BAC Information

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BAC

Clone NameB6Ng01-124F07
Chromosome18 (Build37)
Map Location 15,681,695 - 15,885,103
singlet/doubletdoublet
Overlap geneChst9
Upstream geneEG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1, EG622268, LOC100040151, Aqp4, LOC665473
Downstream geneLOC670012, LOC100040551, EG225228, LOC100040202, Ppia-ps18_172.1, EG665509, Cdh2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124F07.bB6Ng01-124F07.g
ACCDH927266DH927267
length9381,041
definitionDH927266|Mus musculus domesticus DNA, BAC clone: B6Ng01-124F07, 5' end.DH927267|Mus musculus domesticus DNA, BAC clone: B6Ng01-124F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,681,695 - 15,682,406)(15,884,057 - 15,885,103)
sequence
gaattctagtttgaaaagaagagtgcattttacaaacttagaaaccataa
gttcaagcttaagaaaatggaatcagaactgagaccatggtagaatcaat
acaagcttcacatttcctaaagtgatgaacctcagtcaagactagagact
aaatttgaatctgtattatttattttattccactgcttacttttttctgt
tatgtcattattcattttttattggatattttctttttttttaaattttt
tattaggtatttagctcatttacatttccaatgctataccaaaagtcccc
catacccacccacccggactcccctacccacccactccccctttttggcc
ctggcgttcccctgtactggggcatataaattttgcgtgtccaatgggcc
tctctttccagtgatggccgactaggccatcttttgatacatatgcagct
agagtcaagagctccggggtactggttagttcataatgttgttccaccta
tagggttgcagatccctttagctccttgggtactttctctagctcctcct
ttgggagccctgtgatccatccattagcaggctgtgagcatccacttctg
tgtttgctaggccccggcatagtctcacaagagacagctacatctgggtc
ctttcaataaaatcttgctagtgtatgcaatggtgtcagcgtttggatgc
tgattatggggtggatccctggatatggcagtctctacatggtccatcct
ttcatctcagctccaaactttgtttctgtaactcccttccagggtgtttt
gttcccacttctaaggaggggcatagtgtccacactcagtcttcattttt
cttgagtttctttatttacatttaaatgtaccctttcccagcttccttcc
ctcccagaaacaccctatcacatcctccttccccagct
gaattctttattatcacggagatagtgtgttcaccagcctctgagaatac
agcatggacttctttgggtaatatttgcagccttccaaaagtaacactct
taacttccctatgttgataatgatgttgtgcatatgtaagatgttatcat
tgcaggaagctgggaacaggacacatatgattctactattttcataactt
ctaattattttaaaataacatttgtgaagggagaaagcatttggtgaaaa
tgtagaaatgcttacagaatttgagttaggaaaatgggctgaaatggtat
tattcagcctgtaaggttgttaataaagtaataaataataagttagtaaa
tgggatagagtatcacgaagtggcacacatgattagcatgcagaaaagag
tatgtggattcaaacccgagcatacacacaaaaggttgcttttaaatagt
caattaagcctactgtgttatcacacaaactacagccagtctcatccgaa
atgtgcattaaaatcttgttctcacttaattaaaacctactcattcaaga
tttactggctttggtggttaacacactctacaaggttctaaattcaatga
acaggattttaatttccatccctttaattataaccctgtccacaatgtac
cagatattattagaaacataccacagcttaccctcaatatggctaaaagg
agaaataggcttccacagtgtttgcttgtgttttttagcacactttactg
tgcttaccaaatgaaaaaccttaagccagattactaaaatgttttagagt
aagcctcatgatggttgtatacttttcagaaacaccatccattctatatg
acttagtatttcctaatgctttgtgatacgtagcataattgctgttgtcc
tgatttattagagagagtaaattaactgaacatgacatgggtgtttctga
tgaaaagaggaagtggggcttatattactcctctcatctagtcccaaact
caactatgtataatggaatttccagggagagagctgagagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_15681695_15682406
seq2: B6Ng01-124F07.b_44_755

seq1  GAATTCTAGTTTGAAAAGAAGAGTGCATTTTACAAACTTAGAAACCATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTTTGAAAAGAAGAGTGCATTTTACAAACTTAGAAACCATAA  50

seq1  GTTCAAGCTTAAGAAAATGGAATCAGAACTGAGACCATGGTAGAATCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGCTTAAGAAAATGGAATCAGAACTGAGACCATGGTAGAATCAAT  100

seq1  ACAAGCTTCACATTTCCTAAAGTGATGAACCTCAGTCAAGACTAGAGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTTCACATTTCCTAAAGTGATGAACCTCAGTCAAGACTAGAGACT  150

seq1  AAATTTGAATCTGTATTATTTATTTTATTCCACTGCTTACTTTTTTCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGAATCTGTATTATTTATTTTATTCCACTGCTTACTTTTTTCTGT  200

seq1  TATGTCATTATTCATTTTTTATTGGATATTTTCTTTTTTTTTAAATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCATTATTCATTTTTTATTGGATATTTTCTTTTTTTTTAAATTTTT  250

seq1  TATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCC  300

seq1  CATACCCACCCACCCGGACTCCCCTACCCACCCACTCCCCCTTTTTGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCCACCCACCCGGACTCCCCTACCCACCCACTCCCCCTTTTTGGCC  350

seq1  CTGGCGTTCCCCTGTACTGGGGCATATAAATTTTGCGTGTCCAATGGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGTTCCCCTGTACTGGGGCATATAAATTTTGCGTGTCCAATGGGCC  400

seq1  TCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCT  450

seq1  AGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTA  500

seq1  TAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCT  550

seq1  TTGGGAGCCCTGTGATCCATCCATTAGCAGGCTGTGAGCATCCACTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGCCCTGTGATCCATCCATTAGCAGGCTGTGAGCATCCACTTCTG  600

seq1  TGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTC  650

seq1  CTTTCAATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGC  700

seq1  TGATTATGGGGT  712
      ||||||||||||
seq2  TGATTATGGGGT  712

seq1: chr18_15884057_15885103
seq2: B6Ng01-124F07.g_69_1109 (reverse)

seq1  ACTCTCATGCTCTCTCCCTTGAAAATTCCACTTAT-CATTGTTGAGTTTG  49
      ||||||| |||||||||| || |||||||| |||| ||| ||||||||| 
seq2  ACTCTCA-GCTCTCTCCC-TGGAAATTCCA-TTATACATAGTTGAGTTT-  46

seq1  GGGACTAGATGAGGAGAGTAAATATAAGCACACATCCCTCTTTTCATCAG  99
      |||||||||||||  |||| ||||||||| |   | ||||||||||||||
seq2  GGGACTAGATGAGAGGAGT-AATATAAGCCCCACTTCCTCTTTTCATCAG  95

seq1  AAACACCCATGTCATTGTTCAGCTTAATTTACTCTCTCTAATAAAATCAG  149
      |||||||||||||| ||||||| ||||||||||||||||||| |||||||
seq2  AAACACCCATGTCA-TGTTCAG-TTAATTTACTCTCTCTAAT-AAATCAG  142

seq1  GACAACAGCATTTATGCTACGTATCACAAAGCATTAGGAAATACTAAGTC  199
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GACAACAGCAATTATGCTACGTATCACAAAGCATTAGGAAATACTAAGTC  192

seq1  ATATAGAATGGATGGTGTTTCTGAAAAGTATACAACCATCATGAGGCTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAATGGATGGTGTTTCTGAAAAGTATACAACCATCATGAGGCTTA  242

seq1  CTCTAAAACATTTTAGTAATCTGGCTTAAGGTTTTTCATTTGGTAAGCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAACATTTTAGTAATCTGGCTTAAGGTTTTTCATTTGGTAAGCAC  292

seq1  AGT-AAGTGTGCTAAAAAACACAAGCAAACACTGTGGAAGCCTATTTCTC  348
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGTGTGCTAAAAAACACAAGCAAACACTGTGGAAGCCTATTTCTC  342

seq1  CTTTTAGCCATATTGAGGGTAAGCTGTGGTATGTTTCTAATAATATCTGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGCCATATTGAGGGTAAGCTGTGGTATGTTTCTAATAATATCTGG  392

seq1  TACATTGTGGACAGGGTTATAATTAAAGGGATGGAAATTAAAATCCTGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGTGGACAGGGTTATAATTAAAGGGATGGAAATTAAAATCCTGTT  442

seq1  CATTGAATTTAGAACCTTGTAGAGTGTGTTAACCACCAAAGCCAGTAAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAATTTAGAACCTTGTAGAGTGTGTTAACCACCAAAGCCAGTAAAT  492

seq1  CTTGAATGAGTAGGTTTTAATTAAGTGAGAACAAGATTTTAATGCACATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATGAGTAGGTTTTAATTAAGTGAGAACAAGATTTTAATGCACATT  542

seq1  TCGGATGAGACTGGCTGTAGTTTGTGTGATAACACAGTAGGCTTAATTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGATGAGACTGGCTGTAGTTTGTGTGATAACACAGTAGGCTTAATTGA  592

seq1  CTATTTAAAAGCAACCTTTTGTGTGTATGCTCGGGTTTGAATCCACATAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTAAAAGCAACCTTTTGTGTGTATGCTCGGGTTTGAATCCACATAC  642

seq1  TCTTTTCTGCATGCTAATCATGTGTGCCACTTCGTGATACTCTATCCCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTGCATGCTAATCATGTGTGCCACTTCGTGATACTCTATCCCAT  692

seq1  TTACTAACTTATTATTTATTACTTTATTAACAACCTTACAGGCTGAATAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAACTTATTATTTATTACTTTATTAACAACCTTACAGGCTGAATAA  742

seq1  TACCATTTCAGCCCATTTTCCTAACTCAAATTCTGTAAGCATTTCTACAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTTCAGCCCATTTTCCTAACTCAAATTCTGTAAGCATTTCTACAT  792

seq1  TTTCACCAAATGCTTTCTCCCTTCACAAATGTTATTTTAAAATAATTAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACCAAATGCTTTCTCCCTTCACAAATGTTATTTTAAAATAATTAGA  842

seq1  AGTTATGAAAATAGTAGAATCATATGTGTCCTGTTCCCAGCTTCCTGCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGAAAATAGTAGAATCATATGTGTCCTGTTCCCAGCTTCCTGCAA  892

seq1  TGATAACATCTTACATATGCACAACATCATTATCAACATAGGGAAGTTAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACATCTTACATATGCACAACATCATTATCAACATAGGGAAGTTAA  942

seq1  GAGTGTTACTTTTGGAAGGCTGCAAATATTACCCAAAGAAGTCCATGCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTACTTTTGGAAGGCTGCAAATATTACCCAAAGAAGTCCATGCTG  992

seq1  TATTCTCAGAGGCTGGTGAACACACTATCTCCGTGATAATAAAGAATTC  1047
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCAGAGGCTGGTGAACACACTATCTCCGTGATAATAAAGAATTC  1041