MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-127K02
Chromosome	18 (Build37)
Map Location	43,763,718 - 43,764,836
singlet/doublet	singlet
Overlap gene	Jakmip2
Upstream gene	LOC100042037, Ppp2r2b, LOC100042046, LOC100042051, EG666594, Stk32a, Dpysl3, LOC100042074, LOC100042807
Downstream gene	Spink3, Scgb3a2, Gm94, Spink5, EG433178, LOC666969, EG433180, Spink12, LOC100042855, 9530002K18Rik, Spink11, Npy6r, Myot, Dcp2, Mcc
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042037 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042037
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ppp2r2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72930 MGI:1920180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100042046 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042046
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100042051 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042051
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	EG666594 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666594 MGI:3643329
definition	note : predicted gene, EG666594 pseudo : _no_value

name	Stk32a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269019 MGI:2442403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dpysl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22240 MGI:1349762
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042074 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042074
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 167 ESTs, 1 Protein

name	LOC100042807 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042807
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 238 ESTs, 8 Proteins

name	Jakmip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76217 MGI:1923467
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 39 ESTs, 1 Protein

name	Spink3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20730 MGI:106202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scgb3a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:117158 MGI:2153470
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm94 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225443 MGI:2684940
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spink5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72432 MGI:1919682
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433178 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433178 MGI:3646952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666969 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 65 ESTs, 13 Proteins pseudo : _no_value

name	EG433180 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433180 MGI:3648654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spink12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78242 MGI:1925492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042855 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042855
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	9530002K18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77424 MGI:1924674
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 1 Protein

name	Spink11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433181 MGI:3588289
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Npy6r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18169 MGI:1098590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myot (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58916 MGI:1889800
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dcp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70640 MGI:1917890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 125 ESTs, 4 Proteins

name	Mcc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328949 MGI:96930
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppp2r2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67972401 GeneID:72930 MGI:1920180
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform transcript_id : NM_027531.1

name	Ppp2r2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803309 GeneID:72930 MGI:1920180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform transcript_id : NM_028392.2

name	Stk32a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379975 GeneID:269019 MGI:2442403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine/threonine kinase 32A transcript_id : NM_178749.3

name	Dpysl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142389091 GeneID:22240 MGI:1349762
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dihydropyrimidinase-like 3 transcript_id : NM_009468.2

name	LOC100042074 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269744 GeneID:100042074
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 167 ESTs, 1 Protein product : similar to 6030465E24Rik protein transcript_id : XM_001477500.1

name	LOC100042807 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269807 GeneID:100042807
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 238 ESTs, 8 Proteins product : similar to Eukaryotic translation initiation factor 3, subunit 1 alpha transcript_id : XM_001479281.1

name	Jakmip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149269809 GeneID:76217 MGI:1923467
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 39 ESTs, 1 Protein product : janus kinase and microtubule interacting protein 2, transcript variant 1 transcript_id : XM_129010.6

name	Spink3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802485 GeneID:20730 MGI:106202
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine peptidase inhibitor, Kazal type 3 transcript_id : NM_009258.4

name	Scgb3a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16905070 GeneID:117158 MGI:2153470
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secretoglobin, family 3A, member 2 transcript_id : NM_054038.1

name	Gm94 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930765 GeneID:225443 MGI:2684940
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 94, (NCBI) transcript_id : NM_001033280.2

name	Spink5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487158 GeneID:72432 MGI:1919682
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine peptidase inhibitor, Kazal type 5 transcript_id : NM_001081180.1

name	EG433178 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113722128 GeneID:433178 MGI:3646952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG433178 transcript_id : NM_001039218.2

name	EG433180 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701487 GeneID:433180 MGI:3648654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG433180 transcript_id : NM_001013797.1

name	Spink12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354206 GeneID:78242 MGI:1925492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine peptidase inhibitor, Kazal type 11 transcript_id : NM_030061.3

name	LOC100042855 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269812 GeneID:100042855
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to vitellogenin-like 1 transcript_id : XM_001479367.1

name	Spink11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801779 GeneID:433181 MGI:3588289
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine peptidase inhibitor, Kazal type 11 transcript_id : NM_001048217.2

name	Npy6r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368817 GeneID:18169 MGI:1098590
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuropeptide Y receptor Y6 transcript_id : NM_010935.3

name	Myot (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371751 GeneID:58916 MGI:1889800
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myotilin transcript_id : NM_001033621.2

name	Dcp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94404430 GeneID:70640 MGI:1917890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 125 ESTs, 4 Proteins product : DCP2 decapping enzyme homolog (S. cerevisiae) transcript_id : XM_140308.6

name	Mcc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149269597 GeneID:328949 MGI:96930
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mutated in colorectal cancers transcript_id : XM_001471531.1

name	Ppp2r2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312161 CCDS:CCDS29216.1 GeneID:72930 MGI:1920180
definition	GO_component : GO:0000159 - protein phosphatase type 2A complex [Evidence IEA] GO_function : GO:0008601 - protein phosphatase type 2A regulator activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform isoform 2 protein_id : NP_082668.1

name	Ppp2r2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67972402 GeneID:72930 MGI:1920180
definition	GO_component : GO:0000159 - protein phosphatase type 2A complex [Evidence IEA] GO_function : GO:0008601 - protein phosphatase type 2A regulator activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform isoform 1 protein_id : NP_081807.1

name	Stk32a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520199 CCDS:CCDS29218.1 GeneID:269019 MGI:2442403
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : serine/threonine kinase 32A protein_id : NP_848864.1

name	Dpysl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681219 GeneID:22240 MGI:1349762
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0007399 - nervous system development [Evidence IDA] codon_start : 1 note : collapsin response mediator protein 4; unc-33-like phosphoprotein product : dihydropyrimidinase-like 3 protein_id : NP_033494.1

name	LOC100042074 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269745 GeneID:100042074
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477550.1

name	LOC100042807 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269808 GeneID:100042807
definition	codon_start : 1 product : similar to Eukaryotic translation initiation factor 3, subunit 1 alpha protein_id : XP_001479331.1

name	Jakmip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149269810 GeneID:76217 MGI:1923467
definition	codon_start : 1 product : janus kinase and microtubule interacting protein 2 isoform 1 protein_id : XP_129010.4

name	Spink3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678105 GeneID:20730 MGI:106202
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] codon_start : 1 note : prostatic secretory glycoprotein product : serine protease inhibitor, Kazal type 3 protein_id : NP_033284.1

name	Scgb3a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16905071 CCDS:CCDS29220.1 GeneID:117158 MGI:2153470
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : pneumo secretory protein 1; uteroglobin related protein 1 product : secretoglobin, family 3A, member 2 protein_id : NP_473379.1

name	Gm94 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701792 GeneID:225443 MGI:2684940
definition	codon_start : 1 product : hypothetical protein LOC225443 protein_id : NP_001028452.1

name	Spink5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487159 GeneID:72432 MGI:1919682
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA]; GO:0030414 - protease inhibitor activity [Evidence IMP] GO_process : GO:0045861 - negative regulation of proteolysis [Evidence IMP]; GO:0030155 - regulation of cell adhesion [Evidence IMP] codon_start : 1 note : Netherton syndrome product : serine protease inhibitor, Kazal type 5 protein_id : NP_001074649.1

name	EG433178 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113722129 GeneID:433178 MGI:3646952
definition	codon_start : 1 product : Kazal type serine protease inhibitor 5-like 2 protein_id : NP_001034307.2

name	EG433180 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701488 CCDS:CCDS29224.1 GeneID:433180 MGI:3648654
definition	codon_start : 1 product : hypothetical protein LOC433180 protein_id : NP_001013819.1

name	Spink12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229257 CCDS:CCDS29225.1 GeneID:78242 MGI:1925492
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] codon_start : 1 product : serine protease inhibitor Kazal type 12 protein_id : NP_084337.1

name	LOC100042855 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269813 GeneID:100042855
definition	codon_start : 1 product : similar to vitellogenin-like 1 protein_id : XP_001479417.1

name	Spink11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115292431 GeneID:433181 MGI:3588289
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 product : serine protease inhibitor Kazal type 11 protein_id : NP_001041682.1

name	Npy6r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754884 CCDS:CCDS29227.1 GeneID:18169 MGI:1098590
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004983 - neuropeptide Y receptor activity [Evidence IDA]; GO:0001601 - peptide YY receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : neuropeptide Y receptor Y6 protein_id : NP_035065.1

name	Myot (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84781791 CCDS:CCDS29228.1 GeneID:58916 MGI:1889800
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] codon_start : 1 note : titin immunoglobulin domain protein; titan-like protein product : myotilin protein_id : NP_001028793.1

name	Dcp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94404431 GeneID:70640 MGI:1917890
definition	codon_start : 1 product : decapping enzyme hDcp2 protein_id : XP_140308.6

name	Mcc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149269598 GeneID:328949 MGI:96930
definition	codon_start : 1 product : mutated in colorectal cancers protein_id : XP_001471581.1

name	LOC100042037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042037
definition	number : 3 pseudo : _no_value

name	LOC100042037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042037
definition	number : 2 pseudo : _no_value

name	LOC100042037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042037
definition	number : 1 pseudo : _no_value

name	LOC100042046 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042046
definition	number : 1 pseudo : _no_value

name	LOC100042046 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042046
definition	number : 2 pseudo : _no_value

name	LOC100042046 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042046
definition	number : 3 pseudo : _no_value

name	LOC100042051 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042051
definition	number : 1 pseudo : _no_value

name	LOC100042051 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042051
definition	number : 2 pseudo : _no_value

name	LOC100042051 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042051
definition	number : 3 pseudo : _no_value

name	LOC100042051 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042051
definition	number : 4 pseudo : _no_value

name	LOC666969 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149269811 GeneID:666969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 65 ESTs, 13 Proteins product : similar to High mobility group box 1 pseudo : _no_value transcript_id : XR_034156.1

name	9530002K18Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149269814 GeneID:77424 MGI:1924674
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 1 Protein product : RIKEN cDNA 9530002K18 gene transcript_id : XR_035394.1

clone name	MSMg01-464H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126F06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-379G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307J06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-236D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406M18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-497J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141A17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-457G06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-159A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046C14
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-127K02.b	B6Ng01-127K02.g
ACC	DH929696	DH929697
length	1,213	1,087
definition	DH929696\|Mus musculus domesticus DNA, BAC clone: B6Ng01-127K02, 5' end.	DH929697\|Mus musculus domesticus DNA, BAC clone: B6Ng01-127K02, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcctctgaggctaatgatgagataaatgactgtttccaaaggagaa agaggaagagagaagactccactttaagaggagtgtaagtaaacagacct cttcaagaaaaaagggcctcccagcccttcggtattcctcagttgagaat tctttgtttagctctgtatcccacaccagtcagaatggctaggatcaaat attcaggtgacagcagatgctgttgaggatgtggagaaagaggaacactc ctccattgttggtgggattgcaagcttgtacaaccgctctggaaatcagt ctgatggttcctcagaaaactggacatagtactaccggaagatccagcaa tacctctcctgggcatatacccaggagatgttccaactggtaataaggac acatgctccactatgttcatagcagccctatttataatagccagaagctg gaaagaacacagatgtccctcaacagaggaatggatacagaaaatgtggt acatttacacaatagagtactaatcagctattaaaagcaattaatttatg aaattcttaggcaaatgggtgtatctggaggatatcatcttgagtgaggt aacccaatcacaaaaaaatcacttgatatgcactcagtaataagtggata ttagcccagaaacttagaatacccaagatacaatttgcaaaacacaagaa aatcaagaaggaagaccaatgtgtggatacttcattcctccctagaatag ggaatgaaatacccatggaaggagttacagagacaaagtttggagctaag atgaaaggatgcaccatccagagacttccccacctgggggcccatcctat aatcagccaccaaatgtagacactcttgcatatgccagcaagatttttct gaaaggaccctgatacagctgtctcatatgaggctatgccagtggctggc aaatacagaaatggatgcttacagtcatctataggatggaacacagagct cccactgagagctagagaagtacccaaagaagctgtgggtctacaaccct tataggtgacacatatgaatatcagtactccagactcatgtctctagttg ctattagcagaagatggcttgtcagccaacactggaagagagtccttgcc tgcaaactttatatggccagatacaggaatcagagcagattgggatgtga tgtctatgggagc	gaattcagtgaaagaaatgcaaggaagaaaagctacaagcatataatcag ctgaagccaggaatgaggtgctactacagcagactggcatatcagtacaa gctgagattaacacattgttctgtaacctgaagtggatactagaggcaat ttctccacacaaagtcatagagctacatcctgctacaaacatggcttgct tgaatcaactgaatagaactaagcattaagcctgtgctgaccccatctca ggaactatagtcagggttcgactagaccagcacttaaatagagatgattt tggaatccttaagagacactgttttctatcagcctgcctgtctttgtttc gtcatttgtatgtttcttttttccaccagttaatatttttttaattaaaa ctttttcatatatttgattttgatcacatttttcccctccccttaacttg tctcagatccttcccacttctctacccccctagatacaacagacatactc caggacaggttctatgccaggaatagttagccaacacaaaatgaattctg tgggttgaagaaagcctgccattcttaaagaagccactctgtgtcttctc atgaccctaaactttccctccaccttttacatccctgcatccagcatctc tgttgcttttggccagaagaggtgaggattccttgagcctgtccatgact cttctttgattgctgggcacagaggctcatagcagatattcaaacgcaaa ggtttgttgaacaagacagtgctgttggaagaacagtgaattctgtcagc agtcccagtgtcttttctcagtgccatggctgttctagagaagggcacag ggcgcgtttatgcttggcagaggcttgtatctttctcattcacattgtaa tggacttatagcatggagaggtccagaaagtagcacactattctcaatgt tagcatcgtattaagaatacactttttctcagtattttcttgatttatta cttcttggacagacttgagccacactcttctttagattattcatcctcga acggctttgttgggaaaaaagaacctcagaactgttt
quality values	Open. Hide. 61 47 43 37 61 61 61 61 61 61 61 61 61 47 52 61 61 61 47 55 47 43 59 61 19 32 20 18 18 28 32 23 28 27 41 55 59 61 61 61 59 49 61 59 61 61 59 59 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 61 61 61 61 59 59 59 45 35 44 55 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 37 61 61 61 61 61 61 61 61 61 61 61 61 37 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 57 57 57 57 57 57 47 47 53 57 53 57 57 57 57 53 53 53 57 57 57 57 57 57 57 57 53 53 57 53 57 57 57 57 52 57 53 42 53 53 57 50 57 57 57 57 57 57 53 57 57 57 43 53 50 53 53 53 57 57 37 57 57 57 50 57 45 53 57 57 57 57 57 53 57 50 57 57 57 47 41 53 45 41 57 53 47 47 57 53 32 46 53 53 53 37 53 57 52 57 57 57 53 45 50 37 52 52 47 47 46 41 37 50 46 41 41 47 53 53 45 50 57 53 41 50 52 38 38 52 53 53 40 27 38 46 37 50 53 57 57 52 52 29 57 57 46 53 37 53 37 57 52 53 57 57 44 44 50 36 41 37 57 53 19 57 40 53 37 52 15 38 34 52 52 57 53 53 53 53 52 34 37 33 40 34 33 35 31 53 40 33 48 48 33 26 25 35 36 29 33 33 40 33 20 57 40 40 44 30 48 33 57 37 40 39 20 23 23 29 33 35 53 33 46 16 36 32 29 39 44 28 32 25 32 45 29 28 29 30 51 33 31 28 51 48 31 37 34 18 30 34 26 32 27 32 28 29 30 46 21 10 20 28 28 25 21 21 24 38 30 39 29 26 24 18 46 27 35 29 24 32 29 47 37 30 27 34 35 33 29 51 46 43 41 27 43 36 26 35 33 38 28 35 29 29 30 30 29 29 28 32 43 27 29 27 17 39 34 29 43 27 33 28 31 21 15 21 21 23 15 36 36 29 24 29 27 29 29 28 36 21 22 29 8 32 28 34 22 51 46 51 28 28 23 28 36 51 23 32 21 27 22 51 28 21 25 28 19 23 33 28 31 35 36 28 27 28 33 31 19 23 23 28 20 34 20 28 20 38 27 28 27 17 22 29 31 28 22 28 19 29 16 32 15 25 51 14 29 25 20 6 19 30 51 25 24 14 19 12 21 28 24 17 19 27 29 21 30 25 33 23 34 28 31 23 18 6 23 14 28 14 28 13 34 28 18 10 16 11 13 25 19 15 30 10 35 9 14 23 26 10 8 9 9 7 34 20 9 17 13 7 25 26 16 14 24 30 30 17 11 29 16 9 12 15 5 17 13 3 4 3 16 21 4 11 25 18 29 9 15 7 23 16 12 7 6 16 10 20 14 9 12 4 4 4 5 9 9 7 10 5 17 8 6 12 11 15 10 14 5 6 27 5 11 21 8 9 23 5 8 19 23 10 12 5 4 5 5 7 7 5 11 12 23 10 24 9 4 2 2 3 14 7 7 21 20 4 8 6 15 8 4 4 3 2 3 10 21 5 7 6 4 4 4 6 8 7 3 3 4 1 3 3 3 6 3 1 4 8 6 16 6 1 1 7 5 8 17 16 5 5 16 24 19 4 7 4 7 5 3 14 19 4 3 2 8 6 5 5 13 4 3 3 4 6 4 4 5 4 3 3 1 4 1 2 13 13 3 10 6 4 3 6 16 3 3 2 3 4 3 2 7 22 7 2 1 2	Open. Hide. 61 47 55 49 55 28 20 12 20 26 19 26 19 19 32 36 59 59 59 61 59 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 41 59 55 44 35 36 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 45 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 53 46 61 47 47 53 53 53 53 52 57 46 45 53 47 53 53 57 53 57 57 53 57 53 47 43 53 47 57 47 52 53 53 53 53 53 53 53 47 42 57 53 52 53 53 57 47 53 43 57 57 43 43 57 57 53 47 30 53 57 47 32 38 53 53 57 45 57 47 32 25 37 44 50 53 43 47 34 37 41 50 50 53 45 57 52 50 57 57 34 41 52 45 47 53 57 53 57 43 52 38 52 42 35 41 37 53 38 52 53 52 26 41 53 40 25 57 53 45 57 53 46 37 33 28 50 50 33 32 40 57 37 57 57 31 30 37 36 50 40 53 53 47 53 39 30 42 42 53 30 38 38 32 42 41 52 42 33 53 33 48 37 32 33 52 57 37 52 40 14 52 36 32 40 41 28 33 7 43 24 47 42 25 42 33 14 53 41 53 40 35 40 36 28 48 40 33 53 31 37 37 23 29 37 41 25 37 37 24 40 48 31 53 40 29 37 18 33 40 26 36 46 46 41 31 26 25 21 20 41 27 32 28 35 35 30 35 35 25 30 39 32 32 21 26 30 38 44 39 38 29 21 12 26 47 46 13 9 19 12 51 25 29 23 20 28 29 31 29 22 31 15 31 28 31 31 28 30 25 19 33 13 36 29 26 33 25 15 43 21 29 25 20 28 26 33 28 21 38 31 20 37 13 20 28 23 35 28 28 33 32 51 29 28 21 13 31 16 41 15 51 51 18 19 28 29 24 10 17 29 14 23 11 25 23 23 14 26 19 8 36 21 28 7 6 14 9 6 19 20 31 20 12 25 23 23 9 32 23 24 18 23 21 14 43 36 11 24 23 26 27 22 33 25 14 14 12 36 11 23 19 25 20 17 14 8 20 30 25 19 6 8 9 19 16 33 19 20 28 5 12 20 31 17 7 19 23 21 22 28 20 15 9 8 38 23 29 15 16 12 17 22 6 5 6 33 15 33 17 30 12 30 11 24 29 28 9 7 29 17 28 9 15 14 31 22 26 31 31 19 10 10 21 24 15 26 19 31 29 19 8 28 23 35 8 7 21 33 32 28 8 7 22 10 4 3 3 4 9 23 37 31 30 9 19 13 7 10 13 11 18 29 31 42 22 27 31 30 9 6 4 27 30 12 8 21 13 29 17 4 9 7 7 11 7 21 9 14 7 6 4 3 8 12 17 6 16 11 10 10 7 10 27 4 4 14 17 9 25 17 6 7 10 12 16 7 7 5 13 6 20 10 9 19 17 5 13 9 5 5 7 15 25 26 12 7 8 12 11 15 18 18 30 30 30 27 14 6 3 13 9 14 7 3 1 8 8 5 5 6 19 16 29 17

Alignment Information

BAC End 1

BAC End 2

seq1: chr18_43763718_43764836
seq2: B6Ng01-127K02.g_67_1153

seq1  GAATTCAGTGAAAGAAATGCAAGGAAGAAAAGCTACAAGCATATAATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAAAGAAATGCAAGGAAGAAAAGCTACAAGCATATAATCAG  50

seq1  CTGAAGCCAGGAATGAGGTGCTACTACAGCAGACTGGCATATCAGTACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCCAGGAATGAGGTGCTACTACAGCAGACTGGCATATCAGTACAA  100

seq1  GCTGAGATTAACACATTGTTCTGTAACCTGAAGTGGATACTAGAGGCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGATTAACACATTGTTCTGTAACCTGAAGTGGATACTAGAGGCAAT  150

seq1  TTCTCCACACAAAGTCATAGAGCTACATCCTGCTACAAACATGGCTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCACACAAAGTCATAGAGCTACATCCTGCTACAAACATGGCTTGCT  200

seq1  TGAATCAACTGAATAGAACTAAGCATTAAGCCTGTGCTGACCCCATCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCAACTGAATAGAACTAAGCATTAAGCCTGTGCTGACCCCATCTCA  250

seq1  GGAACTATAGTCAGGGTTCGACTAGACCAGCACTTAAATAGAGATGATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTATAGTCAGGGTTCGACTAGACCAGCACTTAAATAGAGATGATTT  300

seq1  TGGAATCCTTAAGAGACACTGTTTTCTATCAGCCTGCCTGTCTTTGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCCTTAAGAGACACTGTTTTCTATCAGCCTGCCTGTCTTTGTTTC  350

seq1  GTCATTTGTATGTTTCTTTTTTCCACCAGTTAATATTTTTTTAATTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTGTATGTTTCTTTTTTCCACCAGTTAATATTTTTTTAATTAAAA  400

seq1  CTTTTTCATATATTTGATTTTGATCACATTTTTCCCCTCCCCTTAACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCATATATTTGATTTTGATCACATTTTTCCCCTCCCCTTAACTTG  450

seq1  TCTCAGATCCTTCCCACTTCTCTACCCCCCTAGATACAACAGACATACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGATCCTTCCCACTTCTCTACCCCCCTAGATACAACAGACATACTC  500

seq1  CAGGACAGGTTCTATGCCAGGAATAGTTAGCCAACACAAAATGAATTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGGTTCTATGCCAGGAATAGTTAGCCAACACAAAATGAATTCTG  550

seq1  TGGGTTGAAGAAAGCCTGCCATTCTTAAAGAAGCCACTCTGTGTCTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGAAGAAAGCCTGCCATTCTTAAAGAAGCCACTCTGTGTCTTCTC  600

seq1  ATGACCCTAAACTTTCCCTCCACCTTTTACATCCCTGCATCCAGCATCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCCTAAACTTTCCCTCCACCTTTTACATCCCTGCATCCAGCATCTC  650

seq1  TGTTGCTTTTGGCCAGAAGAGGTGAGGATTCCTTGAGCCTGTCCATGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTTTTGGCCAGAAGAGGTGAGGATTCCTTGAGCCTGTCCATGACT  700

seq1  CTTCTTTGATTGCTGGGCACAGAGGCTCATAGCAGATATTCAAACGCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTTCTTTGATTGCTGGGCACAGAGGCTCATAGCAGATATTCAAACGC-AA  749

seq1  AGGTTTGTTGAACAAGACAGTGCTGTTGGAAGAACAGTGAATTCTGTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGTTGAACAAGACAGTGCTGTTGGAAGAACAGTGAATTCTGTCAG  799

seq1  CAGTCCCAGTGTCCTTTCTCAGTGCCATGGCTGTTCTAGGAGAGGGCACA  850
      ||||||||||||| |||||||||||||||||||||||||   ||||||||
seq2  CAGTCCCAGTGTCTTTTCTCAGTGCCATGGCTGTTCTAGAGAAGGGCACA  849

seq1  GGGCGCGTTTATGCTTGGCAGAGGCTTGTTATC-TTCTCATTCAACATTG  899
      |||||||||||||||||||||||||||| |||| ||||||||| ||||||
seq2  GGGCGCGTTTATGCTTGGCAGAGGCTTG-TATCTTTCTCATTC-ACATTG  897

seq1  TAATGGACTAATAGCAT-GAGAGGTCCAAGAAAAGTAAGCACACTATTCT  948
      ||||||||| ||||||| ||||||||||   ||||| |||||||||||||
seq2  TAATGGACTTATAGCATGGAGAGGTCCA--GAAAGT-AGCACACTATTCT  944

seq1  CAAATGTTAGCAATCCGTATTTAAGAAATACACTTTTTCCTTCAGTATTT  998
      | ||||||||||   |||| ||||| |||||||||||||  |||||||||
seq2  C-AATGTTAGCA--TCGTA-TTAAG-AATACACTTTTTC--TCAGTATTT  987

seq1  TCTTTGATTTATTACCTTCTGGAACAGAAACCTGGAAGCACACTTCTTCC  1048
      || ||||||||||| ||||| | |||||   || ||  ||||| ||||| 
seq2  TC-TTGATTTATTA-CTTCTTGGACAGA---CTTGAGCCACAC-TCTTC-  1030

seq1  TTTTAGGATTTAATCCATCTCTCCAGACAGCTTTGTTGGGGAAAAAAAAA  1098
       |||| ||||  || |||| ||| | || |||||||||||      ||||
seq2  -TTTA-GATT--ATTCATC-CTCGA-ACGGCTTTGTTGGG------AAAA  1068

seq1  AAGGAAACCTCAGGACTGTTT  1119
      |||  |||||||| |||||||
seq2  AAG--AACCTCAGAACTGTTT  1087

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information