BAC Information

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BAC

Clone NameB6Ng01-124B11
Chromosome18 (Build37)
Map Location 63,057,749 - 63,203,163
singlet/doubletdoublet
Overlap geneApcdd1, Napg, 9430028L06Rik, 9030411M15Rik
Upstream geneAblim3, Sh3tc2, Adrb2, Htr4, Fbxo38, Spink10, EG408198, 2700046A07Rik
Downstream geneLOC627792, Txnl1, Wdr7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124B11.bB6Ng01-124B11.g
ACCDH927087DH927088
length1,047963
definitionDH927087|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B11, 5' end.DH927088|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,202,117 - 63,203,163)(63,057,749 - 63,058,713)
sequence
gaattcagtgggaaagatgctaataccaataagaaagagacagcagaaga
gagaaagaggaggagatccacattaaagaagaggcgttttttaaagcatg
tgcttgttatgttcagccagaatctactggcttctgtcatcctcagtggt
cctgcgcagctaaatcccttgtgcaggactgggaatggaccacatcttgg
tcaaaagcctctgggactatcaggcatggcttctcctttccatatgctct
ccgatgtaaggagtgacggcggtaggtatgctgtgctacatgtctgctga
cttggaaatgaaccgagagctcatggctgtgactattgatcctgttttta
aaacactcctgtgcatagactgggttgctccttctcgaggcgagagtcac
ttgctcaggtttggaaggaggcaatgctcactgtccacttttgcatctgg
gaaggctactgcttgcagtgtctgcagaccgggagagaatttctggaagg
aacaaagcagatgggatccacagaggagggtttttatttttttcttttct
cacatgcttgaggcttctgacttgggagttctgaggtggtgtcgtaagaa
ttgggacaggttccaagcctgtatacatgctaagacaagtgtgtttctgc
ccatcttctttcctaacagcgagcccacacagtgtaccatgctgtattcg
cgccaaggaactacggaaaccatcgaggaggtggaggctgaagctgagga
ggaggtggtagaaggtctggagcctgagctccatgatgcagaagaaaagg
aatacgcagctgaatatgaagcaggggtagaggagatcagcctcactcca
gatgaggaattgcctcagttctcttacagatgactgtgatgtggaggcgc
cgcccttcttacagcaaggctgtcagctttgagcatctatcgtttgcgtc
gcaagatgactctgggccagaaccatttgatggtcagtcctgatgacagc
tgtacagacaagctggagtcaagcatctttccacctctgactcatga
gaattcagttcccagaatgccttcttacagatgccttgaacaggacatga
cccatataacaagacctgacttcttttgttggatagaaccgtcctccaag
tccacagccccattcctcaccctgggctcagatccattggctgataaaca
actccacctatgcccagaatttttggctgaggaaacctcaatccacttgc
acagggcccttcaacataaatacagagataaagtccttgaaagttattag
ggtgattatctgtgccaaatttacatttataaatagaacaatgaggattg
tgagttaaacttgaactaaaactagatttttaagatttgtaagtttaatc
ggtgaagtattcattcatttgaagccaattatcccataaataaccttttc
agcatataaaatcattgacccagcctttaataaaaagaattctataaaac
cgtggggggaaggaggagttgtaaataaacacattgaagtaaattgcaga
gcaagggagttaagctgagcatcaaagggaaaccattacagaatgaaaac
gaaggttaggaacaccaagaacaaaacagagcaagcagtcaacccctaac
ctaaaagtctggctccaaagaatccggttaaatgtaaagagaacacgatg
cctatttaaagagtgtagtgaaaagaaaaaaaggcaacaggataaattct
gaaaatatccaaagtcacaacaggaaagaaaatgtctcctgagatgtaga
gagagggggacttccagttcatgattcccagaaaacagagacaaaaaaaa
tggtgactcttgagatgtttgcgtatgttattcaccttcaagggaaagct
tcaagaagtcttcaatatcacacaaagaagttcatgggctctggctagct
agcctcaacttgtgcataaaatattcagtggaacaaagcaacgtgtgtgt
gtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_63202117_63203163
seq2: B6Ng01-124B11.b_46_1092 (reverse)

seq1  TCATGAGTCAGAGGTGGTAAGATGCTTGACTCCAGCTTGTCTGTACGGCT  50
      ||||||||||||||||| |||||||||||||||||||||||||||| |||
seq2  TCATGAGTCAGAGGTGGAAAGATGCTTGACTCCAGCTTGTCTGTACAGCT  50

seq1  GTCATCAGGACTGACCACCATGTGGTTCTTGGCCCCAGAGTCATCTTGCG  100
      ||||||||||||||||| ||  |||||||  | |||||||||||||||||
seq2  GTCATCAGGACTGACCATCAAATGGTTCT--GGCCCAGAGTCATCTTGCG  98

seq1  ACGCAAACGATAGATGCTCAAAGCTGACAGCCTTGCTGTAAG-AGGGCGG  149
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACGCAAACGATAGATGCTCAAAGCTGACAGCCTTGCTGTAAGAAGGGCGG  148

seq1  CGCCTCCACATCACAGTCATCTGT-AGAGAACTGAGGCAATTCCTCATCT  198
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CGCCTCCACATCACAGTCATCTGTAAGAGAACTGAGGCAATTCCTCATCT  198

seq1  GGAGTGAGGCTGATCTCCTCTACCCCTGCTTCATATTCAGCTGCGTATTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGAGGCTGATCTCCTCTACCCCTGCTTCATATTCAGCTGCGTATTC  248

seq1  CTTTTCTTCTGCATCATGGAGCTCAGGCTCCAGACCTTCTACCACCTCCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTCTGCATCATGGAGCTCAGGCTCCAGACCTTCTACCACCTCCT  298

seq1  CCTCAGCTTCAGCCTCCACCTCCTCGATGGTTTCCGTAGTTCCTTGGCGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCTTCAGCCTCCACCTCCTCGATGGTTTCCGTAGTTCCTTGGCGC  348

seq1  GAATACAGCATGGTACACTGTGTGGGCTCGCTGTTAGGAAAGAAGATGGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACAGCATGGTACACTGTGTGGGCTCGCTGTTAGGAAAGAAGATGGG  398

seq1  CAGAAACACACTTGTCTTAGCATGTATACAGGCTTGGAACCTGTCCCAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACACACTTGTCTTAGCATGTATACAGGCTTGGAACCTGTCCCAAT  448

seq1  TCTTACGACACCACCTCAGAACTCCCAAGTCAGAAGCCTCAAGCATGTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACGACACCACCTCAGAACTCCCAAGTCAGAAGCCTCAAGCATGTGA  498

seq1  GAAAAGAAAAAAATAAAAACCCTCCTCTGTGGATCCCATCTGCTTTGTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAAAAATAAAAACCCTCCTCTGTGGATCCCATCTGCTTTGTTC  548

seq1  CTTCCAGAAATTCTCTCCCGGTCTGCAGACACTGCAAGCAGTAGCCTTCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGAAATTCTCTCCCGGTCTGCAGACACTGCAAGCAGTAGCCTTCC  598

seq1  CAGATGCAAAAGTGGACAGTGAGCATTGCCTCCTTCCAAACCTGAGCAAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCAAAAGTGGACAGTGAGCATTGCCTCCTTCCAAACCTGAGCAAG  648

seq1  TGACTCTCGCCTCGAGAAGGAGCAACCCAGTCTATGCACAGGAGTGTTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTCGCCTCGAGAAGGAGCAACCCAGTCTATGCACAGGAGTGTTTT  698

seq1  AAAAACAGGATCAATAGTCACAGCCATGAGCTCTCGGTTCATTTCCAAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGGATCAATAGTCACAGCCATGAGCTCTCGGTTCATTTCCAAGT  748

seq1  CAGCAGACATGTAGCACAGCATACCTACCGCCGTCACTCCTTACATCGGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGACATGTAGCACAGCATACCTACCGCCGTCACTCCTTACATCGGA  798

seq1  GAGCATATGGAAAGGAGAAGCCATGCCTGATAGTCCCAGAGGCTTTTGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATATGGAAAGGAGAAGCCATGCCTGATAGTCCCAGAGGCTTTTGAC  848

seq1  CAAGATGTGGTCCATTCCCAGTCCTGCACAAGGGATTTAGCTGCGCAGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGTGGTCCATTCCCAGTCCTGCACAAGGGATTTAGCTGCGCAGGA  898

seq1  CCACTGAGGATGACAGAAGCCAGTAGATTCTGGCTGAACATAACAAGCAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAGGATGACAGAAGCCAGTAGATTCTGGCTGAACATAACAAGCAC  948

seq1  ATGCTTTAAAAAACGCCTCTTCTTTAATGTGGATCTCCTCCTCTTTCTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTAAAAAACGCCTCTTCTTTAATGTGGATCTCCTCCTCTTTCTCT  998

seq1  CTTCTGCTGTCTCTTTCTTATTGGTATTAGCATCTTTCCCACTGAATTC  1047
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCTGTCTCTTTCTTATTGGTATTAGCATCTTTCCCACTGAATTC  1047

seq1: chr18_63057749_63058713
seq2: B6Ng01-124B11.g_68_1030

seq1  GAATTCAGTTCCCAGAATGCCTTCTTACAGATGCCTTGAACAGGACATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCCAGAATGCCTTCTTACAGATGCCTTGAACAGGACATGA  50

seq1  CCCATATAACAAGACCTGACTTCTTTTGTTGGATAGAACCGTCCTCCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATAACAAGACCTGACTTCTTTTGTTGGATAGAACCGTCCTCCAAG  100

seq1  TCCACAGCCCCATTCCTCACCCTGGGCTCAGATCCATTGGCTGATAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGCCCCATTCCTCACCCTGGGCTCAGATCCATTGGCTGATAAACA  150

seq1  ACTCCACCTATGCCCAGAATTTTTGGCTGAGGAAACCTCAATCCACTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACCTATGCCCAGAATTTTTGGCTGAGGAAACCTCAATCCACTTGC  200

seq1  ACAGGGCCCTTCAACATAAATACAGAGATAAAGTCCTTGAAAGTTATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCCCTTCAACATAAATACAGAGATAAAGTCCTTGAAAGTTATTAG  250

seq1  GGTGATTATCTGTGCCAAATTTACATTTATAAATAGAACAATGAGGATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTATCTGTGCCAAATTTACATTTATAAATAGAACAATGAGGATTG  300

seq1  TGAGTTAAACTTGAACTAAAACTAGATTTTTAAGATTTGTAAGTTTAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTAAACTTGAACTAAAACTAGATTTTTAAGATTTGTAAGTTTAATC  350

seq1  GGTGAAGTATTCATTCATTTGAAGCCAATTATCCCATAAATAACCTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGTATTCATTCATTTGAAGCCAATTATCCCATAAATAACCTTTTC  400

seq1  AGCATATAAAATCATTGACCCAGCCTTTAATAAAAAGAATTCTATAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATAAAATCATTGACCCAGCCTTTAATAAAAAGAATTCTATAAAAC  450

seq1  CGTGGGGGGAAGGAGGAGTTGTAAATAAACACATTGAAGTAAATTGCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGGGGAAGGAGGAGTTGTAAATAAACACATTGAAGTAAATTGCAGA  500

seq1  GCAAGGGAGTTAAGCTGAGCATCAAAGGGAAACCATTACAGAATGAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGAGTTAAGCTGAGCATCAAAGGGAAACCATTACAGAATGAAAAC  550

seq1  GAAGGTTAGGAACACCAAGAACAAAACAGAGCAAGCAGTCAACCCCTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTAGGAACACCAAGAACAAAACAGAGCAAGCAGTCAACCCCTAAC  600

seq1  CTAAAAGTCTGGCTCCAAAGAATCCGGTTAAATGTAAAGAGAACACGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGTCTGGCTCCAAAGAATCCGGTTAAATGTAAAGAGAACACGATG  650

seq1  CCTA-TTAAAGAGTGTAGTGAAAAG-AAAAAAGGCAACAGGATAAATTCT  698
      |||| |||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCTATTTAAAGAGTGTAGTGAAAAGAAAAAAAGGCAACAGGATAAATTCT  700

seq1  GAAAATATCCAAAGTCACAACAGGAAAGAAAATGTCTCCTGAGATGTAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATCCAAAGTCACAACAGGAAAGAAAATGTCTCCTGAGATGTAGA  750

seq1  GAGAGGGGGACTTCCAGTTCATGATTCCCAGAAAACAGAGACAAAAAAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGGGACTTCCAGTTCATGATTCCCAGAAAACAGAGACAAAAAAAA  800

seq1  TGGTGACTCTTGAGATGTTTGCGTATTGTTATTCACCTTCAAGGGAAAGC  848
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGGTGACTCTTGAGATGTTTGCGTA-TGTTATTCACCTTCAAGGGAAAGC  849

seq1  TTCAAGAAGTCTTCAATATCAACACAAAGAAGTTCATGGGCTCTGGCTAG  898
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTCAAGAAGTCTTCAATATC-ACACAAAGAAGTTCATGGGCTCTGGCTAG  898

seq1  CTAGCCTCAAACTTGTGCATAAAAATATTCAGTGGAGCAAAGCAACGTGT  948
      |||||||| ||||||||||| ||||||||||||||| |||||||||||||
seq2  CTAGCCTC-AACTTGTGCAT-AAAATATTCAGTGGAACAAAGCAACGTGT  946

seq1  GTGTGTGTGTGTGTGTG  965
      |||||||||||||||||
seq2  GTGTGTGTGTGTGTGTG  963