BAC Information

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BAC

Clone NameB6Ng01-120D14
Chromosome18 (Build37)
Map Location 60,123,392 - 60,124,327
singlet/doubletsinglet
Overlap genenone
Upstream geneAdamts19, A730017C20Rik, 4833446K15Rik, LOC667549
Downstream geneEG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1, EG629292, LOC667597, 2010002N04Rik, Dctn4, Rbm22, Myoz3, Synpo, LOC100042675, Ndst1, Rps14, LOC667619, Cd74, Tcof1, LOC100042699, Arsi, Camk2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120D14.bB6Ng01-120D14.g
ACCDH924223DH924224
length1,226933
definitionDH924223|Mus musculus domesticus DNA, BAC clone: B6Ng01-120D14, 5' end.DH924224|Mus musculus domesticus DNA, BAC clone: B6Ng01-120D14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtatattttagatagtagtcctctatcagctgtggagttgg
ttaaaaaaacaaaaacaaaaacaaaaccattttccattctgaagcctgat
gctttgacccactgaggataccttttgccagatagaagtttttcagtttc
ctgaggttctatttattaattgttgatcttagtacttgtgctattaacgt
tctcttcagaaagtcattttttgtgccaatgtattcaaggctattcttca
tgttctcttctatcatttcagtgtgtctgttgaccctttgatccaattgg
acttgaattttgtgcaggagtgataaatatggatctatctgcatttttct
acgtgtgtatatccagtttgactagcaccaattattaaaaatgctgtttt
ttctaatgtgtatttctggcttctttatacaaaaaaaaaatgagacattc
gtagacatgtgagcttatgactggttcttcaactcaattccattaatcca
tgtgtctatttttgtaccaataccacggagtttttttcattactatagct
ctgtagaacaaaatgaaatagtgaaaggtgataaccctagcgattctttt
attgttcaaaattatttcagctattgtatttttttttttagcttcccata
tgaagttgagattgtcctttgcttttggtagaatggccatctgtactatg
ctaattcatgagcacaggagatctttccaccttatgatatcttctttaat
ttgttcctcaaacaaagacttgaagtttttatcattcaagatttttactt
gattagttgggattaacccaagatattttatattatttgttgctattgtg
aagggtattgtttccctgatttctttttcaatctgtctactgattttttt
ttttcattaatcgtgtttccatctccttcagtgaaagtgtttatctgctg
taggagttctctggtggaactttaggatcacttacaatactcttatgtca
tttgcaataacatacatttgcttttcctttctatttgtatccatgatctc
cttgtttatgctttagctaaactccagtatgaattaatagctatagagag
gagtgaccctctgtcttgttcggatttagtgaatggttggtttcctcatt
taagtgatgtgccataggtggtattgctattagttgtagtcctcattcta
atctctcgacacttactgtacgagta
gaattcagggttttatagttaggaaaatctagtcaaaagtttagtggagc
tgaaggtaagctgaggtgcaagagtatatgcataggagatccgtgaacat
gctggcttggaagtctgctaccccatagaacctgtgtttctgaaccaatt
cgggaggtttctcaatgagcatgtccagaggatgagaacatgtccagttg
agatagaagctgatcaagtgggtcagaaaccctaaagaagtagttccaag
aatgccttaacctgtggtcaggatgctagaatgtttcctacttctttgtt
gtctcctaaatcagcacatatgcctaaaatcaatatgggatcaggtgact
gtggtggtttaaataggcttagcccccatagattcatgtgcttcagtctc
ttcatgtgcttcagtctcctttcacaggcactcctttcccataagagagg
atctgtcccttgctgttttgaaataaacagcagacctgtctgctgtggtc
agactggtctctttctgcctcctgtctctacactgcctgtgaaatccaac
agtcaaaaatgaaagtttaaatagaagtgaaattttaatgtttaatcagt
tttcactcagtagatataaaatgttgcattttgcctagttttgttttgct
ttcttctgcactccaaaggctttactttcaatctttcccaaacgtgagca
tatagggaacaagcacacatatgtatacacacccacaggcctgcacagct
agtctgtctttctgtcctcccatcatgactgttagcatgttagcatccct
tctaggctctgcctaacagtacctagcaacagccaggttggcctagctta
ctataaagggactgtttggcctcccttcactctgtctgacccttttctct
ctcactctgacacttttctcctctctctccttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_60123392_60124327
seq2: B6Ng01-120D14.g_66_998

seq1  GAATTCAGGGTTTTATAGTTAGGAAAATCTAGTCAAAAGTTTAGTGGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGTTTTATAGTTAGGAAAATCTAGTCAAAAGTTTAGTGGAGC  50

seq1  TGAAGGTAAGCTGAGGTGCAAGAGTATATGCATAGGAGATCCGTGAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTAAGCTGAGGTGCAAGAGTATATGCATAGGAGATCCGTGAACAT  100

seq1  GCTGGCTTGGAAGTCTGCTACCCCATAGAACCTGTGTTTCTGAACCAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTTGGAAGTCTGCTACCCCATAGAACCTGTGTTTCTGAACCAATT  150

seq1  CGGGAGGTTTCTCAATGAGCATGTCCAGAGGATGAGAACATGTCCAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGGTTTCTCAATGAGCATGTCCAGAGGATGAGAACATGTCCAGTTG  200

seq1  AGATAGAAGCTGATCAAGTGGGTCAGAAACCCTAAAGAAGTAGTTCCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAAGCTGATCAAGTGGGTCAGAAACCCTAAAGAAGTAGTTCCAAG  250

seq1  AATGCCTTAACCTGTGGTCAGGATGCTAGAATGTTTCCTACTTCTTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTTAACCTGTGGTCAGGATGCTAGAATGTTTCCTACTTCTTTGTT  300

seq1  GTCTCCTAAATCAGCACATATGCCTAAAATCAATATGGGATCAGGTGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTAAATCAGCACATATGCCTAAAATCAATATGGGATCAGGTGACT  350

seq1  GTGGTGGTTTAAATAGGCTTAGCCCCCATAGATTCATGTGCTTCAGTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGTTTAAATAGGCTTAGCCCCCATAGATTCATGTGCTTCAGTCTC  400

seq1  TTCATGTGCTTCAGTCTCCTTTCACAGGCACTCCTTTCCCATAAGAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTGCTTCAGTCTCCTTTCACAGGCACTCCTTTCCCATAAGAGAGG  450

seq1  ATCTGTCCCTTGCTGTTTTGAAATAAACAGCAGACCTGTCTGCTGTGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCCCTTGCTGTTTTGAAATAAACAGCAGACCTGTCTGCTGTGGTC  500

seq1  AGACTGGTCTCTTTCTGCCTCCTGTCTCTACACTGCCTGTGAAATCCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGTCTCTTTCTGCCTCCTGTCTCTACACTGCCTGTGAAATCCAAC  550

seq1  AGTCAAAAATGAAAGTTTAAATAGAAGTGAAATTTTAATGTTTAATCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAAATGAAAGTTTAAATAGAAGTGAAATTTTAATGTTTAATCAGT  600

seq1  TTTCACTCAGTAGATATAAAATGTTGCATTTTGCCTAGTTTTGTTTTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTCAGTAGATATAAAATGTTGCATTTTGCCTAGTTTTGTTTTGCT  650

seq1  TTCTTCTGCACTCCAAAGGCTTTACTTTCAATCTTTCCCAAACGTGAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTGCACTCCAAAGGCTTTACTTTCAATCTTTCCCAAACGTGAGCA  700

seq1  TATAGGGAACAAGCACACATATGTATACACACCCACAGGCCTGCACAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGAACAAGCACACATATGTATACACACCCACAGGCCTGCACAGCT  750

seq1  AGTCTGTCTTTCTGTCCTCCCATCATGACTGTTAGCATGTTAGCATCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTCTTTCTGTCCTCCCATCATGACTGTTAGCATGTTAGCATCCCT  800

seq1  TCTAGGCTCTGCCTAACAGTTACCTAGCAACAGCCAGGTTGGCCTAGCTT  850
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCTAGGCTCTGCCTAACAG-TACCTAGCAACAGCCAGGTTGGCCTAGCTT  849

seq1  ACTATAAAAGGGACTGTTTGGCCTCCCTTCACTCTGTCTGACCCTTTTCT  900
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAT-AAAGGGACTGTTTGGCCTCCCTTCACTCTGTCTGACCCTTTTCT  898

seq1  CTCTCACTCTGACACTTTTCTCCCTCTCTCTCCTTC  936
      ||||||||||||||||||||| ||||||||||||||
seq2  CTCTCACTCTGACACTTTTCT-CCTCTCTCTCCTTC  933