BAC Information

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BAC

Clone NameB6Ng01-128E12
Chromosome18 (Build37)
Map Location 59,709,939 - 59,815,350
singlet/doubletdoublet
Overlap genenone
Upstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik, 4833446K15Rik
Downstream geneLOC667549, EG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1, EG629292, LOC667597, 2010002N04Rik, Dctn4, Rbm22, Myoz3, Synpo, LOC100042675
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128E12.bB6Ng01-128E12.g
ACCDH930173DH930174
length1,049696
definitionDH930173|Mus musculus domesticus DNA, BAC clone: B6Ng01-128E12, 5' end.DH930174|Mus musculus domesticus DNA, BAC clone: B6Ng01-128E12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,814,215 - 59,815,350)(59,709,939 - 59,710,633)
sequence
gaattccaaagacataggctctaatgctaatgaaggaatgggactgctag
aaaggcaaagtcaaacaggcaaacagaatggctttcttcttccacattct
taaaataggccagcagaatttgtggctcagattataggagtgtcttccta
tctcaaaatctggattaaaggtgtgtcttttcacaaattaaaaaaaacaa
aaaacaaaaaaaaacaaacaaaaaaaacccaactgggttaaagacatgtt
ttcccttctcaaaaactccatattcgaaatggattttcctacttcaattt
aaacaaaacttcatcaaaggtataccctcctgttttaaaatttagttaat
tccagaagtaatcaagttgacaaccaaaaataaccatcacagatatcttt
taagaggtcaaacggtattgactctaacagtcttaaggatatggattttg
gcacattacacaacactcttccaatagaaatttgttatctgagccttaac
agctgtaagagttcagagaccaatttcaaactagaatttgacagttagtt
atgtgcaccgcgacacttcttcagatgatgtggaagaaactcggggctca
agaacctgaaatcaatttacaggtgattcacactagttacaggttctgaa
gaaatctctttccaaaataaggaaagaatttcacttgtctcatactgtga
catagaacaacacaaaggagaattgagccctttagccaaagacaggcaaa
cagatggtatacataattttttagacactcactcatgattgctaattggc
tataaaaaggcacctttgactctggccagggaaagcaggaggttaactgc
agatcttcacttcttcctcctctccttcaaatccaatccagagcctcacc
caagctctgttgaaaatcacctgctccctctctgccctcatctccagcga
aaatagattggaccagaaaacacatggatgaagatcccagacagcaatca
agagggaaaccatcacacaccaccacacacctacacacacacaccaaca
gaattctcttccctccccatcttctctagtaattgtcattgttcgtattc
tcgataatagacattgttcctggagtggggtggggttatcttattgtagt
ttaatttgcatttcccttgcttttagtgatgatgaacattttttcgtata
cctgttgattatttctttatgttttctctttgaaggaagaaagtgtatct
attgcttagatttatatattaatttcctcctatgtgctgaatgtttattg
taacactaaccagaaaaccaaaaattagataagcatacatataacaaaac
ctagattaaaaacatatgtgtattattccaggactgaccatttggtattg
gataactgactaagcagctcattccagtggaagactatttctcctgctct
cattattccttagttgcctgtagctcttagtttaatattggggccttatg
agatttttcttctcccatattaacatgctggtcagtgttgtccgagtgca
gatagaccttctttactcactcatattgttgatgtgacattgctgaagct
catgtctattctcagcgataccttatcacagcagagttcctggtcctctg
gttctttaaatcttttccaccccctgtttggcaatatttcctgagctcta
ggtacagagttgtattacccaatatattcattgggggctggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59814215_59815350
seq2: B6Ng01-128E12.b_46_1094 (reverse)

seq1  TGTTGGTGGTGGTGGTTGTAGTGTGTGTGTAGAGTGTTAGGAGGTTCATA  50
                                                        
seq2  --------------------------------------------------  0

seq1  TATGTACTGCCCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100
                                   |||  ||||||||||||  ||
seq2  -----------------------------TGTTGGTGTGTGTGTGTAGGT  21

seq1  GTGTGTGTGTGTGTGTG-TGTTTTCCCCTCTTTTGATTTGCTGGTCTGGG  149
      ||||| ||| ||||||| || |||||   || |||| ||||| |||||||
seq2  GTGTG-GTG-GTGTGTGATGGTTTCC---CTCTTGA-TTGCT-GTCTGGG  64

seq1  ATCTTTCATTCCATGTGTTTTCTGGTCCAATCTATTTTCGCTGGAGATGA  199
      ||| |||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATC-TTCA-TCCATGTGTTTTCTGGTCCAATCTATTTTCGCTGGAGATGA  112

seq1  GGGCAGAGAGGGAGCAGGTGATTTTCAACAGAGCTTGGGTGAGGCTCTGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAGAGGGAGCAGGTGATTTTCAACAGAGCTTGGGTGAGGCTCTGG  162

seq1  ATTGGATTTGAAGGAGAGGAGGAAGAAGTGAAGATCTGCAGTTAACCTCC  299
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATTGGATTTGAAGGAGAGGAGGAAGAAGTGAAGATCTGCAGTTAACCT-C  211

seq1  CTGC-TTCCCTGGCCAGAGTCAAAGGTGCCTTTTTATAGCCAATTAGCAA  348
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTCCCTGGCCAGAGTCAAAGGTGCCTTTTTATAGCCAATTAGCAA  261

seq1  TCCTGAGTGAGTGTCTAAAAAATTATGTATACCATCTGTTTGCCTGTCTT  398
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGTGAGTGTCTAAAAAATTATGTATACCATCTGTTTGCCTGTCTT  311

seq1  TGGCTAAAGGGCTCAATTCTCCTTTGTGTTGTTCTATGTCACAGTATGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAAAGGGCTCAATTCTCCTTTGTGTTGTTCTATGTCACAGTATGAG  361

seq1  ACAAGTGAAATTCTTTCCTTATTTTGGAAAGAGATTTCTTCAGAACCTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGAAATTCTTTCCTTATTTTGGAAAGAGATTTCTTCAGAACCTGT  411

seq1  AACTAGTGTGAATCACCTGTAAATTGATTTCAGGTTCTTGAGCCCCGAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGTGTGAATCACCTGTAAATTGATTTCAGGTTCTTGAGCCCCGAGT  461

seq1  TTCTTCCACATCATCTGAAGAAGTGTCGCGGTGCACATAACTAACTGTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCACATCATCTGAAGAAGTGTCGCGGTGCACATAACTAACTGTCA  511

seq1  AATTCTAGTTTGAAATTGGTCTCTGAACTCTTACAGCTGTTAAGGCTCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAGTTTGAAATTGGTCTCTGAACTCTTACAGCTGTTAAGGCTCAG  561

seq1  ATAACAAATTTCTATTGGAAGAGTGTTGTGTAATGTGCCAAAATCCATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAATTTCTATTGGAAGAGTGTTGTGTAATGTGCCAAAATCCATAT  611

seq1  CCTTAAGACTGTTAGAGTCAATACCGTTTGACCTCTTAAAAGATATCTGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAGACTGTTAGAGTCAATACCGTTTGACCTCTTAAAAGATATCTGT  661

seq1  GATGGTTATTTTTGGTTGTCAACTTGATTACTTCTGGAATTAACTAAATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTATTTTTGGTTGTCAACTTGATTACTTCTGGAATTAACTAAATT  711

seq1  TTAAAACAGGAGGGTATACCTTTGATGAAGTTTTGTTTAAATTGAAGTAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACAGGAGGGTATACCTTTGATGAAGTTTTGTTTAAATTGAAGTAG  761

seq1  GAAAATCCATTTCGAATATGGAGTTTTTGAGAAGGGAAAACATGTCTTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCCATTTCGAATATGGAGTTTTTGAGAAGGGAAAACATGTCTTTA  811

seq1  ACCCAGTTGGGTTTTTTTTGTTTGTTTTTTTTTGTTTTTTGTTTTTTTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTTGGGTTTTTTTTGTTTGTTTTTTTTTGTTTTTTGTTTTTTTTA  861

seq1  ATTTGTGAAAAGACACACCTTTAATCCAGATTTTGAGATAGGAAGACACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGAAAAGACACACCTTTAATCCAGATTTTGAGATAGGAAGACACT  911

seq1  CCTATAATCTGAGCCACAAATTCTGCTGGCCTATTTTAAGAATGTGGAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAATCTGAGCCACAAATTCTGCTGGCCTATTTTAAGAATGTGGAAG  961

seq1  AAGAAAGCCATTCTGTTTGCCTGTTTGACTTTGCCTTTCTAGCAGTCCCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCCATTCTGTTTGCCTGTTTGACTTTGCCTTTCTAGCAGTCCCA  1011

seq1  TTCCTTCATTAGCATTAGAGCCTATGTCTTTGGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCATTAGCATTAGAGCCTATGTCTTTGGAATTC  1049

seq1: chr18_59709939_59710633
seq2: B6Ng01-128E12.g_70_765

seq1  GAATTCTCTTCCCTCCCCATCTTCTCTAGTAATTGTCATTGTTCGTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCCCTCCCCATCTTCTCTAGTAATTGTCATTGTTCGTATTC  50

seq1  TCGATAATAGACATTGTTCCTGGAGTGGGGTGGGGTTATCTTATTGTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATAATAGACATTGTTCCTGGAGTGGGGTGGGGTTATCTTATTGTAGT  100

seq1  TTAATTTGCATTTCCCTTGCTTTTAGTGATGATGAACATTTTTTCGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTGCATTTCCCTTGCTTTTAGTGATGATGAACATTTTTTCGTATA  150

seq1  CCTGTTGATTATTTCTTTATGTTTTCTCTTTGAAGGAAGAAAGTGTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGATTATTTCTTTATGTTTTCTCTTTGAAGGAAGAAAGTGTATCT  200

seq1  ATTGCTTAGATTTATATATTAATTTCCTCCTATGTGCTGAATGTTTATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTAGATTTATATATTAATTTCCTCCTATGTGCTGAATGTTTATTG  250

seq1  TAACACTAACCAGAAAACCAAAAATTAGATAAGCATACATATAACAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTAACCAGAAAACCAAAAATTAGATAAGCATACATATAACAAAAC  300

seq1  CTAGATTAAAAACATATGTGTATTATTCCAGGACTGACCATTTGGTATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTAAAAACATATGTGTATTATTCCAGGACTGACCATTTGGTATTG  350

seq1  GATAACTGACTAAGCAGCTCATTCCAGTGGAAGACTATTTCTCCTGCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACTGACTAAGCAGCTCATTCCAGTGGAAGACTATTTCTCCTGCTCT  400

seq1  CATTATTCCTTAGTTGCCTGTAGCTCTTAGTTTAATATTGGGGCCTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTCCTTAGTTGCCTGTAGCTCTTAGTTTAATATTGGGGCCTTATG  450

seq1  AGATTTTTCTTCTCCCATATTAACATGCTGGTCAGTGTTGTCCGAGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTCTTCTCCCATATTAACATGCTGGTCAGTGTTGTCCGAGTGCA  500

seq1  GATAGACCTTCTTTACTCACTCATATTGTTGATGTGACATTGCTGAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGACCTTCTTTACTCACTCATATTGTTGATGTGACATTGCTGAAGCT  550

seq1  CATGTCTATTCTCAGCGATACCTTATCACAGCAGAGTTCCTGGTCCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTATTCTCAGCGATACCTTATCACAGCAGAGTTCCTGGTCCTCTG  600

seq1  GTTCTTTAAATC-TTTCCACCCCCTGTTTGGCAATATTTCCTGAGCTCTA  649
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTAAATCTTTTCCACCCCCTGTTTGGCAATATTTCCTGAGCTCTA  650

seq1  GGTACAAGAGTTGTATTACCCAATATATTCATT-GTGGCTGGTGGGG  695
      ||||| ||||||||||||||||||||||||||| | |||||||||||
seq2  GGTAC-AGAGTTGTATTACCCAATATATTCATTGGGGGCTGGTGGGG  696