BAC Information

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BAC

Clone NameB6Ng01-122F22
Chromosome18 (Build37)
Map Location 9,815,357 - 9,995,236
singlet/doubletdoublet
Overlap geneColec12, LOC100039787, EG433161, Thoc1, Usp14
Upstream geneLOC665161, Fzd8, 9430022F06Rik, Ccny, LOC665176, LOC665184, EG639618, LOC100039755, Cetn1, LOC225155, LOC665111
Downstream geneRock1, LOC100039978, LOC635344, LOC435554, AK220484, LOC621832, Esco1, Snrpd1, LOC100039880, Abhd3, Mib1, LOC665296
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122F22.bB6Ng01-122F22.g
ACCDH925814DH925815
length9791,171
definitionDH925814|Mus musculus domesticus DNA, BAC clone: B6Ng01-122F22, 5' end.DH925815|Mus musculus domesticus DNA, BAC clone: B6Ng01-122F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,815,357 - 9,816,106)(9,994,068 - 9,995,236)
sequence
gaattctccatacatccatgaagcctgctccattctctactaaaggctat
cagaatgatttctgtcaatttggtgtaaggttctcaggggatgagtggaa
agaatgaatcagaaggaagaaatacagattcagagagtagggagactggg
ggtgcatagggagtaatgaaaggtgacaggagtcagggtaaaaaggttgg
aactaagtagatgacatcatactaaaagtgctgaaagcataaagcagtgg
agatttctttttccttttattgaaaatagatttttttcatacactatatc
ctgatatagttttccttccctcttctccccccagttcctctccatggcct
cacctctccagatccagtccctttctgtctctcattagaaaagagcctgt
ttctaagagataacaaccaaagatgacaaaataaaatacaataagataca
acaaaaaacattacattaaagttgggtttgaaactcaatatgaggaaaag
agtctcaatagcagacacaagaatcagagaccttcttgttcttatactca
ggaatcccttaaaattactaagctaaaaactataatatgttcatagagga
cctggtgcagacctcggtaggcccttgcttgctgcttcagtctatgagct
tgtgtgtgctttctttagataattcagaggccatgttctcctgctgttct
tctgctgtctccatctcctcttcacctcctcttttgtagagttccctgag
ctcttaggggacaaatttgatggagacatcccatttaaattctgtttcca
catagtgtctggatatgggtgtctgcacctgttcccaacttctgatgact
gaataaggcactgatctatgagtgtaccagaatatcattaaagggtcttt
tttttttttttgatagtttttttttggtttactctaggtctctggactat
ctagtctctcattcttgcatacccaagca
gaattctgtgatcagtttcattccctcacacgtttgttgtttctattttc
tttcccaaagtctttgtgcccatcttgaaagttactgatttttaagatta
aggtatacattaccaagagtattgtttattaatctattgactacccagtg
agtaagtccttagatgtttcaggaactttagcaatctaaggaaaggatga
agtgttgaatattcgtgatctggtctgatttgagttgactaggaatgtca
ggaatatcatgacatcttccacctcatgttttaatgctctgtaaagtacc
caagattcctataggataataaatctgtaatagtgtgggtaagtcagcat
tttaggtttgtaaatagtttgctaacttaaacattattagcagttaagac
gccttacaatggggagtgaaacatggaatgaaacagtgctgtgtgtactg
taatagtttgtgtcatgacccctgggattcagtgttatttgctagaacag
ttgtagaacgaaggaatttggcacctgtgttttcctactaaaccaggtga
ggtagatttagaacaaatatgccaaaactatgtttagaatgcattaagaa
aactattatacaaaaagtgtggtgatagtttatttgacctaaaaaggcat
tccaaaaataattctttaaagtagaaattggacttccatcattttgtttt
aaataaggtgttaagtgttttagaatgaggtaaaaaacatttctcctccc
tttcaatccctgaactgccttaatttgcttaatgcagaagacatctggag
gccagggttgtgctttagtcactgcttcccaagctagtagagtggcagtt
caagcaagaacacttaacagtggtctgcccagtcgcccttcactagtata
ctaaacacctacaggaaatgctgtatgggactagaaacacgaacatctta
accgtcagccagtacacacaatgctcttgctacatatagggtatttttca
catctccagtgaactggacaggatatccttgggtgttaagactaaggagg
tcaagtatctttgtaaagctaaagaagtagtggtcttgaattccactctc
atataactctgaagctaggcaacaaacatttttcgttttgacaaacacac
tatagatattggtttttgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_9815357_9816106
seq2: B6Ng01-122F22.b_45_794

seq1  GAATTCTCCATACATCCATGAAGCCTGCTCCATTCTCTACTAAAGGCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATACATCCATGAAGCCTGCTCCATTCTCTACTAAAGGCTAT  50

seq1  CAGAATGATTTCTGTCAATTTGGTGTAAGGTTCTCAGGGGATGAGTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGATTTCTGTCAATTTGGTGTAAGGTTCTCAGGGGATGAGTGGAA  100

seq1  AGAATGAATCAGAAGGAAGAAATACAGATTCAGAGAGTAGGGAGACTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAATCAGAAGGAAGAAATACAGATTCAGAGAGTAGGGAGACTGGG  150

seq1  GGTGCATAGGGAGTAATGAAAGGTGACAGGAGTCAGGGTAAAAAGGTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCATAGGGAGTAATGAAAGGTGACAGGAGTCAGGGTAAAAAGGTTGG  200

seq1  AACTAAGTAGATGACATCATACTAAAAGTGCTGAAAGCATAAAGCAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGTAGATGACATCATACTAAAAGTGCTGAAAGCATAAAGCAGTGG  250

seq1  AGATTTCTTTTTCCTTTTATTGAAAATAGATTTTTTTCATACACTATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTTTTTCCTTTTATTGAAAATAGATTTTTTTCATACACTATATC  300

seq1  CTGATATAGTTTTCCTTCCCTCTTCTCCCCCCAGTTCCTCTCCATGGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATAGTTTTCCTTCCCTCTTCTCCCCCCAGTTCCTCTCCATGGCCT  350

seq1  CACCTCTCCAGATCCAGTCCCTTTCTGTCTCTCATTAGAAAAGAGCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTCCAGATCCAGTCCCTTTCTGTCTCTCATTAGAAAAGAGCCTGT  400

seq1  TTCTAAGAGATAACAACCAAAGATGACAAAATAAAATACAATAAGATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGAGATAACAACCAAAGATGACAAAATAAAATACAATAAGATACA  450

seq1  ACAAAAAACATTACATTAAAGTTGGGTTTGAAACTCAATATGAGGAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAACATTACATTAAAGTTGGGTTTGAAACTCAATATGAGGAAAAG  500

seq1  AGTCTCAATAGCAGACACAAGAATCAGAGACCTTCTTGTTCTTATACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAATAGCAGACACAAGAATCAGAGACCTTCTTGTTCTTATACTCA  550

seq1  GGAATCCCTTAAAATTACTAAGCTAAAAACTATAATATGTTCATAGAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCCCTTAAAATTACTAAGCTAAAAACTATAATATGTTCATAGAGGA  600

seq1  CCTGGTGCAGACCTCGGTAGGCCCTTGCTTGCTGCTTCAGTCTATGAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGCAGACCTCGGTAGGCCCTTGCTTGCTGCTTCAGTCTATGAGCT  650

seq1  TGTGTGTGCTTTCTTTAGATAATTCAGAGGCCATGTTCTCCTGCTGTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCTTTCTTTAGATAATTCAGAGGCCATGTTCTCCTGCTGTTCT  700

seq1  TCTGCTGTCTCCATCTCCTCTTCACCTCCTCTTTTGTAGAGTTCCCTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGTCTCCATCTCCTCTTCACCTCCTCTTTTGTAGAGTTCCCTGAG  750

seq1: chr18_9994068_9995236
seq2: B6Ng01-122F22.g_67_1237 (reverse)

seq1  CTGCAAAAACCAA-ATCATTAG-CTGTTTGTCCAAAACAGAAAATGTTTG  48
      ||||||||||||| |||  |||  ||||||| ||||||  ||||||||||
seq2  CTGCAAAAACCAATATCTATAGTGTGTTTGT-CAAAACGAAAAATGTTTG  49

seq1  TTTGCTAGCTCTAAGTTTATATGA-AGTGGAGTCTAAGACCCAACTACTC  97
      ||  ||||||  |   |||||||| |||||| |  ||||||  |||||| 
seq2  TTGCCTAGCTTCAGAGTTATATGAGAGTGGAATTCAAGACC--ACTACTT  97

seq1  CTTTAGCTTTACAAAGATTACTTGACCTCCTTAAGTCTTTAAACACCCAG  147
      ||||||||||||||||| |||||||||||||| ||||||  |||||||| 
seq2  CTTTAGCTTTACAAAGA-TACTTGACCTCCTT-AGTCTT--AACACCCAA  143

seq1  GGAT-TCCTGT-CAGTTCACTTGAGATGTG-AAAATACCCTATATGTAGC  194
      |||| |||||| ||||||||| |||||||| |||||||||||||||||||
seq2  GGATATCCTGTCCAGTTCACTGGAGATGTGAAAAATACCCTATATGTAGC  193

seq1  -AGAGCATGTGTG-GTACTGGCTGACGGTTAAGATGTTCGTG-TTCTAGT  241
       ||||||| |||| |||||||||||||||||||||||||||| |||||||
seq2  AAGAGCAT-TGTGTGTACTGGCTGACGGTTAAGATGTTCGTGTTTCTAGT  242

seq1  CCCATACAGCATTTCCTGTGGGTGTTTAGTATACTAGTGAAGGGCGACTG  291
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCCATACAGCATTTCCTGTAGGTGTTTAGTATACTAGTGAAGGGCGACTG  292

seq1  GGCAGACCACTGTTAAGTGTTCTTGCTTGAACTG-CACTCTACTAGCTGG  340
      |||||||||||||||||||||||||||||||||| ||||||||||||| |
seq2  GGCAGACCACTGTTAAGTGTTCTTGCTTGAACTGCCACTCTACTAGCTTG  342

seq1  GGAAGCAGTGACT-AAGCACAACCCTGGCCTCCAGATGTCTTCTGCATTA  389
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGAAGCAGTGACTAAAGCACAACCCTGGCCTCCAGATGTCTTCTGCATTA  392

seq1  AGCAAATTAAGGCAAGTTCAGGGATTGAAAGGGAGGAGAATGTTTTTTTA  439
      ||||||||||||| ||||||||||||||||||||||||||   |||||||
seq2  AGCAAATTAAGGC-AGTTCAGGGATTGAAAGGGAGGAGAAATGTTTTTTA  441

seq1  CCTCATTCTAAAACACTTAACACCTTATTTAAAACAAAATGATGGAAGTC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTCTAAAACACTTAACACCTTATTTAAAACAAAATGATGGAAGTC  491

seq1  CAATTTCTACTTTAAAGAATTATTTTTGGAATGCCTTTTTAGGTCAAATA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCTACTTTAAAGAATTATTTTTGGAATGCCTTTTTAGGTCAAATA  541

seq1  AACTATCACCACACTTTTTGTATAATAGTTTTCTTAATGCATTCTAAACA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCACCACACTTTTTGTATAATAGTTTTCTTAATGCATTCTAAACA  591

seq1  TAGTTTTGGCATATTTGTTCTAAATCTACCTCACCTGGTTTAGTAGGAAA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTGGCATATTTGTTCTAAATCTACCTCACCTGGTTTAGTAGGAAA  641

seq1  ACACAGGTGCCAAATTCCTTCGTTCTACAACTGTTCTAGCAAATAACACT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTGCCAAATTCCTTCGTTCTACAACTGTTCTAGCAAATAACACT  691

seq1  GAATCCCAGGGGTCATGACACAAACTATTACAGTACACACAGCACTGTTT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCCAGGGGTCATGACACAAACTATTACAGTACACACAGCACTGTTT  741

seq1  CATTCCATGTTTCACTCCCCATTGTAAGGCGTCTTAACTGCTAATAATGT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCATGTTTCACTCCCCATTGTAAGGCGTCTTAACTGCTAATAATGT  791

seq1  TTAAGTTAGCAAACTATTTACAAACCTAAAATGCTGACTTACCCACACTA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTAGCAAACTATTTACAAACCTAAAATGCTGACTTACCCACACTA  841

seq1  TTACAGATTTATTATCCTATAGGAATCTTGGGTACTTTACAGAGCATTAA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGATTTATTATCCTATAGGAATCTTGGGTACTTTACAGAGCATTAA  891

seq1  AACATGAGGTGGAAGATGTCATGATATTCCTGACATTCCTAGTCAACTCA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAGGTGGAAGATGTCATGATATTCCTGACATTCCTAGTCAACTCA  941

seq1  AATCAGACCAGATCACGAATATTCAACACTTCATCCTTTCCTTAGATTGC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGACCAGATCACGAATATTCAACACTTCATCCTTTCCTTAGATTGC  991

seq1  TAAAGTTCCTGAAACATCTAAGGACTTACTCACTGGGTAGTCAATAGATT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTCCTGAAACATCTAAGGACTTACTCACTGGGTAGTCAATAGATT  1041

seq1  AATAAACAATACTCTTGGTAATGTATACCTTAATCTTAAAAATCAGTAAC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACAATACTCTTGGTAATGTATACCTTAATCTTAAAAATCAGTAAC  1091

seq1  TTTCAAGATGGGCACAAAGACTTTGGGAAAGAAAATAGAAACAACAAACG  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGATGGGCACAAAGACTTTGGGAAAGAAAATAGAAACAACAAACG  1141

seq1  TGTGAGGGAATGAAACTGATCACAGAATTC  1169
      ||||||||||||||||||||||||||||||
seq2  TGTGAGGGAATGAAACTGATCACAGAATTC  1171