BAC Information

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BAC

Clone NameB6Ng01-119E05
Chromosome18 (Build37)
Map Location 56,317,155 - 56,468,448
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667401, LOC667409, LOC629043, LOC100043099, LOC629057, LOC100043104
Downstream geneLOC676543, LOC667432, Gramd3, LOC667458, Aldh7a1, Rnuxa, 1700065I17Rik, LOC675171, Lmnb1, March3, C330018D20Rik, Megf10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119E05.bB6Ng01-119E05.g
ACCDH923525DH923526
length1,030918
definitionDH923525|Mus musculus domesticus DNA, BAC clone: B6Ng01-119E05, 5' end.DH923526|Mus musculus domesticus DNA, BAC clone: B6Ng01-119E05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,317,155 - 56,318,194)(56,467,936 - 56,468,448)
sequence
gaattctgggtccaggtccatcacctgtgaaggaaaactatgtaaaagtc
cggcctctggtactgcctctcccaccctcgaaaatgactcagtatttcag
agatgtatttttaaaatgtgcatctttattgttaatatgattctggccac
acaggtctcattccaacagcatgttgggtaatcagataataattgtgttt
atccagtgatataaaggatatctctccatactaattcacatgcttatttg
agtcttgttctattttaatcattcatgtgtctacttttgctaagtacttc
cttattcttttccttgtttgtactattagattattttctcttattcatga
gtaactttttgttattatactgttgaaaataccttctctggctcattgct
tatctttgaactttgtattttatgatatgtttattttttgtcttaaacag
gttgttcttttattttacagtttatatgttatatgaatttctttacatat
atgtcataaaaccaaaaaagtaataaaatgtacatttttacaaaatcatt
tgctactcttgatgtaagtgctcaaccaaaaatatataggaaattattta
actagggaacccagacagtctatcactgcgaaataaataagaatgggctt
tcaaacagcctgaaagaccccgagatatgcagatatagttctttgatatg
gcatggtataatgtagtgggttggagtggagaatttattgctacatgtag
gaatggagacttggaagaaagacagaagagaaaagtctccatagtgtaga
gtgtgcctgtttagctgtggttgttactgcttcctgtgtttcagagatga
tgaaggaagaatcagaatggtcactttgatcttgaagtaagtatctcagt
ttgtcacctaagcacccagagagctgctcttctgggactgatccccatga
tgtttgtctttcatgtgcattgattcatgctaattgtgaggttaaccgaa
ctaaattttaaattaaattaattgttttaa
gaattctagtgcatgggctcaagaaatggtttagcagttaagagagcttg
ttgcttttgcagaagactggagttttgttcctagcacccgtgttttagtt
gtaggcacatgcatacatgtgtacacatatgcacacatacaatataaata
tatatatatgtatatatgtgtatatatatacacacacatacacacacaca
tatatacatatacatgtgtgtgtgtgatgcatacatatgcatatatgtga
tggcttgtatatgttcagcccagggagtggcaggattagaaggtgtggcc
ctattgaaataggtgtgtcactgtgggcatggggcttaagaccctattcc
tagctgcctggaagtcagtagtctcatagcagccttcagatgaagatgta
gaactctcagcttctcctacaccaagcctgcctggatgctgccatgttcc
taccttgatgataatggactgaacctctgaacctgtaagccagccccaat
taaatgttgtcctttataagacttgcattgggatagggaactaatggcca
atatatacaaagagctcaagaagctggtctccagaaattcaaataacccc
attaaaaatggggtacagagctaaacaaagaattcccaaatgaggaatag
tgaagggctaggaagcacctgaaaaactgttcaacatccttaatcatcat
ggaaatgcaaaatcaaaacaaccttgagattccacctcacaccagtcaga
atggctaagatcaaaaattcatgtgacagcagatgctggcgaggatgtgg
agaaagagaaacactcctccattgctggtgggatgcaagcttgtacaacc
actctggaaatcagtctggtggtcctcagaaaatgggacattattattac
tggaggatccagcaatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_56317155_56318194
seq2: B6Ng01-119E05.b_44_1073

seq1  GAATTCTGGGTCCAGGTCCATCACCTGTGAAGGAAAACTATGTAAAAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTCCAGGTCCATCACCTGTGAAGGAAAACTATGTAAAAGTC  50

seq1  CGGCCTCTGGTACTGCCTCTCCCACCCTCGAAAATGACTCAGTATTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCTCTGGTACTGCCTCTCCCACCCTCGAAAATGACTCAGTATTTCAG  100

seq1  AGATGTATTTTTAAAATGTGCATCTTTATTGTTAATATGATTCTGGCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTATTTTTAAAATGTGCATCTTTATTGTTAATATGATTCTGGCCAC  150

seq1  ACAGGTCTCATTCCAACAGCATGTTGGGTAATCAGATAATAATTGTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCTCATTCCAACAGCATGTTGGGTAATCAGATAATAATTGTGTTT  200

seq1  ATCCAGTGATATAAAGGATATCTCTCCATACTAATTCACATGCTTATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTGATATAAAGGATATCTCTCCATACTAATTCACATGCTTATTTG  250

seq1  AGTCTTGTTCTATTTTAATCATTCATGTGTCTACTTTTGCTAAGTACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTGTTCTATTTTAATCATTCATGTGTCTACTTTTGCTAAGTACTTC  300

seq1  CTTATTCTTTTCCTTGTTTGTACTATTAGATTATTTTCTCTTATTCATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCTTTTCCTTGTTTGTACTATTAGATTATTTTCTCTTATTCATGA  350

seq1  GTAACTTTTTGTTATTATACTGTTGAAAATACCTTCTCTGGCTCATTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTTTTGTTATTATACTGTTGAAAATACCTTCTCTGGCTCATTGCT  400

seq1  TATCTTTGAACTTTGTATTTTATGATATGTTTATTTTTTGTCTTAAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTGAACTTTGTATTTTATGATATGTTTATTTTTTGTCTTAAACAG  450

seq1  GTTGTTCTTTTATTTTACAGTTTATATGTTATATGAATTTCTTTACATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCTTTTATTTTACAGTTTATATGTTATATGAATTTCTTTACATAT  500

seq1  ATGTCATAAAACCAAAAAAGTAATAAAATGTACATTTTTACAAAATCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATAAAACCAAAAAAGTAATAAAATGTACATTTTTACAAAATCATT  550

seq1  TGCTACTCTTGATGTAAGTGCTCAACCAAAAATATATAGGAAATTATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTCTTGATGTAAGTGCTCAACCAAAAATATATAGGAAATTATTTA  600

seq1  ACTAGGGAACCCAGACAGTCTATCACTGCGAAATAAATAAGAATGGGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGGAACCCAGACAGTCTATCACTGCGAAATAAATAAGAATGGGCTT  650

seq1  TCAAACAGCCTGAAAGACCCCGAGATATGCAGATATAGTTCTTTGATATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAGCCTGAAAGACCCCGAGATATGCAGATATAGTTCTTTGATATG  700

seq1  GCATGGTATAATGTAGTGGGTTGGAGTGGAGAATTTATTGCTACATGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTATAATGTAGTGGGTTGGAGTGGAGAATTTATTGCTACATGTAG  750

seq1  GAATGGAGACTTGGAAGAAAGACAGAAGAGAAAAGTCTCCATAGTGTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGAGACTTGGAAGAAAGACAGAAGAGAAAAGTCTCCATAGTGTAGA  800

seq1  GTGTGCCTTGTTTAGCTGTGGTTGTTACTGCTCCCTGTGTATCAGAGATG  850
      ||||||| |||||||||||||||||||||||| ||||||| |||||||||
seq2  GTGTGCC-TGTTTAGCTGTGGTTGTTACTGCTTCCTGTGTTTCAGAGATG  849

seq1  ATG-AGGAAGAAGTCAGAATGGTCACTTGATTCTTGAAGTAAGTATCTCA  899
      ||| |||||||| |||||||||||||||   |||||||||||||||||||
seq2  ATGAAGGAAGAA-TCAGAATGGTCACTTTGATCTTGAAGTAAGTATCTCA  898

seq1  GTTTGTCACCCTAGGCACCCAGAGAGCTGCTTCTTCTTGGACTGAT-CCC  948
      |||||||| |||| |||||||||||||||| |||||| |||||||| |||
seq2  GTTTGTCA-CCTAAGCACCCAGAGAGCTGC-TCTTCTGGGACTGATCCCC  946

seq1  ATGATGTTTGTTCTTTCAATGTGCATTGATTTCATGCTGATTGTTGAGGT  998
      |||||||||| |||||| ||||||||||| |||||||| |||| ||||||
seq2  ATGATGTTTG-TCTTTC-ATGTGCATTGA-TTCATGCTAATTG-TGAGGT  992

seq1  TAACCGAACTGAAATTTTAAATTAATATTTAATTTGTTTTAA  1040
      |||||||||| |||||||||||||| |||  | |||||||||
seq2  TAACCGAACT-AAATTTTAAATTAA-ATT--AATTGTTTTAA  1030

seq1: chr18_56467936_56468448
seq2: B6Ng01-119E05.g_70_582 (reverse)

seq1  AGGACAACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCAT  50

seq1  TATCATCAAGGTAGGAACATGGCAGCATCCAGGCAGGCTTGGTGTAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCAAGGTAGGAACATGGCAGCATCCAGGCAGGCTTGGTGTAGGAG  100

seq1  AAGCTGAGAGTTCTACATCTTCATCTGAAGGCTGCTATGAGACTACTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAGAGTTCTACATCTTCATCTGAAGGCTGCTATGAGACTACTGAC  150

seq1  TTCCAGGCAGCTAGGAATAGGGTCTTAAGCCCCATGCCCACAGTGACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGCAGCTAGGAATAGGGTCTTAAGCCCCATGCCCACAGTGACACA  200

seq1  CCTATTTCAATAGGGCCACACCTTCTAATCCTGCCACTCCCTGGGCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTCAATAGGGCCACACCTTCTAATCCTGCCACTCCCTGGGCTGAA  250

seq1  CATATACAAGCCATCACATATATGCATATGTATGCATCACACACACACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACAAGCCATCACATATATGCATATGTATGCATCACACACACACAT  300

seq1  GTATATGTATATATGTGTGTGTGTATGTGTGTGTATATATATACACATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGTATATATGTGTGTGTGTATGTGTGTGTATATATATACACATAT  350

seq1  ATACATATATATATATTTATATTGTATGTGTGCATATGTGTACACATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATATATATATTTATATTGTATGTGTGCATATGTGTACACATGTA  400

seq1  TGCATGTGCCTACAACTAAAACACGGGTGCTAGGAACAAAACTCCAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGCCTACAACTAAAACACGGGTGCTAGGAACAAAACTCCAGTCT  450

seq1  TCTGCAAAAGCAACAAGCTCTCTTAACTGCTAAACCATTTCTTGAGCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAAAGCAACAAGCTCTCTTAACTGCTAAACCATTTCTTGAGCCCA  500

seq1  TGCACTAGAATTC  513
      |||||||||||||
seq2  TGCACTAGAATTC  513