BAC Information

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BAC

Clone NameB6Ng01-124P23
Chromosome18 (Build37)
Map Location 62,459,095 - 62,592,975
singlet/doubletdoublet
Overlap geneHtr4
Upstream genePpargc1b, LOC667675, 4933429F08Rik, Csnk1a1, Il17b, Pcyox1l, LOC100042730, Grpel2, Afap1l1, LOC100042738, Ablim3, Sh3tc2, Adrb2
Downstream geneFbxo38, Spink10, EG408198, 2700046A07Rik, Apcdd1, Napg, 9430028L06Rik, 9030411M15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124P23.bB6Ng01-124P23.g
ACCDH927757DH927758
length7961,073
definitionDH927757|Mus musculus domesticus DNA, BAC clone: B6Ng01-124P23, 5' end.DH927758|Mus musculus domesticus DNA, BAC clone: B6Ng01-124P23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,459,095 - 62,459,884)(62,591,903 - 62,592,975)
sequence
gaattcttttcgtcatctcttcccccttaatgcaccaacctcagaaaaga
ggagcggtatcattataggttctatgaaaacatcttggttgcatggcttg
tcaggttatagtctgaatcttttaattctgcaaatgaattgaaattgcaa
tagaactggtggcaggggctcttgtgtaaatcttgaaaggtcttaagtag
gtaaaatataaaaagggtaggtgttaccagtaagtatcctaaaaaggatg
gaaactagtagaagggggttttaggagacttaagtttcagattccatgtg
cagactagaggcaaaggcagcaccaagcattttattgtgctccgggtgtg
tatgggtcagagtcacctcaatgtgctgctgcttttcaagtcttgggctt
cagctagaatcatcagaagtgcagagatgattcaataactgaaagttgga
attgcttcaaggctcatccatcctcaaggcggcaggttagtgctgttgtc
ctggagcctctggggtagctccaattatcctacagggcctccctaggtat
ttctgcatctgcaggaaatggtggttggattcctagtgcacgcgctatgt
ttttgcacgtagaatgttggctacagagtcatgcgttttgaacacagaag
ctccagctgatgacgttgttttgcacagttgtggaactttggaaaaggaa
aagctcagctggtggaactggacctctggggacaggggaatgagcccatt
tgaggtttatcaccttcaccccttgctttctgattcattaagatgt
gaattctctattctcacgtacaatgtgttttcaatttggctttctagaat
tttccctcttcttttgcttccttcttagctgtacctcccaaccctctatt
actggcttttcacttctgtgacatcgtctcttatgtagcttcattcccca
gacagttacatctacttgtatgggtttaaatagcatctggctctgagaat
gacttacctttgagtttgttcctgatagagacttcccatacatatcaaga
tttgacattaagctgatttcttgactgctgcattaaactatgcagcagct
acttaatacatattgcattttctgtatcccacaaatattctacctatagc
atttccaatctggaattcccaactgaaatcaagagttacactgaccaaac
tcttggttgtatctaaccatacagaagagccctcttatattaaaaataca
cctgctccaaatcacagtctccattacttccattggagctggaggacaat
tgttgttttttatccatggcatcactttagcagactccctttatgtttgt
tttttagcagaaaaaaatgaggattctttcataatcttataattctcact
actaataagctcagaccctaaagtccatatcattccaagttaaaccctat
gctttaaatgtcccacagaccaatgcattgtctcccccttctattctatt
gtattttattatttcttaagctcctctcctgcgttcttacctcctcatta
actctgtagcagcctgtcagtcacatcttgcctctggagatttatattac
ctatgttctgcctgctgtatgcttctccaagatacctacaagtatatttc
cccctgctccttaatgcctttattcaatgtcacctcctcatagagcccac
tctaacttccctatttagagtttcaatctgccacaacccaccttttaaag
atttatatctgaaaattgtgcgtgtgggtgcatgcacccacatgtgtgca
ttattcacgtgtgagaggttgcccaaggaggcccagaaggttttgatttc
tttgagttggagtaacccggcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_62459095_62459884
seq2: B6Ng01-124P23.b_48_843

seq1  GAATTCTTTTCGTCATCTCTTCCCCCTTAATGCACCAACCTCAGAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCGTCATCTCTTCCCCCTTAATGCACCAACCTCAGAAAAGA  50

seq1  GGAGCGGTATCATTATAGGTTCTATGAAAACATCTTGGTTGCATGGCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCGGTATCATTATAGGTTCTATGAAAACATCTTGGTTGCATGGCTTG  100

seq1  TCAGGTTATAGTCTGAATCTTTTAATTCTGCAAATGAATTGAAATTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTATAGTCTGAATCTTTTAATTCTGCAAATGAATTGAAATTGCAA  150

seq1  TAGAACTGGTGGCAGGGGCTCTTGTGTAAATCTTGAAAGGTCTTAAGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTGGTGGCAGGGGCTCTTGTGTAAATCTTGAAAGGTCTTAAGTAG  200

seq1  GTAAAATATAAAAAGGGTAGGTGTTACCAGTAAGTATCCTAAAAAGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATATAAAAAGGGTAGGTGTTACCAGTAAGTATCCTAAAAAGGATG  250

seq1  GAAACTAGTAGAAGGGGGTTTTAGGAGACTTAAGTTTCAGATTCCATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAGTAGAAGGGGGTTTTAGGAGACTTAAGTTTCAGATTCCATGTG  300

seq1  CAGACTAGAGGCAAAGGCAGCACCAAGCATTTTATTGTGCTCCGGGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTAGAGGCAAAGGCAGCACCAAGCATTTTATTGTGCTCCGGGTGTG  350

seq1  TATGGGTCAGAGTCACCTCAATGTGCTGCTGCTTTTCAAGTCTTGGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTCAGAGTCACCTCAATGTGCTGCTGCTTTTCAAGTCTTGGGCTT  400

seq1  CAGCTAGAATCATCAGAAGTGCAGAGATGATTCAATAACTGAAAGTTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGAATCATCAGAAGTGCAGAGATGATTCAATAACTGAAAGTTGGA  450

seq1  ATTGCTTCAAGGCTCATCCATCCTCAAGGCGGCAGGTTAGTGCTGTTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTCAAGGCTCATCCATCCTCAAGGCGGCAGGTTAGTGCTGTTGTC  500

seq1  CTGGAGCCTCTGGGGTAGCTCCAATTATCCTACAGGGCCTCCCTAGGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCCTCTGGGGTAGCTCCAATTATCCTACAGGGCCTCCCTAGGTAT  550

seq1  TTCTGCATCTGCAGGAAATGGTGGTTGGATTCCTAGTGCACGCGCTATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATCTGCAGGAAATGGTGGTTGGATTCCTAGTGCACGCGCTATGT  600

seq1  TTTTGCACGTAGAATGTTGGCTACAGAGTCATGCG-TTTGAACACAGAAG  649
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTTTGCACGTAGAATGTTGGCTACAGAGTCATGCGTTTTGAACACAGAAG  650

seq1  CTCCAGCTGATGACGTTGTTTTGCACAGTTGTGGAACTTTGGAAA--GGA  697
      |||||||||||||||||||||||||||||||||||||||||||||  | |
seq2  CTCCAGCTGATGACGTTGTTTTGCACAGTTGTGGAACTTTGGAAAAGGAA  700

seq1  AAGCTCAGCTGGTGGAACTGGACCTCTGGGGACAGGGGAAGGAG-CCACT  746
      |||||||||||||||||||||||||||||||||||||||| ||| ||| |
seq2  AAGCTCAGCTGGTGGAACTGGACCTCTGGGGACAGGGGAATGAGCCCATT  750

seq1  TGAGGTTTATCACC-TCA-CCCTTGCTTTCTGATTCATAAAGATGT  790
      |||||||||||||| ||| ||||||||||||||||||| |||||||
seq2  TGAGGTTTATCACCTTCACCCCTTGCTTTCTGATTCATTAAGATGT  796

seq1: chr18_62591903_62592975
seq2: B6Ng01-124P23.g_68_1140 (reverse)

seq1  CTGCC-GGTAACTCCAACTCCAGGAAATCCAAAACCTCT-GGCCTCCTT-  47
      ||||| ||| |||||||||| | |||||| ||| | ||| ||||||||| 
seq2  CTGCCGGGTTACTCCAACTCAAAGAAATCAAAACCTTCTGGGCCTCCTTG  50

seq1  GGCAACCTTCTCACACGTGAAT-ATGCACACATGTGGGTGCATGCACCCA  96
      ||||||| |||||||||||||| |||||||||||||||||||||||||||
seq2  GGCAACC-TCTCACACGTGAATAATGCACACATGTGGGTGCATGCACCCA  99

seq1  CACGCACAATTTTCAGATATTAAATCTTTAAAAGGTGGGTTGTTGGCAGA  146
      ||||||||||||||||||| |||||||||||||||||||||| |||||||
seq2  CACGCACAATTTTCAGATA-TAAATCTTTAAAAGGTGGGTTG-TGGCAGA  147

seq1  TTGAAACTCTAAATAGGG-AGTTAGAGTGGGCTCTATTGAGGAGGTGACA  195
      |||||||||||||||||| ||||||||||||||||| |||||||||||||
seq2  TTGAAACTCTAAATAGGGAAGTTAGAGTGGGCTCTA-TGAGGAGGTGACA  196

seq1  TTTGAATAAAGGCATTAAGGAGCAGGGGGAAATATACTTGTAGGTATCTT  245
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTGAATAAAGGCATTAAGGAGCAGGGGGAAATATACTTGTAGGTATCTT  245

seq1  GGAGAAGCATACAGCAGGCAGAACATAGGTAATATAAATCTCCAGAGGCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGCATACAGCAGGCAGAACATAGGTAATATAAATCTCCAGAGGCA  295

seq1  AGATGTGACTGACAGGCTGCTACAGAGTTAATGAGGAGGTAAGAACGCAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGACTGACAGGCTGCTACAGAGTTAATGAGGAGGTAAGAACGCAG  345

seq1  GAGAGGAGCTTAAGAAATAATAAAATACAATAGAATAGAAGGGGGAGACA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGCTTAAGAAATAATAAAATACAATAGAATAGAAGGGGGAGACA  395

seq1  ATGCATTGGTCTGTGGGACATTTAAAGCATAGGGTTTAACTTGGAATGAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTGGTCTGTGGGACATTTAAAGCATAGGGTTTAACTTGGAATGAT  445

seq1  ATGGACTTTAGGGTCTGAGCTTATTAGTAGTGAGAATTATAAGATTATGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTTTAGGGTCTGAGCTTATTAGTAGTGAGAATTATAAGATTATGA  495

seq1  AAGAATCCTCATTTTTTTCTGCTAAAAAACAAACATAAAGGGAGTCTGCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCCTCATTTTTTTCTGCTAAAAAACAAACATAAAGGGAGTCTGCT  545

seq1  AAAGTGATGCCATGGATAAAAAACAACAATTGTCCTCCAGCTCCAATGGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGATGCCATGGATAAAAAACAACAATTGTCCTCCAGCTCCAATGGA  595

seq1  AGTAATGGAGACTGTGATTTGGAGCAGGTGTATTTTTAATATAAGAGGGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGGAGACTGTGATTTGGAGCAGGTGTATTTTTAATATAAGAGGGC  645

seq1  TCTTCTGTATGGTTAGATACAACCAAGAGTTTGGTCAGTGTAACTCTTGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGTATGGTTAGATACAACCAAGAGTTTGGTCAGTGTAACTCTTGA  695

seq1  TTTCAGTTGGGAATTCCAGATTGGAAATGCTATAGGTAGAATATTTGTGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTGGGAATTCCAGATTGGAAATGCTATAGGTAGAATATTTGTGG  745

seq1  GATACAGAAAATGCAATATGTATTAAGTAGCTGCTGCATAGTTTAATGCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGAAAATGCAATATGTATTAAGTAGCTGCTGCATAGTTTAATGCA  795

seq1  GCAGTCAAGAAATCAGCTTAATGTCAAATCTTGATATGTATGGGAAGTCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAAGAAATCAGCTTAATGTCAAATCTTGATATGTATGGGAAGTCT  845

seq1  CTATCAGGAACAAACTCAAAGGTAAGTCATTCTCAGAGCCAGATGCTATT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGGAACAAACTCAAAGGTAAGTCATTCTCAGAGCCAGATGCTATT  895

seq1  TAAACCCATACAAGTAGATGTAACTGTCTGGGGAATGAAGCTACATAAGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCATACAAGTAGATGTAACTGTCTGGGGAATGAAGCTACATAAGA  945

seq1  GACGATGTCACAGAAGTGAAAAGCCAGTAATAGAGGGTTGGGAGGTACAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGATGTCACAGAAGTGAAAAGCCAGTAATAGAGGGTTGGGAGGTACAG  995

seq1  CTAAGAAGGAAGCAAAAGAAGAGGGAAAATTCTAGAAAGCCAAATTGAAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAGGAAGCAAAAGAAGAGGGAAAATTCTAGAAAGCCAAATTGAAA  1045

seq1  ACACATTGTACGTGAGAATAGAGAATTC  1073
      ||||||||||||||||||||||||||||
seq2  ACACATTGTACGTGAGAATAGAGAATTC  1073