BAC Information

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BAC

Clone NameB6Ng01-124N11
Chromosome1 (Build37)18 (Build37)
Map Location 143,318,513 - 143,319,37059,680,169 - 59,680,210
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneKcnt2, EG226472
Downstream geneLOC639376
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124N11.bB6Ng01-124N11.g
ACCDH927642DH927643
length852441
definitionDH927642|Mus musculus domesticus DNA, BAC clone: B6Ng01-124N11, 5' end.DH927643|Mus musculus domesticus DNA, BAC clone: B6Ng01-124N11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(143,318,513 - 143,319,370)(59,680,169 - 59,680,210)
sequence
gaattccctgagccctcattttacatgctaagtttactctttcataatga
ctttcattatttttaatcatcccattttctgcttcatcatatagtttttc
tataagtagggagagttaattttagttccttttttatttcctctaaggtt
atcctctttatctacacccttttccatagatttattattataggaataaa
gcattcccataacatagtaaagaaaaaatgcagcatcttgattactacaa
gtttattatcctataaatttgaaaataaggtacatgataggctccattgg
cttctgtgcttttgtctgctttgggtagcatcttataagcacaaccaaca
ccagaacctacttcaagtactgttgatgtacctgtggtctactgtttcct
tactggctgttgatgctattttttttcctttttttttttatagcttattc
cttaagagagtgaattaattatctgacataatcatctcctttcaggtcta
ttctattccctcttctatattcaccctatacagaaaagaaaaaagagagg
aaagaaagaaaaaggacccagtccagacatgtagctattgaagggagttc
ttaaaaagtgtgatgtaatgtgatataaatgtggaagtataattctcttg
attgcacctacaggagtgaggaaaggtacaaacacagctttctttaagag
tgtatgccctgattgccaatccatgcacataattctggcacattaattaa
ggaatataggtctggttatgttggccaacatgatcagctgaataactact
ctagggttatgagtttacaattgactttgattttttgctttttttattcc
cc
ctaaaattatatcagtgattattaagctgttttataataggactgctatt
aggttcttttctgataatcaaaacttcagtgagaactttgtcattcttcc
atgtgtcactagttaattgctcttatatagtacccagactttcttctact
cagaggacagttcaggaggttgtaaaacaattaaccaaaggtcataaaag
tgaactaatgattactataggttctaggaaagaaggtgaaatattgattt
ggtttaatctaaacaaaacttcactaataacttagttatggtttcctact
ttcaatgaacctgtggagttatgataggtgatggatatttaaccagataa
ttactcctaatggatatgcatgtatacattctctgttgtaaacttcaact
tcaatttattatttgattgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_143318513_143319370
seq2: B6Ng01-124N11.b_48_899 (reverse)

seq1  GGGGAATAAAAAGAAGGCAAAAAATCAAGTTCAATTTGTATACTCATATA  50
      |||||||||||  || ||||||||||||  |||| ||||| ||||||| |
seq2  GGGGAATAAAA--AAAGCAAAAAATCAAAGTCAA-TTGTAAACTCATA-A  46

seq1  CCCTTGAGTAGTCTTCTACTTGATCATGGTTGGCCAACATAACCAGGCCT  100
      |||| |||||||  |  |  ||||||| |||||||||||||||||| |||
seq2  CCCTAGAGTAGTTATTCAGCTGATCAT-GTTGGCCAACATAACCAGACCT  95

seq1  ATATTCCTTAATTAATGTGCCAGAATTATGTGCCTGGATTGGCATATCAG  150
      ||||||||||||||||||||||||||||||||| |||||||||| |||||
seq2  ATATTCCTTAATTAATGTGCCAGAATTATGTGCATGGATTGGCA-ATCAG  144

seq1  GGCATACACTCTTGAAGAAAGCTGTGTTTGTACCTTTCCTCACTCCTGTA  200
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGCATACACTCTTAAAGAAAGCTGTGTTTGTACCTTTCCTCACTCCTGTA  194

seq1  GGTGCAATCAAGAGAATTATACTTCCACATTTATATCACATTACATCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAATCAAGAGAATTATACTTCCACATTTATATCACATTACATCACA  244

seq1  CTTTTTAAGAACTCCCTTCAATAGCTACATGTCTGGACTGGGTCCTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAGAACTCCCTTCAATAGCTACATGTCTGGACTGGGTCCTTTTT  294

seq1  CTTTCTTTCCTCTCTTTTTTCTTTTCTGTATAGGGTGAATATAGAAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCCTCTCTTTTTTCTTTTCTGTATAGGGTGAATATAGAAGAGG  344

seq1  GAATAGAATAGACCTGAAAGGAGATGATTATGTCAGATAATTAATTCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAATAGACCTGAAAGGAGATGATTATGTCAGATAATTAATTCACT  394

seq1  CTCTTAAGGAATAAGCTATAAAAAAAAAAAGGAAAAAAAATAGCATCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAGGAATAAGCTATAAAAAAAAAAAGGAAAAAAAATAGCATCAAC  444

seq1  AGCCAGTAAGGAAACAGTAGACCACAGGTACATCAACAGTACTTGAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTAAGGAAACAGTAGACCACAGGTACATCAACAGTACTTGAAGTA  494

seq1  GGTTCTGGTGTTGGTTGTGCTTATAAGATGCTACCCAAAGCAGACAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGGTGTTGGTTGTGCTTATAAGATGCTACCCAAAGCAGACAAAAG  544

seq1  CACAGAAGCCAATGGAGCCTATCATGTACCTTATTTTCAAATTTATAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGCCAATGGAGCCTATCATGTACCTTATTTTCAAATTTATAGGA  594

seq1  TAATAAACTTGTAGTAATCAAGATGCTGCATTTTTTCTTTACTATGTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAACTTGTAGTAATCAAGATGCTGCATTTTTTCTTTACTATGTTAT  644

seq1  GGGAATGCTTTATTCCTATAATAATAAATCTATGGAAAAGGGTGTAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGCTTTATTCCTATAATAATAAATCTATGGAAAAGGGTGTAGATA  694

seq1  AAGAGGATAACCTTAGAGGAAATAAAAAAGGAACTAAAATTAACTCTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGATAACCTTAGAGGAAATAAAAAAGGAACTAAAATTAACTCTCCC  744

seq1  TACTTATAGAAAAACTATATGATGAAGCAGAAAATGGGATGATTAAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATAGAAAAACTATATGATGAAGCAGAAAATGGGATGATTAAAAAT  794

seq1  AATGAAAGTCATTATGAAAGAGTAAACTTAGCATGTAAAATGAGGGCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAGTCATTATGAAAGAGTAAACTTAGCATGTAAAATGAGGGCTCA  844

seq1  GGGAATTC  858
      ||||||||
seq2  GGGAATTC  852

seq1: chr18_59680169_59680210
seq2: B6Ng01-124N11.g_480_516 (reverse)

seq1  CACACACAGGCATGCACACACACACACACAATCAAA-AATAAA  42
      ||||||||      |||||||||||||||||||||| ||||||
seq2  CACACACA------CACACACACACACACAATCAAATAATAAA  37