BAC Information

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BAC

Clone NameB6Ng01-124B10
Chromosome18 (Build37)
Map Location 70,856,811 - 71,032,855
singlet/doubletdoublet
Overlap genenone
Upstream geneCcdc68, Rab27b, 2310002L13Rik, 4930503L19Rik, Stard6, Poli, Mbd2, EG668032
Downstream geneDcc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124B10.bB6Ng01-124B10.g
ACCDH927085DH927086
length1,2111,049
definitionDH927085|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B10, 5' end.DH927086|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,031,623 - 71,032,855)(70,856,811 - 70,857,855)
sequence
gaattccaaggactcacagtctcccactgcagaaagaaaacccctgagaa
agaaacaaagtcgactagaagaccatatggtaaaaatagtttacatccaa
tgagctgactagtgataaggaacagatctaaagaacccaagaagagcccc
cataagtgtgtttgatgaaagatgaggggccatgcaggcgagagggtatg
tagggctgggaaagagacagcagaggctggaacagatagaagagaaggca
aggttagatctctccccctttcccattcctccttccccatctaccacggt
catctatttcttcaatcaacctgtccataaggcacctcagttgaaggaga
gtctggaccttcttaaccttcgggaagacaaagaacaagaggaagtgcct
cagctgtcctgatgttaaggtcagcactgtaagagcgattactgagtgaa
cgccttgttctaagtttaaagagacacacgtctgggaatctgatggattg
gcatgttctaaacctccacagggacctttgagtataaaatgtaggaggaa
cagtagggagagaagcctgactctctctgctatgattattgttttcctat
agctataagatttttttggctcttcaaatatggctcagaatgtaggcaga
gtgtgtaaactagtcaaatctggaactgtggttggcaggagaatgattta
aaagagctctctaaaatgtaacatacattcatatttcagcctatagtaga
atttatcatcaactcagccctcagtctgacaacagaaaggaggtttttgt
tttgttttgttttgttttttaaatccacctctgtgaccaaaacacagcaa
tatttaccgcacttaggagcagaatactaagtagagaatagaacagttgt
acaaacagcatgaaattatcccctggaggagagttctgtatgactgcaat
gagcttcgctgcttaattcagatacaaaacagacagaagaccccgggtca
gccttcagttgctcatggaatggagtgatgtgcttctaaagataactgtc
cgtcccaagatcaggctttgccctgggacaatgggttgaaacgggtagtt
cttgtctattttcctgtgcccaagcaggaactttgaattagggaggctga
ccttaaagcgttgacaggaaggatagataatgtgagccacacaaacgacc
tgtgcctatct
gaattcactgtttagttctgtgctccatttttttctaaaactaggttatt
tgagttgttgatgttcaacttcttgagttttttatacattttggatatta
gtcctctgtgagatgtaggtgagtgaagatcctttcagcctgctttctta
tagagcctagggccaccaacccagtggcgtcctctcccacagagggctgg
gtctgctcttttcgttcagtaattaagaaaatgtccgaccagtttgtctg
atcaagccttatggaggcatttttctcaactgagattccctcctctcaga
tgactctaacttgtgtcaagttgatgtaaaactagcctgggtatggacag
tctgtgcagttaagcagtgcctcactccttgccatgcactgtcagcacat
gtagttcatagggctggcatctgagtgggctctaaagaccagtgcttttg
ggttggaaactaataaagtagttcaaattggaaattacctaatatatcca
ccatacccacacagcattctccattgtggtttcgataaactttaagcttt
tttttttttttaaaccttccagatataccagggcttattaatcagtctgt
cactccatagatgttgtactgggaaaccaatatcatatttgcctttttag
aagtactgtgagctttcttgttagaagtcatacaagtcaaagctcttggg
acttccttctcattccacctcctgactttgttgctaggcagacttgagtg
atccaacacaaccccaggaatgccattacagggtgtagaaggaacaaatc
atgagacaggaaactgaaatgtgccagtggccagagtgatttacaacttc
tttgactgtatgactactgtcttcatctaaccacgtgctcagtcttgcca
gtccttctgtttcagaaggtcagatttctctgcactgaatggtgattttt
actcttggtaataaatgtatcttagttaggacaagattgtaatagactgt
gctcgcaaaccagcatggctccgaccgtcccacctttcggtgtttctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_71031623_71032855
seq2: B6Ng01-124B10.b_47_1257 (reverse)

seq1  AGATAGGCACAGACTGCTATTGTTTGGCTCACATTATTCCTATCTTCTCA  50
      ||||||||||||    |  |||| |||||||||||||  ||||| | || 
seq2  AGATAGGCACAG--GTCGTTTGTGTGGCTCACATTAT--CTATCCT-TCC  45

seq1  TGTCAAACGCTTTATAAAGCTTCAGCTTACCTGACTCCTAAGTTCCCTGC  100
      |||| ||||||||   |||  ||||| | ||| | | | ||||| |||||
seq2  TGTC-AACGCTTT---AAG-GTCAGCCTCCCT-AATTCAAAGTT-CCTGC  88

seq1  TTTGGCACAGGGAAAATAGACAAGGAACTACCCAGTTTCAACCCATTGTA  150
      || |||||| ||||||||||||| ||||||||| ||||||||||||||| 
seq2  TTGGGCACA-GGAAAATAGACAA-GAACTACCC-GTTTCAACCCATTGT-  134

seq1  CACCAGGGCAAAGGCTGATCTTGGTGACTGACAGGTATACTTTAGAAGCA  200
        ||||||||||| |||||||||| ||| ||||| ||| |||||||||||
seq2  -CCCAGGGCAAAGCCTGATCTTGG-GACGGACAGTTAT-CTTTAGAAGCA  181

seq1  CATCACTCCATTCCAATGAGCAACTGAAGGCTGACCCGGGGTTCTTCTGT  250
      |||||||||||||| |||||||||||||||||||||||||| ||||||||
seq2  CATCACTCCATTCC-ATGAGCAACTGAAGGCTGACCCGGGG-TCTTCTGT  229

seq1  CTGTTTTGTATCTGAATTAAGCAGCGAAGCTCATTGCAGTCATACAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTGTATCTGAATTAAGCAGCGAAGCTCATTGCAGTCATACAGAAC  279

seq1  TCTCCTCCAGGGGATAATTTCATGCTGTTTGTACAACTGTTCTATTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCAGGGGATAATTTCATGCTGTTTGTACAACTGTTCTATTCTCT  329

seq1  ACTTAGTATTCTGCTCCTAAGTGCGGTAAATATTGCTGTGTTTTGGTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTATTCTGCTCCTAAGTGCGGTAAATATTGCTGTGTTTTGGTCAC  379

seq1  AGAGGTGGATTTAAAAAAACAAAACAAAACAAAACAAAAACCTCCTTTCT  450
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGGATTT-AAAAAACAAAACAAAACAAAACAAAAACCTCCTTTCT  428

seq1  GTTGTCAGACTGAGGGCTGAGTTGATGATAAATTCTACTATAGGCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCAGACTGAGGGCTGAGTTGATGATAAATTCTACTATAGGCTGAAA  478

seq1  TATGAATGTATGTTACATTTTAGAGAGCTCTTTTAAATCATTCTCCTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATGTATGTTACATTTTAGAGAGCTCTTTTAAATCATTCTCCTGCC  528

seq1  AACCACAGTTCCAGATTTGACTAGTTTACACACTCTGCCTACATTCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAGTTCCAGATTTGACTAGTTTACACACTCTGCCTACATTCTGAG  578

seq1  CCATATTTGAAGAGCCAAAAAAATCTTATAGCTATAGGAAAACAATAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTTGAAGAGCCAAAAAAATCTTATAGCTATAGGAAAACAATAATC  628

seq1  ATAGCAGAGAGAGTCAGGCTTCTCTCCCTACTGTTCCTCCTACATTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGAGAGAGTCAGGCTTCTCTCCCTACTGTTCCTCCTACATTTTAT  678

seq1  ACTCAAAGGTCCCTGTGGAGGTTTAGAACATGCCAATCCATCAGATTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAGGTCCCTGTGGAGGTTTAGAACATGCCAATCCATCAGATTCCC  728

seq1  AGACGTGTGTCTCTTTAAACTTAGAACAAGGCGTTCACTCAGTAATCGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTGTGTCTCTTTAAACTTAGAACAAGGCGTTCACTCAGTAATCGCT  778

seq1  CTTACAGTGCTGACCTTAACATCAGGACAGCTGAGGCACTTCCTCTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGTGCTGACCTTAACATCAGGACAGCTGAGGCACTTCCTCTTGTT  828

seq1  CTTTGTCTTCCCGAAGGTTAAGAAGGTCCAGACTCTCCTTCAACTGAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTTCCCGAAGGTTAAGAAGGTCCAGACTCTCCTTCAACTGAGGT  878

seq1  GCCTTATGGACAGGTTGATTGAAGAAATAGATGACCGTGGTAGATGGGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTATGGACAGGTTGATTGAAGAAATAGATGACCGTGGTAGATGGGGA  928

seq1  AGGAGGAATGGGAAAGGGGGAGAGATCTAACCTTGCCTTCTCTTCTATCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAATGGGAAAGGGGGAGAGATCTAACCTTGCCTTCTCTTCTATCT  978

seq1  GTTCCAGCCTCTGCTGTCTCTTTCCCAGCCCTACATACCCTCTCGCCTGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGCCTCTGCTGTCTCTTTCCCAGCCCTACATACCCTCTCGCCTGC  1028

seq1  ATGGCCCCTCATCTTTCATCAAACACACTTATGGGGGCTCTTCTTGGGTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCCCTCATCTTTCATCAAACACACTTATGGGGGCTCTTCTTGGGTT  1078

seq1  CTTTAGATCTGTTCCTTATCACTAGTCAGCTCATTGGATGTAAACTATTT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGATCTGTTCCTTATCACTAGTCAGCTCATTGGATGTAAACTATTT  1128

seq1  TTACCATATGGTCTTCTAGTCGACTTTGTTTCTTTCTCAGGGGTTTTCTT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATATGGTCTTCTAGTCGACTTTGTTTCTTTCTCAGGGGTTTTCTT  1178

seq1  TCTGCAGTGGGAGACTGTGAGTCCTTGGAATTC  1233
      |||||||||||||||||||||||||||||||||
seq2  TCTGCAGTGGGAGACTGTGAGTCCTTGGAATTC  1211

seq1: chr18_70856811_70857855
seq2: B6Ng01-124B10.g_69_1117

seq1  GAATTCACTGTTTAGTTCTGTGCTCCATTTTTTTCTAAAACTAGGTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTTTAGTTCTGTGCTCCATTTTTTTCTAAAACTAGGTTATT  50

seq1  TGAGTTGTTGATGTTCAACTTCTTGAGTTTTTTATACATTTTGGATATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGTTGATGTTCAACTTCTTGAGTTTTTTATACATTTTGGATATTA  100

seq1  GTCCTCTGTGAGATGTAGGTGAGTGAAGATCCTTTCAGCCTGCTTTCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTGTGAGATGTAGGTGAGTGAAGATCCTTTCAGCCTGCTTTCTTA  150

seq1  TAGAGCCTAGGGCCACCAACCCAGTGGCGTCCTCTCCCACAGAGGGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCCTAGGGCCACCAACCCAGTGGCGTCCTCTCCCACAGAGGGCTGG  200

seq1  GTCTGCTCTTTTCGTTCAGTAATTAAGAAAATGTCCGACCAGTTTGTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTCTTTTCGTTCAGTAATTAAGAAAATGTCCGACCAGTTTGTCTG  250

seq1  ATCAAGCCTTATGGAGGCATTTTTCTCAACTGAGATTCCCTCCTCTCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCCTTATGGAGGCATTTTTCTCAACTGAGATTCCCTCCTCTCAGA  300

seq1  TGACTCTAACTTGTGTCAAGTTGATGTAAAACTAGCCTGGGTATGGACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTAACTTGTGTCAAGTTGATGTAAAACTAGCCTGGGTATGGACAG  350

seq1  TCTGTGCAGTTAAGCAGTGCCTCACTCCTTGCCATGCACTGTCAGCACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCAGTTAAGCAGTGCCTCACTCCTTGCCATGCACTGTCAGCACAT  400

seq1  GTAGTTCATAGGGCTGGCATCTGAGTGGGCTCTAAAGACCAGTGCTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCATAGGGCTGGCATCTGAGTGGGCTCTAAAGACCAGTGCTTTTG  450

seq1  GGTTGGAAACTAATAAAGTAGTTCAAATTGGAAATTACCTAATATATCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGAAACTAATAAAGTAGTTCAAATTGGAAATTACCTAATATATCCA  500

seq1  CCATACCCACACAGCATTCTCCATTGTGGTTTCGATAAACTTTAAGCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACCCACACAGCATTCTCCATTGTGGTTTCGATAAACTTTAAGCTTT  550

seq1  TTTTTTTTTTTAAACCTTCCAGATATACCAGGGCTTATTAATCAGTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTAAACCTTCCAGATATACCAGGGCTTATTAATCAGTCTGT  600

seq1  CACTCCATAGATGTTGTACTGGGAAACCAATATCATATTTGCCTTTTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCATAGATGTTGTACTGGGAAACCAATATCATATTTGCCTTTTTAG  650

seq1  AAGTACTGTGAGCTTTCTTGTTAGAAGTCATACAAGTCAAAGCTCTTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTGTGAGCTTTCTTGTTAGAAGTCATACAAGTCAAAGCTCTTGGG  700

seq1  ACTTCCTTCTCATTCCACCTCCTGACTTTGTTGCTAGGCAGACTTGAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTTCTCATTCCACCTCCTGACTTTGTTGCTAGGCAGACTTGAGTG  750

seq1  ATCCAACACAACCCCAGGAATGCCATTACAGGGTGTAGAAGGAACAAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAACACAACCCCAGGAATGCCATTACAGGGTGTAGAAGGAACAAATC  800

seq1  ATGAGACAGGAAACTGAAATGTGCCAGTGGCCAGAGTGATTTACAACTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACAGGAAACTGAAATGTGCCAGTGGCCAGAGTGATTTACAACTTC  850

seq1  -TTGACTGTATGACTACTGTCTTCATCTAACCACGTGCTCAGTCTTGCCA  899
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTGTATGACTACTGTCTTCATCTAACCACGTGCTCAGTCTTGCCA  900

seq1  GTCCTTCTGTTTCAG-AGGTCAGATTTCTCTGCACTGAATGGTGATTTAT  948
      ||||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  GTCCTTCTGTTTCAGAAGGTCAGATTTCTCTGCACTGAATGGTGATTT-T  949

seq1  TACTCTTGGTAATAAATGTACTGTAGTAAGGAACAGAATGTAATGGACTG  998
      ||||||||||||||||||||   |||| ||||  ||| |||||| |||||
seq2  TACTCTTGGTAATAAATGTATCTTAGTTAGGACAAGATTGTAATAGACTG  999

seq1  TGCTGGCAGA-CAGCATGGCTCCGACTGTCCCA-CTTTCGGT-TTTCTGG  1045
      |||| ||| | ||||||||||||||| |||||| |||||||| |||||||
seq2  TGCTCGCAAACCAGCATGGCTCCGACCGTCCCACCTTTCGGTGTTTCTGG  1049