BAC Information

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BAC

Clone NameB6Ng01-120P05
Chromosome18 (Build37)
Map Location 59,409,728 - 59,410,671
singlet/doubletsinglet
Overlap gene4833446K15Rik
Upstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik
Downstream geneLOC667549, EG240327, LOC546714
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120P05.bB6Ng01-120P05.g
ACCDH924759DH924760
length9451,130
definitionDH924759|Mus musculus domesticus DNA, BAC clone: B6Ng01-120P05, 5' end.DH924760|Mus musculus domesticus DNA, BAC clone: B6Ng01-120P05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcatcaaaatatgtattcattacatttcttaagataatatgct
tgactatatagatatactagaaagaggtgtggcccacaaacatggagaga
aagatgggttctttgatatgagcataggctgttcttcagttcataaccac
ctgaagtttcagttcaagatctgacacctctgatttccatgggcactgtc
actcatatgcacataactacacacacacacacacacacacacacacacac
acttcaatgggaaactcagatggcagaaaacaagatggttttggtagaaa
gaagtgttcacaactctcatgatcacagaactctttcttgtatcatactg
taaatcatataaccaaacgcaaccagctgtcactcactaaggaatatttt
gaaaagaaaactcctcctttcagatgacagattccatctgttttctcaat
aaatggcccaatttgtttatccaaatgacaaacaatattgacagttcatc
actctttggcgtggatcagtgctgcaataaaagggacatgctttgatgta
aacctttttcatgggtggtacacaattacatatctaggctggacaatgtg
taaacacagaaaggaaagctaacttacttctaagcttattaaactcccaa
ttattagaaaagtctgggcaaccctgaaggaaggaccaagtctttaaatt
ataacacatttttccttttctcaatctgggagggtttctcctacatatga
gtttacagagtctgtttctgatgaaggaaacagaaaggggtagggccaag
taactggagcagaaagaagcattacagtttagtcaagagttgattaattt
gacaaaataagacctcatgtgtgttcatgtgtgctttgtgcttgcatgtg
tatacatgtgtatggatgcttgcatgtgtgtacgtgtgtgtgtgt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctagacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctatggatggatcacaggctccatga
ggagctagagaaagtacccaagagctaaggatctcaccctatagtgacac
atatgactacagtaccctgagctctgactctagctgcatttgtatcaaag
atgctagtcgcatcactggaggagtcatgacccgactttggtgccggtac
aggaacgcagcaagggggatgtggtggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59409728_59410671
seq2: B6Ng01-120P05.b_48_992 (reverse)

seq1  ACACACACACACGTACACACATGCAAGCATCCATACACATGTATACACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACGTACACACATGCAAGCATCCATACACATGTATACACAT  50

seq1  GCAAGCACAAAGCACACATGAACACACATGAGGTCTTATTTTGTCAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCACAAAGCACACATGAACACACATGAGGTCTTATTTTGTCAAATT  100

seq1  AATCAACTCTTGACTAAACTGTAATGCTTCTTTCTGCTCCAGTTACTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACTCTTGACTAAACTGTAATGCTTCTTTCTGCTCCAGTTACTTGG  150

seq1  CCCTACCCC-TTCTGTTTCCTTCATCAGAAACAGACTCTGTAAACTCATA  199
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACCCCTTTCTGTTTCCTTCATCAGAAACAGACTCTGTAAACTCATA  200

seq1  TGTAGGAGAAACCCTCCCAGATTGAGAAAAGGAAAAATGTGTTATAATTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGAGAAACCCTCCCAGATTGAGAAAAGGAAAAATGTGTTATAATTT  250

seq1  AAAGACTTGGTCCTTCCTTCAGGGTTGCCCAGACTTTTCTAATAATTGGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTTGGTCCTTCCTTCAGGGTTGCCCAGACTTTTCTAATAATTGGG  300

seq1  AGTTTAATAAGCTTAGAAGTAAGTTAGCTTTCCTTTCTGTGTTTACACAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAATAAGCTTAGAAGTAAGTTAGCTTTCCTTTCTGTGTTTACACAT  350

seq1  TGTCCAGCCTAGATATGTAATTGTGTACCACCCATGAAAAAGGTTTACAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGCCTAGATATGTAATTGTGTACCACCCATGAAAAAGGTTTACAT  400

seq1  CAAAGCATGTCCCTTTTATTGCAGCACTGATCCACGCCAAAGAGTGATGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCATGTCCCTTTTATTGCAGCACTGATCCACGCCAAAGAGTGATGA  450

seq1  ACTGTCAATATTGTTTGTCATTTGGATAAACAAATTGGGCCATTTATTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCAATATTGTTTGTCATTTGGATAAACAAATTGGGCCATTTATTGA  500

seq1  GAAAACAGATGGAATCTGTCATCTGAAAGGAGGAGTTTTCTTTTCAAAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGATGGAATCTGTCATCTGAAAGGAGGAGTTTTCTTTTCAAAAT  550

seq1  ATTCCTTAGTGAGTGACAGCTGGTTGCGTTTGGTTATATGATTTACAGTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTAGTGAGTGACAGCTGGTTGCGTTTGGTTATATGATTTACAGTA  600

seq1  TGATACAAGAAAGAGTTCTGTGATCATGAGAGTTGTGAACACTTCTTTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAAGAAAGAGTTCTGTGATCATGAGAGTTGTGAACACTTCTTTCT  650

seq1  ACCAAAACCATCTTGTTTTCTGCCATCTGAGTTTCCCATTGAAGTGTGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAACCATCTTGTTTTCTGCCATCTGAGTTTCCCATTGAAGTGTGTG  700

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTAGTTATGTGCATATGAGTGACAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTAGTTATGTGCATATGAGTGACAG  750

seq1  TGCCCATGGAAATCAGAGGTGTCAGATCTTGAACTGAAACTTCAGGTGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGGAAATCAGAGGTGTCAGATCTTGAACTGAAACTTCAGGTGGT  800

seq1  TATGAACTGAAGAACAGCCTATGCTCATATCAAAGAACCCATCTTTCTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACTGAAGAACAGCCTATGCTCATATCAAAGAACCCATCTTTCTCT  850

seq1  CCATGTTTGTGGGCCACACCTCTTTCTAGTATATCTATATAGTCAAGCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTTGTGGGCCACACCTCTTTCTAGTATATCTATATAGTCAAGCAT  900

seq1  ATTATCTTAAGAAATGTAATGAATACATATTTTGATGAGGAATTC  944
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTAAGAAATGTAATGAATACATATTTTGATGAGGAATTC  945