BAC Information

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BAC

Clone NameB6Ng01-122D10
Chromosome18 (Build37)
Map Location 71,768,428 - 71,856,360
singlet/doubletdoublet
Overlap geneDcc
Upstream geneMbd2, EG668032
Downstream geneLOC629684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122D10.bB6Ng01-122D10.g
ACCDH925699DH925700
length1,1411,112
definitionDH925699|Mus musculus domesticus DNA, BAC clone: B6Ng01-122D10, 5' end.DH925700|Mus musculus domesticus DNA, BAC clone: B6Ng01-122D10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,768,428 - 71,769,588)(71,855,225 - 71,856,360)
sequence
gaattcctcttttgattaacataaatggagctgaataaaaagcctagggg
aacttggatagatacagtacactctactgttttcccaggtgagatactaa
ctcattgggaacagtgcaggttagaaaagaagacatggtcattggccaac
acaaagcagttatgtcaccacggtttagttgagtcatccctatgcattag
gcacttcgggagtcagtctgtgaacagtaaatatgttttattgtaaattt
gtattttccgagggtgtgggtaactcagacatgcactcaagtcctcaaag
acacagaaatcatccacagatctgcgcccttgggcacattggtacactgt
gtagatcatataagtacatggggtattatgaacaatttattgaatgtttc
tgcagctgtccacctcatattagaaaatgaatattaagtgcttagtgtta
gagagttgtcacgaaaaaatacattaggcagaaagaaagagagctagaat
tattaaaagtcatatttctcaggttgaaattatggatacatttgcagtat
ttagtagcttgtcagagtggcagtcttactttgctgtaaacccacaggca
tatcgttagtgtcatctatgaaatattcactaattcagtggcaggattgt
aaattgtcctgattctagaaggtatagagccacctgttattttgaaaacc
tgaacaccatgtatttaggggatgatagaattaaggaagccagtatggta
taaatcaccgatgctaatttgctggcataaatgtagaatgatatattgta
caatcctggcaattatgtcagaaatcaggctacagtaattcattaacacc
atttcttcagcaaagtggaggggtctgacatctgtagcgaatattatgat
ctatgctgttatgaacagtacgcagccataagataatttgaaaagctaat
tattaaaatactcagtttacgattcagctactgttcaagaacgtggatca
ttttgcaaatacaggtctatttcctgatgagagaatgtaagtgacaagat
tatagagaggtgggttacctctcatagctgtcactggcaactgacaactg
actgagagtgttatggagctgagatttacctaaacaagtat
gaattctctcatcaattcctgatgatgttttgagtactagaggatttcag
gatgaaatgcaaagccaaagaatcagctagaagtggagtacaaagttgct
ctcttcagacacccgaagagggcatcagattccattacagagggttatga
gccaccatgtggccgctgggaattgaactcaggacctctagaacagtcag
tgcacttaaccactgagccatctttaaagcccaaagagtttttttttttt
tcctctattcccacagtgttgacgttttataggcaggtgaagagctaatc
cctaactgtaacagcaaaatggagatacatgttcactgtcctccttgatc
cctttaactgccttgggataggacagctctacatacgctctcctttgcca
atgctttattaccacttcctaaaacctgactctctcatactgtcccctcc
cacttccaaaaagcccttatgtcatacactagtatctgtgtgttttcaca
tatctatttgagcatatgtgaacacacacattgatatttctactaacaca
gtacatttaacttaatgggaaatcatcaatttcttattaatcaattgcat
ccattttttgcaagtggcatatcatatttcattcttttatgactaataca
gtagaatccttaataatcaataaaatgttacaacctaattttatatatat
tctacatattctggaattttatattttcaaaatttttattttattgtcaa
tctattagatttcaatttccatgctaatataccacactagaatatatgcc
ttatgaaatctaaattttgattcatattactactgtgaatcaccccacat
tataatttttactcctctatgatttaaatacattgtgcaaagatttttta
aatgtatttaatttcttgtgaataaaagccattatttttttaaaaaatga
tctctatttggtagatcttatacacttcatgatatacatctttttcagtt
ttgaaatttccatttaaaacagtgttatgcgttctgatctatttagtagg
attttaggttttctagaacaaattaaattaaaagccgaagtgactggggc
gatgttttatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_71768428_71769588
seq2: B6Ng01-122D10.b_47_1187

seq1  GAATTCCTCTTTTGATTAACATAAATGGAGCTGAATAAAAAGCCTAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTTTGATTAACATAAATGGAGCTGAATAAAAAGCCTAGGGG  50

seq1  AACTTGGATAGATACAGTACACTCTACTGTTTTCCCAGGTGAGATACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGATAGATACAGTACACTCTACTGTTTTCCCAGGTGAGATACTAA  100

seq1  CTCATTGGGAACAGTGCAGGTTAGAAAAGAAGACATGGTCATTGGCCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTGGGAACAGTGCAGGTTAGAAAAGAAGACATGGTCATTGGCCAAC  150

seq1  ACAAAGCAGTTATGTCACCACGGTTTAGTTGAGTCATCCCTATGCATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCAGTTATGTCACCACGGTTTAGTTGAGTCATCCCTATGCATTAG  200

seq1  GCACTTCGGGAGTCAGTCTGTGAACAGTAAATATGTTTTATTGTAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCGGGAGTCAGTCTGTGAACAGTAAATATGTTTTATTGTAAATTT  250

seq1  GTATTTTCCGAGGGTGTGGGTAACTCAGACATGCACTCAAGTCCTCAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCCGAGGGTGTGGGTAACTCAGACATGCACTCAAGTCCTCAAAG  300

seq1  ACACAGAAATCATCCACAGATCTGCGCCCTTGGGCACATTGGTACACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAATCATCCACAGATCTGCGCCCTTGGGCACATTGGTACACTGT  350

seq1  GTAGATCATATAAGTACATGGGGTATTATGAACAATTTATTGAATGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATCATATAAGTACATGGGGTATTATGAACAATTTATTGAATGTTTC  400

seq1  TGCAGCTGTCCACCTCATATTAGAAAATGAATATTAAGTGCTTAGTGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTGTCCACCTCATATTAGAAAATGAATATTAAGTGCTTAGTGTTA  450

seq1  GAGAGTTGTCACGAAAAAATACATTAGGCAGAAAGAAAGAGAGCTAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTGTCACGAAAAAATACATTAGGCAGAAAGAAAGAGAGCTAGAAT  500

seq1  TATTAAAAGTCATATTTCTCAGGTTGAAATTATGGATACATTTGCAGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAGTCATATTTCTCAGGTTGAAATTATGGATACATTTGCAGTAT  550

seq1  TTAGTAGCTTGTCAGAGTGGCAGTCTTACTTTGCTGTAAACCCACAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGCTTGTCAGAGTGGCAGTCTTACTTTGCTGTAAACCCACAGGCA  600

seq1  TATCGTTAGTGTCATCTATGAAATATTCACTAATTCAGTGGCAGGATTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGTTAGTGTCATCTATGAAATATTCACTAATTCAGTGGCAGGATTGT  650

seq1  AAATTGTCCTGATTCTAGAAGGTATAGAGCCACCTGTTATTTTGAAAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTCCTGATTCTAGAAGGTATAGAGCCACCTGTTATTTTGAAAACC  700

seq1  TGAACACCATGTATTTAGGGGATGATAGAATTAAGGAAGCCAGTATGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACCATGTATTTAGGGGATGATAGAATTAAGGAAGCCAGTATGGTA  750

seq1  TAAATCACCGATGCTAATTTGCTGGCATAAATGTAGAATGATATATTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCACCGATGCTAATTTGCTGGCATAAATGTAGAATGATATATTGTA  800

seq1  CAATCCTGGCAATTATGTCAGAAATCAGGCTACAGTAATTCATTAACACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTGGCAATTATGTCAGAAATCAGGCTACAGTAATTCATTAACACC  850

seq1  ATTTCTTCAGCAAAAGTGGAGGGGTCTGACATCTGTAGCGAATATTATGA  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCAGC-AAAGTGGAGGGGTCTGACATCTGTAGCGAATATTATGA  899

seq1  TCTATGCTGTTATGAACAGTACGCAGCCATAAGATAATTTGAAAAGCTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCTGTTATGAACAGTACGCAGCCATAAGATAATTTGAAAAGCTAA  949

seq1  TTATTAAAATACTCAGGTTTACGATTCAGCTACTGTTCAAGAACGTGGAT  1000
      ||||||||||||||| ||||||||||||||||||||||||||||||||| 
seq2  TTATTAAAATACTCA-GTTTACGATTCAGCTACTGTTCAAGAACGTGGA-  997

seq1  TCATTTTGCAAATTACAGGTCTTATTTTCCTGATGAAGAGGATGGAAAGT  1050
      |||||||||||| |||||||||   |||||||||| |||| || | ||||
seq2  TCATTTTGCAAA-TACAGGTCT--ATTTCCTGATG-AGAGAAT-GTAAGT  1042

seq1  GACAAGATTATAGAGAGGTGGGTTAACTCTTTCATAGCCTGGTCCACTGG  1100
      ||||||||||||||||||||||||| |||  |||||| |||   ||||||
seq2  GACAAGATTATAGAGAGGTGGGTTACCTC--TCATAG-CTG--TCACTGG  1087

seq1  GAACTGACAAACTGACTGAAGAGTTGTTATGAAGCTGAGATTTTACCTAA  1150
       ||||||| ||||||||| |||| ||||||| |||||||| |||||||||
seq2  CAACTGAC-AACTGACTG-AGAG-TGTTATGGAGCTGAGA-TTTACCTAA  1133

seq1  AAACCAAGTAT  1161
      |   |||||||
seq2  A---CAAGTAT  1141

seq1: chr18_71855225_71856360
seq2: B6Ng01-122D10.g_68_1179 (reverse)

seq1  TCATAAAAACATCGCCCCAGTCACTCTCTGCCTTTTTAATTTTTAATTTT  50
      |||| |||||||||||||||||||| || ||  ||||||  |||||||| 
seq2  TCAT-AAAACATCGCCCCAGTCACT-TCGGC--TTTTAA--TTTAATTT-  43

seq1  TGGTTTCTAGAAATCCTAAATATCTTACCTTAAATTAGATCAGATCGCAT  100
          ||||||||| |||||| ||| |||  |||| ||||||||| |||||
seq2  ---GTTCTAGAAAACCTAAA-ATCCTAC--TAAA-TAGATCAGAACGCAT  86

seq1  AACACTTGTTTTTAAAATGGAAATTTCAAAAACTGAAAAAAGAATGTATA  150
      ||||| ||||||  ||||||||||||| ||||||||||||   |||||||
seq2  AACAC-TGTTTT--AAATGGAAATTTC-AAAACTGAAAAA--GATGTATA  130

seq1  TCATGAAGTGTTATAAGATCTTACCAAATAGAAGATCCATTTTTTAAAAA  200
      |||||||||| ||||||||| |||||||||| |||| |||||||||||||
seq2  TCATGAAGTG-TATAAGATC-TACCAAATAG-AGAT-CATTTTTTAAAAA  176

seq1  AATAATGGCTTTTATTTCACAAGAAATTAAATTACATTTAAAAAATCTTT  250
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  AATAATGGCTTTTA-TTCACAAGAAATTAAA-TACATTTAAAAAATCTTT  224

seq1  GCACAATGTATTTAAATCATAGAGGAGTAAAAATTATAATGT-GTGTGAT  299
      |||||||||||||||||||||||||||||||||||||||||| | |||||
seq2  GCACAATGTATTTAAATCATAGAGGAGTAAAAATTATAATGTGGGGTGAT  274

seq1  TCACAGTAGTAATATGAATCAAAATTTAGATTTCATAAGGCATATATTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTAGTAATATGAATCAAAATTTAGATTTCATAAGGCATATATTCT  324

seq1  AGTGTGGTATATTAGCATGGAAATTGAAATCTAATAGATTGACAATAAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGTATATTAGCATGGAAATTGAAATCTAATAGATTGACAATAAAA  374

seq1  TAAAAATTTTGAAAATATAAAATTCCAGAATATGTAGAATATATATAAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTTTGAAAATATAAAATTCCAGAATATGTAGAATATATATAAAA  424

seq1  TTAGGTTGTAACATTTTATTGATTATTAAGGATTCTACTGTATTAGTCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTGTAACATTTTATTGATTATTAAGGATTCTACTGTATTAGTCAT  474

seq1  -AAAGAATGAAATATGATATGCCACTTGCAAAAAATGGATGCAATTGATT  548
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATGAAATATGATATGCCACTTGCAAAAAATGGATGCAATTGATT  524

seq1  AATAAGAAATTGATGATTTCCCATTAAGTTAAATGTACTGTGTTAGTAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAAATTGATGATTTCCCATTAAGTTAAATGTACTGTGTTAGTAGA  574

seq1  AATATCAATGTGTGTGTTCACATATGCTCAAATAGATATGTGAAAACACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAATGTGTGTGTTCACATATGCTCAAATAGATATGTGAAAACACA  624

seq1  CAGATACTAGTGTATGACATAAGGGCTTTTTGGAAGTGGGAGGGGACAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACTAGTGTATGACATAAGGGCTTTTTGGAAGTGGGAGGGGACAGT  674

seq1  ATGAGAGAGTCAGGTTTTAGGAAGTGGTAATAAAGCATTGGCAAAGGAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGAGTCAGGTTTTAGGAAGTGGTAATAAAGCATTGGCAAAGGAGA  724

seq1  GCGTATGTAGAGCTGTCCTATCCCAAGGCAGTTAAAGGGATCAAGGAGGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTATGTAGAGCTGTCCTATCCCAAGGCAGTTAAAGGGATCAAGGAGGA  774

seq1  CAGTGAACATGTATCTCCATTTTGCTGTTACAGTTAGGGATTAGCTCTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAACATGTATCTCCATTTTGCTGTTACAGTTAGGGATTAGCTCTTC  824

seq1  ACCTGCCTATAAAACGTCAACACTGTGGGAATAGAGGAAAAAAAAAAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCTATAAAACGTCAACACTGTGGGAATAGAGGAAAAAAAAAAAAA  874

seq1  CTCTTTGGGCTTTAAAGATGGCTCAGTGGTTAAGTGCACTGACTGTTCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGGGCTTTAAAGATGGCTCAGTGGTTAAGTGCACTGACTGTTCTA  924

seq1  GAGGTCCTGAGTTCAATTCCCAGCGGCCACATGGTGGCTCATAACCCTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCTGAGTTCAATTCCCAGCGGCCACATGGTGGCTCATAACCCTCT  974

seq1  GTAATGGAATCTGATGCCCTCTTCGGGTGTCTGAAGAGAGCAACTTTGTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGGAATCTGATGCCCTCTTCGGGTGTCTGAAGAGAGCAACTTTGTA  1024

seq1  CTCCACTTCTAGCTGATTCTTTGGCTTTGCATTTCATCCTGAAATCCTCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTTCTAGCTGATTCTTTGGCTTTGCATTTCATCCTGAAATCCTCT  1074

seq1  AGTACTCAAAACATCATCAGGAATTGATGAGAGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCAAAACATCATCAGGAATTGATGAGAGAATTC  1112