTGTGTTCATTATGAAGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGCAAATTATTTTCTATCTTGATAATTGTGTTCATTATGAAGCCT  900

seq1  TTGGTCGTTTTTATTACTTCTCAT-CTGAATGGTGTCTGATCAGGGGTGC  949
      |||||||||||||||||||||||| |||||||||||||||||| ||||||
seq2  TTGGTCGTTTTTATTACTTCTCATCCTGAATGGTGTCTGATCA-GGGTGC  949

seq1  TCCCCGTGTTACATGACTGTAATTCTGAAGGTATCAGGTCTCAATCTCAT  999
      |||||||||||||||||||||||||||||||||||| |||||| | ||||
seq2  TCCCCGTGTTACATGACTGTAATTCTGAAGGTATCAAGTCTCATTTTCAT  999

seq1  TCCTGGACACTTCTCCTCCCCTTTCTTCTTATGCATTTAACCATACGCTT  1049
      |||||||| |||||||| |||||||||  ||||||||| |||||||||||
seq2  TCCTGGACCCTTCTCCT-CCCTTTCTTTCTATGCATTT-ACCATACGCTT  1047

seq1  TGTTACTGGTGGTTGGGAT-GTAAACTAGGTGTTTTTAGATGCTTAAGTC  1098
      |||||||||||| |||||| |||| ||||||| ||||||| || | || |
seq2  TGTTACTGGTGGGTGGGATGGTAACCTAGGTG-TTTTAGAAGCCTTAGGC  1096

seq1  TTATTCAAATGATTGAAATAA  1119
       |||||||| |||||||||||
seq2  CTATTCAAAGGATTGAAATAA  1117