BAC Information

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BAC

Clone NameB6Ng01-124H22
Chromosome18 (Build37)
Map Location 51,273,958 - 51,274,921
singlet/doubletsinglet
Overlap genenone
Upstream geneHsd17b4, LOC626721, LOC667233, Gm93, Hdhd1a, LOC100042373, LOC100042385
Downstream genePrr16, EG240289
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124H22.bB6Ng01-124H22.g
ACCDH927388DH927389
length1,205939
definitionDH927388|Mus musculus domesticus DNA, BAC clone: B6Ng01-124H22, 5' end.DH927389|Mus musculus domesticus DNA, BAC clone: B6Ng01-124H22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattctcgatcttacagcacaagccattgctgtt
ttattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtataaggagataggaatggatcaattcgc
atttttctacatgataaccaccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagg
gagcataggtgtgtgggttcatctctgggtcttcaattttgttccattgg
tctacttgtctgtcactataccaataccatgcagtttttatcacaattgc
tctgtagtacaactttaggtccagcatagtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctctgttttttattattccagatg
aatctgcccgattgccctttctaattcattgaagaattgagttggaattt
ttgatggggactgcattgaatctgtagattgccttttggcaagtagccat
ttttacaatgtttgatccttgccaatccatgagcatgggagatcttttcc
atcttctgagttctttctttaattttctttcttcagagacttgaagttct
tatcatacagatctttcaccttccttagtaagagtcacaccaaggtattt
tatattatttgtgactatgagaaggtgtgtttccctgaattctttctagt
ctttatcttttagtacagaaaaggccatgacttgattgagttaattttat
aatcagctacttcattggaactggttataggcttagaatcctctggagga
aatttaagggcacttaataatacactcattattcggcaaaaagtgaaatt
gagcatctcctttcccaatggataaccttgaatatctcttttgtgcgttc
aaatg
gaattcctgaaggcttgaagcataaagaaaagttttatcttcatcaaaat
acttctccctgagagatgggaggaggaagtttagaggaggtggaagttaa
gagaggacattgttggtgataacacattgattatcagatgtatttccagg
ccctgattgtcacagacaactatgcataataacttgctaaagacacaggt
tgatgaacataatctacaggacacctaacttagtaggtctgcaagtggat
ctgggaatttcatttaaacagacttgtaggctttcttgtggtcacacttt
gcaacactttgttggaaagattaaaacttaggcttcttttagctgcacta
acccttgtagatcagctacaattattatctatttgttttatagatgatta
aactaaaactttaggggtatgttaaagggcatcttcaatctccccataac
aaacaaaacaaactgaaaattacatctcttttgtgtagccctagttgtca
cagaactcattatgtagaccagtcttacctcagactaacacagatacacc
tcccctgttccagggttaaagatatatgccaccacacacaataatgcctc
tttttatttatcagctgcttagaaataatcactaagtaatactatactat
attggtttaaaggtgtttcttaaattatactcaattagcagaactattga
aaataacttctctacaaatacttgagaataaatgatcaatgagggtgttt
tgtatatatctttaaattaattcaactgatcaaagttttaagtgctatct
ggactagatctagtctgagaagaagacattcactacatttggatagaaat
gccccatagaacaatagatattcactatgagtctatatgaagagagcttc
tcagctgtctctctctctcctcaattttaactgggttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_51273958_51274921
seq2: B6Ng01-124H22.g_69_1007 (reverse)

seq1  TGAACACAGTTAAAAAAGTGAGGAGAGAGAGAGAGACAGCTGGAGATAGC  50
      ||||| |||||  |||| ||||  ||||||||||||||||| |||| |||
seq2  TGAACCCAGTT--AAAATTGAG--GAGAGAGAGAGACAGCT-GAGA-AGC  44

seq1  TCTCCTTTATATTAGACTCATATGTGAAATTATCTATTTGTTTCTATGGG  100
      ||| ||| ||| |||||||||| |||||  ||||||||   |||||||||
seq2  TCT-CTTCATA-TAGACTCATA-GTGAA--TATCTATT--GTTCTATGGG  87

seq1  GGCAATTTCTTATCCAAATGTAGTGAATGTCTTCTTCTCAGACTAGATTC  150
      |   ||||| ||||||||||||||||||||||||||||||||||||| ||
seq2  G--CATTTC-TATCCAAATGTAGTGAATGTCTTCTTCTCAGACTAGA-TC  133

seq1  TTGTCCAGAATAAGCACTTAAAACTTTTGTTCAGTTGAATTAATTTAAAG  200
      | |||||||   |||||||||||| |||| ||||||||||||||||||||
seq2  TAGTCCAGA--TAGCACTTAAAAC-TTTGATCAGTTGAATTAATTTAAAG  180

seq1  ATATATACAAAAACACCCTCATTTAACCATTTAATTCTCAAGTATTTGTA  250
      |||||||| |||||||||||| || | ||||| |||||||||||||||||
seq2  ATATATAC-AAAACACCCTCA-TTGATCATTT-ATTCTCAAGTATTTGTA  227

seq1  GAGAAGTTATTTTTCAATAGTTCTGCTTATTGAGTATAATTTAAGAAACA  300
      ||||||||| ||||||||||||||||| ||||||||||||||||||||||
seq2  GAGAAGTTA-TTTTCAATAGTTCTGCTAATTGAGTATAATTTAAGAAACA  276

seq1  CCTTTAAACCAATATAGTATAGTATTACTTAGTGATTATTTCTAAGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAACCAATATAGTATAGTATTACTTAGTGATTATTTCTAAGCAGC  326

seq1  TGATAAATAAAAAAGAGGCATTATTGTGTGTGGTGGCATATATCTTTAAC  400
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAT-AAAAAGAGGCATTATTGTGTGTGGTGGCATATATCTTTAAC  375

seq1  CCTGGAACAGGGGAGGTGTATCTGTGTTAGTCTGAGGTAAGACTGGTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACAGGGGAGGTGTATCTGTGTTAGTCTGAGGTAAGACTGGTCTA  425

seq1  CATAATGAGTTCTGTGACAACTAGGGCTACACAAAAGAGATGTAATTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGAGTTCTGTGACAACTAGGGCTACACAAAAGAGATGTAATTTTC  475

seq1  AGTTTGTTTTGTTTGTTATGGGGAGATTGAAGATGCCCTTTAACATACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTTTTGTTTGTTATGGGGAGATTGAAGATGCCCTTTAACATACCC  525

seq1  CTAAAGTTTTAGTTTAATCATCTATAAAACAAATAGATAATAATTGTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTTTTAGTTTAATCATCTATAAAACAAATAGATAATAATTGTAGC  575

seq1  TGATCTACAAGGGTTAGTGCAGCTAAAAGAAGCCTAAGTTTTAATCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTACAAGGGTTAGTGCAGCTAAAAGAAGCCTAAGTTTTAATCTTTC  625

seq1  CAACAAAGTGTTGCAAAGTGTGACCACAAGAAAGCCTACAAGTCTGTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAGTGTTGCAAAGTGTGACCACAAGAAAGCCTACAAGTCTGTTTA  675

seq1  AATGAAATTCCCAGATCCACTTGCAGACCTACTAAGTTAGGTGTCCTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATTCCCAGATCCACTTGCAGACCTACTAAGTTAGGTGTCCTGTA  725

seq1  GATTATGTTCATCAACCTGTGTCTTTAGCAAGTTATTATGCATAGTTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGTTCATCAACCTGTGTCTTTAGCAAGTTATTATGCATAGTTGTC  775

seq1  TGTGACAATCAGGGCCTGGAAATACATCTGATAATCAATGTGTTATCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAATCAGGGCCTGGAAATACATCTGATAATCAATGTGTTATCACC  825

seq1  AACAATGTCCTCTCTTAACTTCCACCTCCTCTAAACTTCCTCCTCCCATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTCCTCTCTTAACTTCCACCTCCTCTAAACTTCCTCCTCCCATC  875

seq1  TCTCAGGGAGAAGTATTTTGATGAAGATAAAACTTTTCTTTATGCTTCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGGAGAAGTATTTTGATGAAGATAAAACTTTTCTTTATGCTTCAA  925

seq1  GCCTTCAGGAATTC  964
      ||||||||||||||
seq2  GCCTTCAGGAATTC  939