BAC Information

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BAC

Clone NameB6Ng01-119J24
Chromosome18 (Build37)
Map Location 27,497,235 - 27,498,350
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665977
Downstream geneEG665646, EG271505
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119J24.bB6Ng01-119J24.g
ACCDH923788DH923789
length1,1611,105
definitionDH923788|Mus musculus domesticus DNA, BAC clone: B6Ng01-119J24, 5' end.DH923789|Mus musculus domesticus DNA, BAC clone: B6Ng01-119J24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctaggttgttttgatttgcatttccctgatcattaaggatgtt
aaaatttttttcaggtgcttctcagcccttcagtattcctcagcttagaa
ttctttgtttagctctgaaccccatttttaatggggttatttaaatttct
gaagtccagcaacttgagctctttgtatatattggatattagtcccctat
cagatttagaattggtaaaaattctttcacaatcttttggtggccttttt
ttgtcttattggcagtgttttttgccttacagaagctttgaaattttatg
aggtcccatttgtcaattcttgatcttacagcacaagccattgctgtttt
gtttaggatttttttcccctgtgcacatatctttgaggctttcccccact
tcctcctctataaatttcaatgtctctgtttttatttggaattctttgat
ccacttagacttgagatttgtacaaggtgataagaatggatcaattcaaa
ttcttataaatgatatctgccagttctgccagcaccatttattgaaaatg
ctgtctttttccacttaatggttttagctcctttgtcaaagatcaagtaa
ccataggtgtgtggattaatttctgggtcttcaattctattccattgatc
tacctgtctgttgctgtaccagtaccacgcagttttttatcacaattgct
ctgtagtacagttgaggtcaagcatggttattctaccagaagttcttcta
ttgttgagaatagtttttgctatcttaggttttttgttattccattgaat
ttgcacattgccctttctaactcagtgaagaattgagttggattttgaga
gagattgcattgcatctgtagatttctttcagcaaggtagccatttttac
tatattaatcttgccaatccatgagcatgggagatctttctatcttctgg
agtttctttctgaagttctatcatacagatcttttacttccttagtagag
tcacaccaaggtattttatatttttttgactatatggagggtgttgttcc
ctaacttcttttctcagctttaatctttggatagacaaagacccatggct
ttatttgagttattatatctagctactgacctggagctgatattaaggcc
tcagggatctc
gaattctttacatagagaatagtgtgagacaaatcatagaataccttgta
acgagaaaggtagcacaaatacttttgtattaataaaagttgctttttaa
tattttcacacatgtatagagtgtattctaggagtaggaggtatctccca
ctggtaaaagccaaacactgttcttgtataagtgctagtttctgtgctca
gaaaccacatggtgttttgcaactttctctgaccccaggccaggctgatc
tgaaagcttcttttgtttccatgggtactagatgaattaggtatgtatac
atacatggaggtaaacattcaaacacgtgaaaaaaataaaattttattct
aattacaacccatactctccccatacatttcatacatttcccacatttgt
atgtttattttgttttttgccccctgaccctgactagggccttctatatg
attatgggcttgaaattgtacaactgagcattatgggatcatcagtaggt
acaaaactaagacaaagtatattttattggaaaaataaagatacctcctt
agataccaatcaacatacattacagtaagccagttttatgaaaaattaac
ctctttattttccttaactttattcaaaccaaggacaaatataactttaa
tttaataaaaacaatgtattaaataactctagcacactgataaaaataca
aatgacaataatatcataataggagagagaaggatagtttaaatatttat
actgcaatacagaatactaatagttgaaattagtatttttaaatgtatat
tgtcaacctatgaaaccactgtaacagtgcattattttccagaagtgtaa
agcctatgccagagatataagcggtttcatgcagaacgttgagctatgaa
tgaagatatagcaatggaaaataagtgaagaggtaaacaaagcaagagaa
taaagcagagggagtctagggttgacccatctaactcagtgatctttgaa
attgtgttgtagataaaaaataactgcagaaaagcagatgacctgaatat
tctgtatactttaattatactgttagcggaaaaaaatagattggaaatga
ttaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_27497235_27498350
seq2: B6Ng01-119J24.g_69_1173 (reverse)

seq1  TGTAATCATTTCCACTCTATTTTTATCCCGCTAAACAGTATAATTAAAGT  50
      |||||||||||||| ||||||||| | ||||| |||||||||||||||||
seq2  TGTAATCATTTCCAATCTATTTTT-TTCCGCT-AACAGTATAATTAAAGT  48

seq1  ATACAGAATATTCAGGTCAATCTGCTTTTTCTGCAGTTATTTTTTATCTA  100
      |||||||||||||||||| |||||| ||||||||||||||||||||||||
seq2  ATACAGAATATTCAGGTC-ATCTGC-TTTTCTGCAGTTATTTTTTATCTA  96

seq1  CAACACAAATTTCAAAAGATCACTGAGTTAGATGGGTCAAACCCTAGACT  150
      |||||| |||||| |||||||||||||||||||||||| |||||||||||
seq2  CAACAC-AATTTC-AAAGATCACTGAGTTAGATGGGTC-AACCCTAGACT  143

seq1  CCCTCTGCTTTATTCTCTTTGCTTTTGTTTTACCTCTTCACTTATTTTTC  200
      ||||||||||||||||| |||||||   |||||||||||||||| |||||
seq2  CCCTCTGCTTTATTCTC-TTGCTTT--GTTTACCTCTTCACTTA-TTTTC  189

seq1  CATTGCTATATCTTCATTCATAGCTCAACGTTCTGCATGAAACCGCTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTATATCTTCATTCATAGCTCAACGTTCTGCATGAAACCGCTTAT  239

seq1  ATCTCTGGCATAGGCTTTACACTTCTGGAAAATAATGCACTGTTACAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGCATAGGCTTTACACTTCTGGAAAATAATGCACTGTTACAGTG  289

seq1  GTTTCATAGGTTGACAATATACATTTAAAAATACTAATTTCAACTATTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATAGGTTGACAATATACATTTAAAAATACTAATTTCAACTATTAG  339

seq1  TATTCTGTATTGCAGTATAAATATTTAAACTATCCTTCTCTCTCCTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGTATTGCAGTATAAATATTTAAACTATCCTTCTCTCTCCTATTA  389

seq1  TGATATTATTGTCATTTGTATTTTTATCAGTGTGCTAGAGTTATTTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTATTGTCATTTGTATTTTTATCAGTGTGCTAGAGTTATTTAATA  439

seq1  CATTGTTTTTATTAAATTAAAGTTATATTTGTCCTTGGTTTGAATAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTTTTATTAAATTAAAGTTATATTTGTCCTTGGTTTGAATAAAGT  489

seq1  TAAGGAAAATAAAGAGGTTAATTTTTCATAAAACTGGCTTACTGTAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAAATAAAGAGGTTAATTTTTCATAAAACTGGCTTACTGTAATGT  539

seq1  ATGTTGATTGGTATCTAAGGAGGTATCTTTATTTTTCCAATAAAATATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGATTGGTATCTAAGGAGGTATCTTTATTTTTCCAATAAAATATAC  589

seq1  TTTGTCTTAGTTTTGTACCTACTGATGATCCCATAATGCTCAGTTGTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTAGTTTTGTACCTACTGATGATCCCATAATGCTCAGTTGTACA  639

seq1  ATTTCAAGCCCATAATCATATAGAAGGCCCTAGTCAGGGTCAGGGGGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAGCCCATAATCATATAGAAGGCCCTAGTCAGGGTCAGGGGGCAA  689

seq1  AAAACAAAATAAACATACAAATGTGGGAAATGTATGAAATGTATGGGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAATAAACATACAAATGTGGGAAATGTATGAAATGTATGGGGAG  739

seq1  AGTATGGGTTGTAATTAGAATAAAATTTTATTTTTTTCACGTGTTTGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGGTTGTAATTAGAATAAAATTTTATTTTTTTCACGTGTTTGAAT  789

seq1  GTTTACCTCCATGTATGTATACATACCTAATTCATCTAGTACCCATGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCTCCATGTATGTATACATACCTAATTCATCTAGTACCCATGGAA  839

seq1  ACAAAAGAAGCTTTCAGATCAGCCTGGCCTGGGGTCAGAGAAAGTTGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGAAGCTTTCAGATCAGCCTGGCCTGGGGTCAGAGAAAGTTGCAA  889

seq1  AACACCATGTGGTTTCTGAGCACAGAAACTAGCACTTATACAAGAACAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCATGTGGTTTCTGAGCACAGAAACTAGCACTTATACAAGAACAGT  939

seq1  GTTTGGCTTTTACCAGTGGGAGATACCTCCTACTCCTAGAATACACTCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCTTTTACCAGTGGGAGATACCTCCTACTCCTAGAATACACTCTA  989

seq1  TACATGTGTGAAAATATTAAAAAGCAACTTTTATTAATACAAAAGTATTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTGTGAAAATATTAAAAAGCAACTTTTATTAATACAAAAGTATTT  1039

seq1  GTGCTACCTTTCTCGTTACAAGGTATTCTATGATTTGTCTCACACTATTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTACCTTTCTCGTTACAAGGTATTCTATGATTTGTCTCACACTATTC  1089

seq1  TCTATGTAAAGAATTC  1116
      ||||||||||||||||
seq2  TCTATGTAAAGAATTC  1105