BAC Information

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BAC

Clone NameB6Ng01-120G01
Chromosome18 (Build37)
Map Location 73,083,585 - 73,084,695
singlet/doubletsinglet
Overlap genenone
Upstream geneDcc, LOC629684, LOC100043411
Downstream geneLOC100042955, Rkhd2, Smad4, Elac1, Me2, Mro
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120G01.bB6Ng01-120G01.g
ACCDH924337DH924338
length1,0321,106
definitionDH924337|Mus musculus domesticus DNA, BAC clone: B6Ng01-120G01, 5' end.DH924338|Mus musculus domesticus DNA, BAC clone: B6Ng01-120G01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcgcctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttttacaaccactctggaaattagtctggcggttcctca
gaaaattggacctagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgctccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaatccctagccaa
atggatggacctggagggcatcatcctgagtgaggtgacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacaactatgcccttcttagattgggaac
aaaacacccatggaaaggagttacagagacaaagtttggagctgagatga
aaagatggaccatgtagagactgtcatatccagggaatcaccccatatta
gcatccaacgctgaaaccattgctaacatatgcaaggattttacttgaaa
ggacccgaatgtgctcttctcttgtgaagattatgtccggggccttagca
acacagaaaggtgatatcctcacagtcacttaaatgatggattccaaggg
cctcctcaatgagagagtctaaataagtatccaaggactaaagtgaatct
gcaaccctatagttgacacacttctatgaact
gaattccttggtaagtttgatgtttactggggaatacttatacttgtttt
tcttcatttaataacctcacctgtttgtaccgtaaaaacgatatcagcag
tcagacaattgcagccataaaggagttaactaaaccagaagctgacagag
tgagaaaggctagaagcagatggtattgtcaaatagaggtataattgcat
ttaaaaaaatctctgcaaaatagttcctcaagctttaggtaacttagatg
acatttagcaggttctggaaatcacttaaatgggtacagaaataaaagaa
tcacagaggaaaatgtcaccatctgaatttatcttgagttttactgagtt
gagacatctgagctcttgtaatacctaacaactgtttacagcccatagag
aggactgtgccagtgttgtggtgtgtttagcttatttagggggaaaggtc
atttttggctgttttgaggtttagtattctaaaatatgaagtttctggga
gaaggagaagtacgaattatccccatttccaatataggcaactcactgga
gtattttgggaacagaaacgaattcaattacagttgaaagcttcagggag
aaaggtcccctggtcactgttcagttgaggttcctcacaactgctgtata
aggtgcagcgagcaaggaatgttctataatcactgctgcaaagtccaaac
ctatcaatggggaaagctgagatttttttagagttgtaggacgtagtata
tctgaaagacctgagaaatatatccatataaatgtagagtgaagataaag
ttgtgacattaaacataaccttatttacaagtgaggtgatggaagaccat
ggagagctgatccagaactaagacttatgtagcctccagcattgcaacct
ctgagatgatgcacagtcagaagtattttgtgatcaagctatcaataaag
tagagatggaagccagtcctcatcacaaccctggacattaaaccaaggga
gaaatgtaaattccctgctaaggagaaatatattactgattcgaaggctg
ccctttaaaaaaatgaaaagctttacttaacgccataggtctctttcctc
tttgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_73083585_73084695
seq2: B6Ng01-120G01.g_65_1170 (reverse)

seq1  ATCAAAGGAGGAAAGAAGACCATAGACGTTAAGTAAAGCTATTTACATTT  50
      |||||| |||||||| |||||   | |||||||||||||| || |   ||
seq2  ATCAAA-GAGGAAAG-AGACCTATGGCGTTAAGTAAAGCTTTTCA---TT  45

seq1  TTTTTAAAGGCCAGGCTTTCTGATCAGTAATATA-TTCTGCCTAGCAGGG  99
      |||||||||| || || |||  |||||||||||| |||| | ||||||||
seq2  TTTTTAAAGGGCA-GCCTTCGAATCAGTAATATATTTCTCCTTAGCAGGG  94

seq1  ATTTTACATTTCTGCCTTGGTTT-ATGTCCAGGGTTGTGATGAGAACTGG  148
      | ||||||||||| ||||||||| |||||||||||||||||||| |||||
seq2  AATTTACATTTCTCCCTTGGTTTAATGTCCAGGGTTGTGATGAGGACTGG  144

seq1  CTTCCATCTCTTACTCTA-TGATAAGCTTGATCACAAAATACTTCTGACT  197
      |||||||||| |||| || |||| ||||||||||||||||||||||||||
seq2  CTTCCATCTC-TACTTTATTGAT-AGCTTGATCACAAAATACTTCTGACT  192

seq1  GTGCATCATCTCAGAGGTTGCAATGCTGGAGGCTACATAAGTCTTAGTTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCATCTCAGAGGTTGCAATGCTGGAGGCTACATAAGTCTTAGTTC  242

seq1  TGGATCAGCTCTCCATGGTCTTCCATCACCTCACTTGTAAATAAGGTTAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCAGCTCTCCATGGTCTTCCATCACCTCACTTGTAAATAAGGTTAT  292

seq1  GTTTAATGTCACAACTTTATCTTCACTCTACATTTATATGGATATATTTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATGTCACAACTTTATCTTCACTCTACATTTATATGGATATATTTC  342

seq1  TCAGGTCTTTCAGATATACTACGTCCTACAACTCTAAAAAAATCTCAGCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCTTTCAGATATACTACGTCCTACAACTCTAAAAAAATCTCAGCT  392

seq1  TTCCCCATTGATAGGTTTGGACTTTGCAGCAGTGATTATAGAACATTCCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCATTGATAGGTTTGGACTTTGCAGCAGTGATTATAGAACATTCCT  442

seq1  TGCTCGCTGCACCTTATACAGCAGTTGTGAGGAACCTCAACTGAACAGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCGCTGCACCTTATACAGCAGTTGTGAGGAACCTCAACTGAACAGTG  492

seq1  ACCAGGGGACCTTTCTCCCTGAAGCTTTCAACTGTAATTGAATTCGTTTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGGACCTTTCTCCCTGAAGCTTTCAACTGTAATTGAATTCGTTTC  542

seq1  TGTTCCCAAAATACTCCAGTGAGTTGCCTATATTGGAAATGGGGATAATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCAAAATACTCCAGTGAGTTGCCTATATTGGAAATGGGGATAATT  592

seq1  CGTACTTCTCCTTCTCCCAGAAACTTCATATTTTAGAATACTAAACCTCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACTTCTCCTTCTCCCAGAAACTTCATATTTTAGAATACTAAACCTCA  642

seq1  AAACAGCCAAAAATGACCTTTCCCCCTAAATAAGCTAAACACACCACAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCCAAAAATGACCTTTCCCCCTAAATAAGCTAAACACACCACAAC  692

seq1  ACTGGCACAGTCCTCTCTATGGGCTGTAAACAGTTGTTAGGTATTACAAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCACAGTCCTCTCTATGGGCTGTAAACAGTTGTTAGGTATTACAAG  742

seq1  AGCTCAGATGTCTCAACTCAGTAAAACTCAAGATAAATTCAGATGGTGAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGATGTCTCAACTCAGTAAAACTCAAGATAAATTCAGATGGTGAC  792

seq1  ATTTTCCTCTGTGATTCTTTTATTTCTGTACCCATTTAAGTGATTTCCAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTCTGTGATTCTTTTATTTCTGTACCCATTTAAGTGATTTCCAG  842

seq1  AACCTGCTAAATGTCATCTAAGTTACCTAAAGCTTGAGGAACTATTTTGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCTAAATGTCATCTAAGTTACCTAAAGCTTGAGGAACTATTTTGC  892

seq1  AGAGATTTTTTTAAATGCAATTATACCTCTATTTGACAATACCATCTGCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTTTTTTAAATGCAATTATACCTCTATTTGACAATACCATCTGCT  942

seq1  TCTAGCCTTTCTCACTCTGTCAGCTTCTGGTTTAGTTAACTCCTTTATGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCCTTTCTCACTCTGTCAGCTTCTGGTTTAGTTAACTCCTTTATGG  992

seq1  CTGCAATTGTCTGACTGCTGATATCGTTTTTACGGTACAAACAGGTGAGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAATTGTCTGACTGCTGATATCGTTTTTACGGTACAAACAGGTGAGG  1042

seq1  TTATTAAATGAAGAAAAACAAGTATAAGTATTCCCCAGTAAACATCAAAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAATGAAGAAAAACAAGTATAAGTATTCCCCAGTAAACATCAAAC  1092

seq1  TTACCAAGGAATTC  1111
      ||||||||||||||
seq2  TTACCAAGGAATTC  1106