BAC Information

Click to search

BAC

Clone NameB6Ng01-122P07
Chromosome18 (Build37)
Map Location 18,818,862 - 18,916,866
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040647
Downstream geneLOC100040658, LOC665624, LOC665629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122P07.bB6Ng01-122P07.g
ACCDH926252DH926253
length1,212834
definitionDH926252|Mus musculus domesticus DNA, BAC clone: B6Ng01-122P07, 5' end.DH926253|Mus musculus domesticus DNA, BAC clone: B6Ng01-122P07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,915,643 - 18,916,866)(18,818,862 - 18,819,700)
sequence
gaattccagagtaagtgatgtgggatggatagacaaagatgacctcaagc
aatgacagagctcaattttcttcttcagtgtcaaggtaagagatatgatc
tggaatgagtgagaaggagagaagagaaaatatgtgccactgtattcaca
gtgacttaaagcaaaacttgactttcggtttgaatagaggaacctattat
attatatatggtttcttaatgataattctaaatggatattttatttttta
agaactaaggaaatataggaaaaagaaaacaaaacattatatgtctttgt
tggcacaacttatattttgactccaggttctaccttctttttgtacacaa
ttgcttctgctcattaggaaatgattgtttaaaaccttttagatataaac
taattaaatctcccactatttagagccatcactcattcttagaagtctag
taattctttgagaaatgtaaagggctcttgagtcttggaacttaatctta
ctacaaaaatactttaagtaaaaaatttcatttttctaggagaaaaatct
cagatgtatcccacagttcattggcagacacacacacacacacatccaag
agcagaaaatgaagggacaagtagttagtttcctgaggccaactggtttg
tgttacaaggattatcgatctgagcattttggattactttcatgtgtgat
catacagtaaggaacaaaggataagaagctgtctgtaggcaaagggggaa
agattcttgaactagtagtacgcttctgttccatgttgaagtcaccaggc
cgtggttcttcaggacttgcttgtttctttgtataaaatgaaccaaattc
agcaatctatgtagattttctatgtttcaattatatcaatttaaggtaaa
atctcatttctagacaagctcaagttatcacactacatatttatgaaata
actactcccaactttgatatgtaatttagaagttgtgaggttttagacat
ttctttgtttagattatatattttctaaattgtatctcaaattgttgttt
ttagttattattcaactactacagcataatccatgactctactgacaaaa
caacagagttatgagagttaggcaaataatatgtagtacccaaacagcta
tattacccctattcctgcttatgggcctattactgaattgtacactttca
gaaagtccaaaa
gaattcattgagctggaaataaaatataatgaaattaattagaaactact
caggttatttgtataatgtttaaataattttgatcctataaaaacattgt
cttgcacacatggactcacatcagctgtaaatgcatagagaagccatgcc
taagattctgttaacaaaagtctcagcaatgaagaagatagttatgagtt
aacacgtctagctcaggtaacactgtagctttctttctccagtgaataat
cccataccatacctataaaagcagcactttgtgagtgtgaaaaagagagc
acacatgaagtttggaggaaaaagtacatgtggaaaaaagaaattggtgg
tgtgggaaaggagatgaatctgatcaacatattatatgtatatttgcata
tcttttaactcagattcctctgtaatattagtgataatcaagagtaagta
ttcacatggatctcagttactttttaatcaatgtgaggaaacattgtgaa
caaggcaatttataaaagacagtgcttacttggatttacagtttcaaggt
ttagagcccatgagtgtgaagcacaagcaaggaaaaagacaccacaataa
tatggcccacagaatcaacaaagcatgattcatagaggttcacataattt
gaagtgataatcagagagcccttatgggtctaagttatgtgatctgcata
tatgttatggtgtgtagctaggtattcttgatcttctgaagatcttaaca
gtaggagtagaagctcttctctattccttttctgcctctgggaacctttc
cacctactgggtaatcttgttcagcctatatgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_18915643_18916866
seq2: B6Ng01-122P07.b_48_1259 (reverse)

seq1  TTTTTGACTTTCTTGAAACAAAGTACAAATCAGTAATAGGCCCCATAACC  50
      |||| ||||||| ||||  |  |||||| ||||||||||| ||||||| |
seq2  TTTTGGACTTTC-TGAA--AGTGTACAATTCAGTAATAGG-CCCATAAGC  46

seq1  AGAGATGGTGGTTATATAGCTG-TTGTGTACCTACATTATTATTTTGCTT  99
      ||  || | ||| ||||||||| ||| ||| ||||| ||||| ||||| |
seq2  AGGAATAGGGGTAATATAGCTGTTTGGGTA-CTACA-TATTA-TTTGCCT  93

seq1  AACTCTTCATTACTCTGTTGTTTTTGTCAAGTAGAGTCATGGA-TATGCT  148
      ||||| |||| ||||||||| ||||||| |||||||||||||| ||||||
seq2  AACTC-TCATAACTCTGTTG-TTTTGTC-AGTAGAGTCATGGATTATGCT  140

seq1  GTAGTAGTTGAAATAATAAACTAAAAAACAACAATTTGAGATAACAATTT  198
      |||||||||| |||||| |||| ||||||||||||||||||| |||||||
seq2  GTAGTAGTTG-AATAAT-AACT-AAAAACAACAATTTGAGAT-ACAATTT  186

seq1  AG-AAATATATAATCTAAACAAAGAAATGTCTAAAAACCTCACAACTTCT  247
      || ||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGAAAATATATAATCTAAACAAAGAAATGTCT-AAAACCTCACAACTTCT  235

seq1  AAATTACATATTCAAAGTTGGGAGTAGTTATTTCATAAATATGTAGTGTG  297
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAATTACATA-TCAAAGTTGGGAGTAGTTATTTCATAAATATGTAGTGTG  284

seq1  ATAACTTGAGCTTGTCTAG-AATGAGATTTTACCTTAAATTGATATAATT  346
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATAACTTGAGCTTGTCTAGAAATGAGATTTTACCTTAAATTGATATAATT  334

seq1  GAAACATAGAAAATCTACATAGATTGCTGAATTTGGTTCATTTTATACAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATAGAAAATCTACATAGATTGCTGAATTTGGTTCATTTTATACAA  384

seq1  AGAAACAAGCAAGTCCTGAAGAACCACGGCCTGGTGACTTCAACATGGAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAAGCAAGTCCTGAAGAACCACGGCCTGGTGACTTCAACATGGAA  434

seq1  CAGAAGCGTACTACTAGTTCAAGAATCTTTCCCCCTTTGCCTACAGACAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCGTACTACTAGTTCAAGAATCTTTCCCCCTTTGCCTACAGACAG  484

seq1  CTTCTTATCCTTTGTTCCTTACTGTATGATCACACATGAAAGTAATCCAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTATCCTTTGTTCCTTACTGTATGATCACACATGAAAGTAATCCAA  534

seq1  AATGCTCAGATCGATAATCCTTGTAACACAAACCAGTTGGCCTCAGGAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCAGATCGATAATCCTTGTAACACAAACCAGTTGGCCTCAGGAAA  584

seq1  CTAACTACTTGTCCCTTCATTTTCTGCTCTTGGATGTGTGTGTGTGTGTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTACTTGTCCCTTCATTTTCTGCTCTTGGATGTGTGTGTGTGTGTG  634

seq1  TCTGCCAATGAACTGTGGGATACATCTGAGATTTTTCTCCTAGAAAAATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAATGAACTGTGGGATACATCTGAGATTTTTCTCCTAGAAAAATG  684

seq1  AAATTTTTTACTTAAAGTATTTTTGTAGTAAGATTAAGTTCCAAGACTCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTTACTTAAAGTATTTTTGTAGTAAGATTAAGTTCCAAGACTCA  734

seq1  AGAGCCCTTTACATTTCTCAAAGAATTACTAGACTTCTAAGAATGAGTGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCTTTACATTTCTCAAAGAATTACTAGACTTCTAAGAATGAGTGA  784

seq1  TGGCTCTAAATAGTGGGAGATTTAATTAGTTTATATCTAAAAGGTTTTAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTAAATAGTGGGAGATTTAATTAGTTTATATCTAAAAGGTTTTAA  834

seq1  ACAATCATTTCCTAATGAGCAGAAGCAATTGTGTACAAAAAGAAGGTAGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCATTTCCTAATGAGCAGAAGCAATTGTGTACAAAAAGAAGGTAGA  884

seq1  ACCTGGAGTCAAAATATAAGTTGTGCCAACAAAGACATATAATGTTTTGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAGTCAAAATATAAGTTGTGCCAACAAAGACATATAATGTTTTGT  934

seq1  TTTCTTTTTCCTATATTTCCTTAGTTCTTAAAAAATAAAATATCCATTTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTCCTATATTTCCTTAGTTCTTAAAAAATAAAATATCCATTTA  984

seq1  GAATTATCATTAAGAAACCATATATAATATAATAGGTTCCTCTATTCAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATCATTAAGAAACCATATATAATATAATAGGTTCCTCTATTCAAA  1034

seq1  CCGAAAGTCAAGTTTTGCTTTAAGTCACTGTGAATACAGTGGCACATATT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAAGTCAAGTTTTGCTTTAAGTCACTGTGAATACAGTGGCACATATT  1084

seq1  TTCTCTTCTCTCCTTCTCACTCATTCCAGATCATATCTCTTACCTTGACA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCTCTCCTTCTCACTCATTCCAGATCATATCTCTTACCTTGACA  1134

seq1  CTGAAGAAGAAAATTGAGCTCTGTCATTGCTTGAGGTCATCTTTGTCTAT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAAGAAAATTGAGCTCTGTCATTGCTTGAGGTCATCTTTGTCTAT  1184

seq1  CCATCCCACATCACTTACTCTGGAATTC  1224
      ||||||||||||||||||||||||||||
seq2  CCATCCCACATCACTTACTCTGGAATTC  1212

seq1: chr18_18818862_18819700
seq2: B6Ng01-122P07.g_68_901

seq1  GAATTCATTGAGCTGGAAATAAAATATAATGAAATTAATTAGAAACTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAGCTGGAAATAAAATATAATGAAATTAATTAGAAACTACT  50

seq1  CAGGTTATTTGTATAATGTTTAAATAATTTTGATCCTATAAAAACATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTATTTGTATAATGTTTAAATAATTTTGATCCTATAAAAACATTGT  100

seq1  CTTGCACACATGGACTCACATCAGCTGTAAATGCATAGAGAAGCCATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCACACATGGACTCACATCAGCTGTAAATGCATAGAGAAGCCATGCC  150

seq1  TAAGATTCTGTTAACAAAAGTCTCAGCAATGAAGAAGATAGTTATGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTCTGTTAACAAAAGTCTCAGCAATGAAGAAGATAGTTATGAGTT  200

seq1  AACACGTCTAGCTCAGGTAACACTGTAGCTTTCTTTCTCCAGTGAATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACGTCTAGCTCAGGTAACACTGTAGCTTTCTTTCTCCAGTGAATAAT  250

seq1  CCCATACCATACCTATAAAAGCAGCACTTTGTGAGTGTGAAAAAGAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACCATACCTATAAAAGCAGCACTTTGTGAGTGTGAAAAAGAGAGC  300

seq1  ACACATGAAGTTTGGAGGAAAAAGTACATGTGGAAAAAAGAAATTGGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGAAGTTTGGAGGAAAAAGTACATGTGGAAAAAAGAAATTGGTGG  350

seq1  TGTGGGAAAGGAGATGAATCTGATCAACATATTATATGTATATTTGCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAAAGGAGATGAATCTGATCAACATATTATATGTATATTTGCATA  400

seq1  TCTTTTAACTCAGATTCCTCTGTAATATTAGTGATAATCAAGAGTAAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAACTCAGATTCCTCTGTAATATTAGTGATAATCAAGAGTAAGTA  450

seq1  TTCACATGGATCTCAGTTACTTTTTAATCAATGTGAGGAAACATTGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATGGATCTCAGTTACTTTTTAATCAATGTGAGGAAACATTGTGAA  500

seq1  CAAGGCAATTTATAAAAGACAGTGCTTACTTGGATTTACAGTTTCAAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAATTTATAAAAGACAGTGCTTACTTGGATTTACAGTTTCAAGGT  550

seq1  TTAGAGCCCATGAGTGTGAAGCACAAGCAAGGAAAAAGACACCACAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGCCCATGAGTGTGAAGCACAAGCAAGGAAAAAGACACCACAATAA  600

seq1  TATGGCCCACAGAATCAACAAAGCATGATTCATAGAGGTTCACATAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCCCACAGAATCAACAAAGCATGATTCATAGAGGTTCACATAATTT  650

seq1  GAAGTGATAATCAGAGAGCCCTTATGGGTCTAAGTTATGTGATCTGCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGATAATCAGAGAGCCCTTATGGGTCTAAGTTATGTGATCTGCATA  700

seq1  TATGTTATGGTTGTGTAGCTAGGTATTCTTGATCTTCTGAGATTCTTAAC  750
      |||||||||| |||||||||||||||||||||||||||||   |||||||
seq2  TATGTTATGG-TGTGTAGCTAGGTATTCTTGATCTTCTGAAGATCTTAAC  749

seq1  AGTAGGAGTAGAAGCTC-TCTCTAATTCCTTTTTCTGCTCTTGGGAACCT  799
      ||||||||||||||||| ||||| ||||| ||||||||   |||||||| 
seq2  AGTAGGAGTAGAAGCTCTTCTCT-ATTCC-TTTTCTGCCTCTGGGAACC-  796

seq1  TTTCCACCTACTGGGTAATCTTGTCCAGCCTTAATATGAG  839
      |||||||||||||||||||||||| ||||||  |||||||
seq2  TTTCCACCTACTGGGTAATCTTGTTCAGCCT--ATATGAG  834