BAC Information

Click to search

BAC

Clone NameB6Ng01-124B24
Chromosome18 (Build37)
Map Location 69,136,068 - 69,284,148
singlet/doubletdoublet
Overlap genenone
Upstream geneD18Ertd653e, 4933403F05Rik, Rnmt, Mc5r, Mc2r
Downstream geneLOC100043380, EG225681, Tcf4, Ccdc68, Rab27b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124B24.bB6Ng01-124B24.g
ACCDH927113DH927114
length4021,109
definitionDH927113|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B24, 5' end.DH927114|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,283,747 - 69,284,148)(69,136,068 - 69,137,148)
sequence
gaattcagtttgtttctttggggaaagccattcggagggtagacagacca
taacatccacacatgaatccatgcccactggacttgaagcttgtgttttt
acatatttcggtttatcgtggttgtgaagctctcaggaacggagaatgct
gtagagaagaacaatatccccgaattaatgatgcaatgcccgtcattcgc
tatgaggcagtttgcaagccctaggatatgtcctgtgccacgggcgttat
tgttttcaatgaaatgtgttccacgtacaagcactttcatatacatatgc
tgtgtggaaagagacacatacttacttatgcacaggatctaaatagcacc
acacatacacactttttttttgttcaactctgtgtgcatgtgtgtttgtg
tg
gaattccaagacacccctcaaagcccggacttatgtcaacaagagttttc
tagcggagcagaggtttatctgggaatctggctgccagcattcattccct
gatctgcctgctccatccaacaacatagacctgactttcttgccagcagc
cagccgagcagggcagccaagactaacaagtgtaggcactgtgcagggta
cagggcatatgaatagcgctattctttgctggccaacactggccccattg
tttcaggcaatgaatagagctgtgtggaaaaaaaaatcacacacaaagta
aaagctgcaaaatttgtctctttgtgatggtttcaagactgggtgaaaaa
gccgttctttccctggtgctgttttacattttctttcacaaatagaaagc
acgctctggcaaggacagaagctttttcagtcagagctcaaaagttacag
gtcacagtgcaggtgggagagctcggagtcaacctcgaggcttagcattc
ggattcatcaagacacggagggatgaagtgacgcgggcgttgagctgaga
ggctgtgctttctgcggtcatctttacccatttgacacgggggttttgtt
ttgctgacccagataacagaggaagtttaagcacctctgcttaattacta
cataggatcaggtactctcaaagcagacaacttgccaatccctagctgtc
ttcagttggggctgggctttggggtgcatcgctgaacccctgttaaagcg
caaccagggcgtttaccattgtattgtgcatacttttaatttgagtcaga
gggtcccccacagctactgatgaattttaactttctctgagttgtaaaac
aaattccttcggcaatgaaaattgctgtaattcatggctgaaggaagccc
ttacatgtcatcctcctcattgtccaagccctctaaaagaaagaacttta
agtcgggatggtaggtgcctttcgacataaatttatactaacctagaagt
ggcagactgaattattttttcctgtgcatcttgtgctggtacagtttgga
tactcaattttctcccacaagtgaatctcttatttttgtttttaaaaaga
gaacattcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_69283747_69284148
seq2: B6Ng01-124B24.b_44_445 (reverse)

seq1  CACACAAACACACATGCACACAGAGTTGAACAAAAAAAAAGTGTGTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAACACACATGCACACAGAGTTGAACAAAAAAAAAGTGTGTATGT  50

seq1  GTGGTGCTATTTAGATCCTGTGCATAAGTAAGTATGTGTCTCTTTCCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCTATTTAGATCCTGTGCATAAGTAAGTATGTGTCTCTTTCCACA  100

seq1  CAGCATATGTATATGAAAGTGCTTGTACGTGGAACACATTTCATTGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATATGTATATGAAAGTGCTTGTACGTGGAACACATTTCATTGAAAA  150

seq1  CAATAACGCCCGTGGCACAGGACATATCCTAGGGCTTGCAAACTGCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACGCCCGTGGCACAGGACATATCCTAGGGCTTGCAAACTGCCTCA  200

seq1  TAGCGAATGACGGGCATTGCATCATTAATTCGGGGATATTGTTCTTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGAATGACGGGCATTGCATCATTAATTCGGGGATATTGTTCTTCTCT  250

seq1  ACAGCATTCTCCGTTCCTGAGAGCTTCACAACCACGATAAACCGAAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATTCTCCGTTCCTGAGAGCTTCACAACCACGATAAACCGAAATAT  300

seq1  GTAAAAACACAAGCTTCAAGTCCAGTGGGCATGGATTCATGTGTGGATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAACACAAGCTTCAAGTCCAGTGGGCATGGATTCATGTGTGGATGT  350

seq1  TATGGTCTGTCTACCCTCCGAATGGCTTTCCCCAAAGAAACAAACTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCTGTCTACCCTCCGAATGGCTTTCCCCAAAGAAACAAACTGAAT  400

seq1  TC  402
      ||
seq2  TC  402

seq1: chr18_69136068_69137148
seq2: B6Ng01-124B24.g_70_1178

seq1  GAATTCCAAGACACCCCTCAAAGCCCGGACTTATGTCAACAAGAGTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGACACCCCTCAAAGCCCGGACTTATGTCAACAAGAGTTTTC  50

seq1  TAGCGGAGCAGAGGTTTATCTGGGAATCTGGCTGCCAGCATTCATTCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGGAGCAGAGGTTTATCTGGGAATCTGGCTGCCAGCATTCATTCCCT  100

seq1  GATCTGCCTGCTCCATCCAACAACATAGACCTGACTTTCTTGCCAGCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCCTGCTCCATCCAACAACATAGACCTGACTTTCTTGCCAGCAGC  150

seq1  CAGCCGAGCAGGGCAGCCAAGACTAACAAGTGTAGGCACTGTGCAGGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGAGCAGGGCAGCCAAGACTAACAAGTGTAGGCACTGTGCAGGGTA  200

seq1  CAGGGCATATGAATAGCGCTATTCTTTGCTGGCCAACACTGGCCCCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCATATGAATAGCGCTATTCTTTGCTGGCCAACACTGGCCCCATTG  250

seq1  TTTCAGGCAATGAATAGAGCTGTGTGGAAAAAAAAATCACACACAAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGCAATGAATAGAGCTGTGTGGAAAAAAAAATCACACACAAAGTA  300

seq1  AAAGCTGCAAAATTTGTCTCTTTGTGATGGTTTCAAGACTGGGTGAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGCAAAATTTGTCTCTTTGTGATGGTTTCAAGACTGGGTGAAAAA  350

seq1  GCCGTTCTTTCCCTGGTGCTGTTTTACATTTTCTTTCACAAATAGAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTTCTTTCCCTGGTGCTGTTTTACATTTTCTTTCACAAATAGAAAGC  400

seq1  ACGCTCTGGCAAGGACAGAAGCTTTTTCAGTCAGAGCTCAAAAGTTACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTCTGGCAAGGACAGAAGCTTTTTCAGTCAGAGCTCAAAAGTTACAG  450

seq1  GTCACAGTGCAGGTGGGAGAGCTCGGAGTCAACCTCGAGGCTTAGCATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGTGCAGGTGGGAGAGCTCGGAGTCAACCTCGAGGCTTAGCATTC  500

seq1  GGATTCATCAAGACACGGAGGGATGAAGTGACGCGGGCGTTGAGCTGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCATCAAGACACGGAGGGATGAAGTGACGCGGGCGTTGAGCTGAGA  550

seq1  GGCTGTGC-TTCTGCGGTCATCTTTACCCATTTGACACGGGGGTTTTG-T  598
      |||||||| ||||||||||||||||||||||||||||||||||||||| |
seq2  GGCTGTGCTTTCTGCGGTCATCTTTACCCATTTGACACGGGGGTTTTGTT  600

seq1  TTGCTGACCCAGATAACAGAGGAAG-TTAAGCACCTCTGCTTAATTACTA  647
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTGCTGACCCAGATAACAGAGGAAGTTTAAGCACCTCTGCTTAATTACTA  650

seq1  CATAGGATCAGGTACTCTCAAAGCAGACAAC-TGCCAATTCCTAGCTGTC  696
      ||||||||||||||||||||||||||||||| ||||||| ||||||||||
seq2  CATAGGATCAGGTACTCTCAAAGCAGACAACTTGCCAATCCCTAGCTGTC  700

seq1  TTCAGTTGGGGCTGGGC-TTGGGGTGCATCGCTGAACCCCTG-TAAAGCG  744
      ||||||||||||||||| |||||||||||||||||||||||| |||||||
seq2  TTCAGTTGGGGCTGGGCTTTGGGGTGCATCGCTGAACCCCTGTTAAAGCG  750

seq1  CAACCAGGGCGTTTACCATTGTATTGTGCATACTTTTAATTGAAGTCAGA  794
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  CAACCAGGGCGTTTACCATTGTATTGTGCATACTTTTAATTTGAGTCAGA  800

seq1  GG--TCCACACAGCTACTGATGAA-TTTAAC-TTCTCTGAG-TGTAAAAC  839
      ||   || |||||||||||||||| |||||| ||||||||| ||||||||
seq2  GGGTCCCCCACAGCTACTGATGAATTTTAACTTTCTCTGAGTTGTAAAAC  850

seq1  AAATTCC-TCGGCAATGAAAA-TGCTGTAA-TCAT-GCTGAATGAAGCCC  885
      ||||||| ||||||||||||| |||||||| |||| |||||| |||||||
seq2  AAATTCCTTCGGCAATGAAAATTGCTGTAATTCATGGCTGAAGGAAGCCC  900

seq1  TTACATGTCAT-CTTCTCATTGTCCA--GCCACTTAGAGAAAGGACTTT-  931
      ||||||||||| || |||||||||||   || || | |||||| ||||| 
seq2  TTACATGTCATCCTCCTCATTGTCCAAGCCCTCTAAAAGAAAGAACTTTA  950

seq1  AGTCGGTA-GGTAGGTGCCTTTCGACATAAA-TTATACTAA-CTAG-AGT  977
      |||||| | |||||||||||||||||||||| ||||||||| |||| |||
seq2  AGTCGGGATGGTAGGTGCCTTTCGACATAAATTTATACTAACCTAGAAGT  1000

seq1  -GCAGACTGAATTATTTTT--CTGTGCATCTTGGTGCT-GTACAGTTTGT  1023
       ||||||||||||||||||  ||||||||||| ||||| |||||||||| 
seq2  GGCAGACTGAATTATTTTTTCCTGTGCATCTT-GTGCTGGTACAGTTTGG  1049

seq1  A-AATCTAATTTCT-CCACAA-TGAATCTCCTTATTTTTGTTTTTTAAAA  1070
      | | || | ||||| |||||| ||||||| ||||||||||||||| ||||
seq2  ATACTCAATTTTCTCCCACAAGTGAATCT-CTTATTTTTGTTTTTAAAAA  1098

seq1  GAGAACATTCC  1081
      |||||||||||
seq2  GAGAACATTCC  1109