BAC Information

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BAC

Clone NameB6Ng01-121P03
Chromosome18 (Build37)
Map Location 71,548,326 - 71,549,448
singlet/doubletsinglet
Overlap geneDcc
Upstream gene4930503L19Rik, Stard6, Poli, Mbd2, EG668032
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121P03.bB6Ng01-121P03.g
ACCDH925499DH925500
length1,115297
definitionDH925499|Mus musculus domesticus DNA, BAC clone: B6Ng01-121P03, 5' end.DH925500|Mus musculus domesticus DNA, BAC clone: B6Ng01-121P03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaatgaattaatcattaattatggtcaaaccccattgttcagg
aatatgcttaatgacaattacgacaataaatttatttatttatttttttg
gtatttgaagaaatgttgcagatacataggcctgacaaatgtatcaattg
tctctgcaaataaagtgtggcagttttctcatttgaatttaatgcgattt
aatcatgcaagagggatttggatcatagtagacttccctgggaattattt
ttggttatggatattatgtgggagtccacatatttcacagtatagaacag
attttttaaaaaaatatttgattggtcaccctttctattacaaacattca
attttgaattcaggaagctgaagaaatacttaatgactctcagcatgcac
aaatagatgactcttcctattatcgcttgagtatcatgaaaagggagtgt
taaatgcacatttattgattatagggttgtaaagacaaggaattggttat
cggaagtgttggtgttcttcccaagagacacgggagactcattattctaa
gagcctgtactaaatcttctctgaaggttagagatgaatgttgctttctg
ggactcagaatgaatcaagaaaaccttcagggatagagcaagaagctgtg
cttggtagcaaatgccactgtggagaacttcatcattgttaattaatatt
tcgtggaaactaaatgtcagtggcctgagccagattgacatcccagagtc
ttttattcattagagattaggtactttactctgtggccctctccgtgcca
agtgcccaggatccatgaacttccatcgtctccattcttggtcaacactg
ccaacaagtcgattagagaaaattagaatggtagctgtattctaatgcaa
acacctgctcctcacaaaggaccagagctaccaccaccacagcaaggagg
ccactggatcactgtgagtctaagtcttctgaatacctttgattcatcag
acatgaacttctttaataagtgtaatgggtgagagtaaataagactgaca
gcattgatttcttaaaagataagtaattcatacttgaagaagatgcaatt
atataatacctcaat

tctgcttagtaatgtgccttttttttttaattgggttatttggcttgttg
gccttcctgctcatatgtagcagatatgtagcttgaccttcttgtgggtc
ctgaacaactggagggggctatctcagaaactgttggctatctgtgggaa
atgctctacttgatgggctaccttgtctggccacagtggtagagtggaac
ctagccacgctaagagattgaaatacaagggtggggtgggtaggggatac
ttatgggatccccaactgctttgaagagaatgggagggggaaggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_71548326_71549448
seq2: B6Ng01-121P03.b_46_1160

seq1  GAATTCCAAATGAATTAATCATTAATTATGGTCAAACCCCATTGTTCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATGAATTAATCATTAATTATGGTCAAACCCCATTGTTCAGG  50

seq1  AATATGCTTAATGACAATTACGACAATAAATTTATTTATTTATTTTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCTTAATGACAATTACGACAATAAATTTATTTATTTATTTTTTTG  100

seq1  GTATTTGAAGAAATGTTGCAGATACATAGGCCTGACAAATGTATCAATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGAAGAAATGTTGCAGATACATAGGCCTGACAAATGTATCAATTG  150

seq1  TCTCTGCAAATAAAGTGTGGCAGTTTTCTCATTTGAATTTAATGCGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCAAATAAAGTGTGGCAGTTTTCTCATTTGAATTTAATGCGATTT  200

seq1  AATCATGCAAGAGGGATTTGGATCATAGTAGACTTCCCTGGGAATTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGCAAGAGGGATTTGGATCATAGTAGACTTCCCTGGGAATTATTT  250

seq1  TTGGTTATGGATATTATGTGGGAGTCCACATATTTCACAGTATAGAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTATGGATATTATGTGGGAGTCCACATATTTCACAGTATAGAACAG  300

seq1  ATTTTTTAAAAAAATATTTGATTGGTCACCCTTTCTATTACAAACATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAAAAAAATATTTGATTGGTCACCCTTTCTATTACAAACATTCA  350

seq1  ATTTTGAATTCAGGAAGCTGAAGAAATACTTAATGACTCTCAGCATGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAATTCAGGAAGCTGAAGAAATACTTAATGACTCTCAGCATGCAC  400

seq1  AAATAGATGACTCTTCCTATTATCGCTTGAGTATCATGAAAAGGGAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGATGACTCTTCCTATTATCGCTTGAGTATCATGAAAAGGGAGTGT  450

seq1  TAAATGCACATTTATTGATTATAGGGTTGTAAAGACAAGGAATTGGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCACATTTATTGATTATAGGGTTGTAAAGACAAGGAATTGGTTAT  500

seq1  CGGAAGTGTTGGTGTTCTTCCCAAGAGACACGGGAGACTCATTATTCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGTGTTGGTGTTCTTCCCAAGAGACACGGGAGACTCATTATTCTAA  550

seq1  GAGCCTGTACTAAATCTTCTCTGAAGGTTAGAGATGAATGTTGCTTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGTACTAAATCTTCTCTGAAGGTTAGAGATGAATGTTGCTTTCTG  600

seq1  GGACTCAGAATGAATCAAGAAAACCTTCAGGGATAGAGCAAGAAGCTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCAGAATGAATCAAGAAAACCTTCAGGGATAGAGCAAGAAGCTGTG  650

seq1  CTTGGTAGCAAATGCCACTGTGGAGAACTTCATCATTGTTAATTAATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAGCAAATGCCACTGTGGAGAACTTCATCATTGTTAATTAATATT  700

seq1  TCGTGGAAACTAAATGTCAGTGGCCTGAGCCAGATTGACATCCCAGAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGGAAACTAAATGTCAGTGGCCTGAGCCAGATTGACATCCCAGAGTC  750

seq1  TTTTATTCATTAGAGATTAGGTACTTTACTCTGTGGCCCTCTCCGTGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCATTAGAGATTAGGTACTTTACTCTGTGGCCCTCTCCGTGCCA  800

seq1  AGTGCCCAGGATCCATGAACTTCCATCGTCTCCATTCTTGGTCAACACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCCAGGATCCATGAACTTCCATCGTCTCCATTCTTGGTCAACACTG  850

seq1  CCAACAAGTCGATTAGAGAAAATTAGAATGGTAGCTGTATTCTAATGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAGTCGATTAGAGAAAATTAGAATGGTAGCTGTATTCTAATGCAA  900

seq1  ACACCTGCTCCTCACAAAGGACCAGAGCTACCACCACCACAGCAAGGAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGCTCCTCACAAAGGACCAGAGCTACCACCACCACAGCAAGGAGG  950

seq1  CCACTGGATCACTGTGAGTCTAAGTCTTCCTGAATACCTTTGATTCCATC  1000
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  CCACTGGATCACTGTGAGTCTAAGTCTT-CTGAATACCTTTGATT-CATC  998

seq1  AGACATGAACTTCTTTAATTAAGTGTAATGGGTGAAGAGTAAATAAGACT  1050
      |||||||||||||||||| ||||||||||||||| |||||||||||||||
seq2  AGACATGAACTTCTTTAA-TAAGTGTAATGGGTG-AGAGTAAATAAGACT  1046

seq1  GACAGCATTGATCTCTTAAAAAGGATAAGTAATTCATACTTGAAGAAGAT  1100
      |||||||||||| ||||||||  |||||||||||||||||||||||||||
seq2  GACAGCATTGATTTCTTAAAA--GATAAGTAATTCATACTTGAAGAAGAT  1094

seq1  GCAATTTATATAATACACTCAAT  1123
      |||| ||||||||||| ||||||
seq2  GCAA-TTATATAATAC-CTCAAT  1115


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