BAC Information

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BAC

Clone NameB6Ng01-128J10
Chromosome18 (Build37)
Map Location 7,694,308 - 7,833,881
singlet/doubletdoublet
Overlap geneLOC100039606
Upstream geneEG665053, Rab18, LOC620787, LOC100039635, Mkx, LOC664778, Armc4, Mpp7, EG622384, LOC100039562
Downstream geneWac, LOC665121, LOC225134, LOC665132, EG433158, EG545242
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128J10.bB6Ng01-128J10.g
ACCDH930399DH930400
length1,1261,102
definitionDH930399|Mus musculus domesticus DNA, BAC clone: B6Ng01-128J10, 5' end.DH930400|Mus musculus domesticus DNA, BAC clone: B6Ng01-128J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,694,308 - 7,695,446)(7,832,801 - 7,833,881)
sequence
gaattctacctcacactgtccaaagtggggaccacagtgaaatcaaacaa
gccatactgaggaggatgttggtggctggactttggggtgatggcagaca
cgtatgtacacactgttaatggggacatgaatatgggaagccagtatgga
tagcagtatggaggctcctcaaaaaccaaaaatagaagcaacacatgagc
cagctgtagcatgctgggaatggactgagaagaatgcaagttagtgtgcc
acatgaacagcaaggttattgtggtatccttcatgatcaagatgtggagc
cagcaatgccatcagtagatgcataaaaaatgccacatatatgcacgtca
tatatattctgtatattgtatttctccctttcctccccacccccaacccc
agctttttctcacccattcatggcattatcctggaacagtggaggacaga
aaaaggaggcagacttctgaaagtttacagctaactactaatggcttgca
cattacagaggaccattgccaccaagcagtgttataatggaaactctctt
gggacataaacactatgccgctgtcaatccccagagactgcaataaatgc
aaaagtgcgtgctcaggtgtctcttgtccatttcttttctaggcagttca
caggagttatccttcaaagaatcaaacttcttgccaaaccatctttcagc
caaaattcattttcctctagttaacaggaaaagggagaagacgaaattcc
aagtctctgtgtgggtatgcgagtgtaagcacagtacatgaagaggctag
aagatgacataacccttggagctggaggtttgtgcttgtgaacctccagc
catggatcctaggaacagagatctgatcctctggaagagcagtaagtacg
cctaaacacggagtcatctttcctgcggtaagcacccatgtcaaaggtac
aagaacaactttatcttcagaaaagaaattggagtcattcttaaagggta
cccagaccctgtcaagaaggactgctgcagaagctcagaaacacaggaat
tgtagcagcaataaaaattatcagcctgtaagagactaagatggactttc
ccaacatcatatgggagtttgaaagg

gaattcacataagcatcccccaaaacacaaaaattgtctttaaaaacacc
tatcactgtgcctacttatctatccctttgaactcctagtcttatccaca
gtgataacttttttcctgtttcctagagaagactgaaacaatcaaaagag
acctgatgtttatatccaaccttatcagcatctgagctctcacagtgctt
tccagcacactgataacatgtatgactaggcaggctctttgtgtccttat
ctaaagtcagaggctaacgctgcaagctttagcttgggagccagatactg
gtcattgtgttttatggctaagaatgattttcatgggctggagagatagc
tcagtggttaagagcactgtctgcttttccagaggtcctgagttcaaatc
ccagcaaccacatggtggctcacaaccatctgtaatgtgatctgatgtcc
tcttctcctgtgtctgaaaacagctacagtgtgctcatatttaataaata
aataaaacttaaaaaacagacaaaaataattttcataattttaaattgtt
gggtggaaaaatatgcaacagagatgggatggagctcacaaattttataa
cactgtctggccctttacagaaaaacagaagaaaacaaacaacagcaaaa
tcactgctgattcccatcccagattgtaaatgtaaatgtagctttttatt
ttcctgagatgaagtgatgagatgagacccataccttaagttttacaaat
gcacagcttggactgagctagagcagtttttctctgttctaactatccct
aggcctggcctcaaagcttctagcctccatacaatctaatcttccaaact
gactaatataatcaggtttctcttggcctctgactggattgctctgttga
cctcatattaatttggcaatatgtctaatttctggttccttctcattttt
gactcactatgttttcacttgtatctagattgtctcttttgcaacctgtc
tttgtaactgtcctgtaaaactgcctcctatctatttctctgttgtgctc
tcttaaggtcactttctagcatatcctatctctgactcattccgtcaatc
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_7694308_7695446
seq2: B6Ng01-128J10.b_49_1174

seq1  GAATTCTACCTCACACTGTCCAAAGTGGGGACCACAGTGAAATCAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCTCACACTGTCCAAAGTGGGGACCACAGTGAAATCAAACAA  50

seq1  GCCATACTGAGGAGGATGTTGGTGGCTGGACTTTGGGGTGATGGCAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATACTGAGGAGGATGTTGGTGGCTGGACTTTGGGGTGATGGCAGACA  100

seq1  CGTATGTACACACTGTTAATGGGGACATGAATATGGGAAGCCAGTATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATGTACACACTGTTAATGGGGACATGAATATGGGAAGCCAGTATGGA  150

seq1  TAGCAGTATGGAGGCTCCTCAAAAACCAAAAATAGAAGCAACACATGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTATGGAGGCTCCTCAAAAACCAAAAATAGAAGCAACACATGAGC  200

seq1  CAGCTGTAGCATGCTGGGAATGGACTGAGAAGAATGCAAGTTAGTGTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTAGCATGCTGGGAATGGACTGAGAAGAATGCAAGTTAGTGTGCC  250

seq1  ACATGAACAGCAAGGTTATTGTGGTATCCTTCATGATCAAGATGTGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAACAGCAAGGTTATTGTGGTATCCTTCATGATCAAGATGTGGAGC  300

seq1  CAGCAATGCCATCAGTAGATGCATAAAAAATGCCACATATATGCACGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATGCCATCAGTAGATGCATAAAAAATGCCACATATATGCACGTCA  350

seq1  TATATATTCTGTATATTGTATTTCTCCCTTTCCTCCCCACCCCCAACCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTCTGTATATTGTATTTCTCCCTTTCCTCCCCACCCCCAACCCC  400

seq1  AGCTTTTTCTCACCCATTCATGGCATTATCCTGGAACAGTGGAGGACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTTCTCACCCATTCATGGCATTATCCTGGAACAGTGGAGGACAGA  450

seq1  AAAAGGAGGCAGACTTCTGAAAGTTTACAGCTAACTACTAATGGCTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGGCAGACTTCTGAAAGTTTACAGCTAACTACTAATGGCTTGCA  500

seq1  CATTACAGAGGACCATTGCCACCAAGCAGTGTTATAATGGAAACTCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAGAGGACCATTGCCACCAAGCAGTGTTATAATGGAAACTCTCTT  550

seq1  GGGACATAAACACTATGCCGCTGTCAATCCCCAGAGACTGCAATAAATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATAAACACTATGCCGCTGTCAATCCCCAGAGACTGCAATAAATGC  600

seq1  AAAAGTGCGTGCTCAGGTGTCTCTTGTCCATTTCTTTTCTAGGCAGTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGCGTGCTCAGGTGTCTCTTGTCCATTTCTTTTCTAGGCAGTTCA  650

seq1  CAGGAGTTATCCTTCAAAGAATCAAACTTCTTGCCAAACCATCTTTCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTTATCCTTCAAAGAATCAAACTTCTTGCCAAACCATCTTTCAGC  700

seq1  CAAAATTCATTTTCCTCTAGTTAACAGGAAAAGGGAGAAGACGAAATTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTCATTTTCCTCTAGTTAACAGGAAAAGGGAGAAGACGAAATTCC  750

seq1  AAGTCTCTGTGTGGGTATGCGAGTGTAAGCACAGTACATGAAGAGGCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTGTGTGGGTATGCGAGTGTAAGCACAGTACATGAAGAGGCTAG  800

seq1  AAGATGACATAACCCTTGGAGCTGGAGGTTTTGTGCTTGTGAACCTCCAG  850
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAGATGACATAACCCTTGGAGCTGGAGG-TTTGTGCTTGTGAACCTCCAG  849

seq1  CCATGGATCCTAGGAACAGAGATCTGATCCTCTGGAAGAGCAGTAAGTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGATCCTAGGAACAGAGATCTGATCCTCTGGAAGAGCAGTAAGTAC  899

seq1  GCCTAAACACGGAGCCATC-TTCCTGCGGTAAGCACCCATGTCAAAGGTA  949
      |||||||||||||| |||| ||||||||||||||||||||||||||||||
seq2  GCCTAAACACGGAGTCATCTTTCCTGCGGTAAGCACCCATGTCAAAGGTA  949

seq1  CCAGAACAACTTTAACTTCAGAAAAGAAATAGGAGTCATTC-TAAAGGGT  998
      | |||||||||||| ||||||||||||||| |||||||||| ||||||||
seq2  CAAGAACAACTTTATCTTCAGAAAAGAAATTGGAGTCATTCTTAAAGGGT  999

seq1  ACCCAGACCCTGTCCAAAGAGGAACTGCTGCAGGAAGCTCAGAAACACAG  1048
      ||||||||||||||  |||| | ||||||||| |||||||||||||||||
seq2  ACCCAGACCCTGTC--AAGAAGGACTGCTGCA-GAAGCTCAGAAACACAG  1046

seq1  GAATTGTAGCCAGCAAATAAAAAATTATTCAGGCCTGTAAGAGGACTAAG  1098
      ||||||||| ||||||   |||||||| ||| |||||||||| |||||||
seq2  GAATTGTAG-CAGCAA--TAAAAATTA-TCA-GCCTGTAAGA-GACTAAG  1090

seq1  AGTGACTTTCCCCCAAACATTCATATGGGAGTCTTGAAAGG  1139
      |  |||||||||   |||| |||||||||||| ||||||||
seq2  ATGGACTTTCCC---AACA-TCATATGGGAGT-TTGAAAGG  1126


seq1: chr18_7832801_7833881
seq2: B6Ng01-128J10.g_97_1170 (reverse)

seq1  AAGATTTGACAGAATGAGTCAGAGATAGGATATGCCTTAGAAAGGTGA-C  49
      |||| ||||| ||||||||||||||||||||||||  |||||| |||| |
seq2  AAGA-TTGACGGAATGAGTCAGAGATAGGATATGC--TAGAAA-GTGACC  46

seq1  TTAAGGGAGCACAACAGAGAAATAGATAGGAGGCAGTTTTACAGGGACAG  99
      ||||| ||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTAAGAGAGCACAACAGAGAAATAGATAGGAGGCAGTTTTACA-GGACAG  95

seq1  TTACAGAGACAGGTTGCAGAGAGA-ACAAACTAGATACAGGTGAAAACAT  148
      ||||| |||||||||||| | ||| |||| ||||||||| ||||||||||
seq2  TTACAAAGACAGGTTGCA-AAAGAGACAATCTAGATACAAGTGAAAACAT  144

seq1  AGTGAGTCAGAAAATGAGAAGGAACCAGAAAATTAGAACATATTGCCAAA  198
      ||||||||| |||||||||||||||||| ||||||| |||||||||||||
seq2  AGTGAGTCA-AAAATGAGAAGGAACCAG-AAATTAG-ACATATTGCCAAA  191

seq1  GTTAATATGAGGTCAAACAGAGCAATCCAGTCAGAGGCCAAGAGAAACCT  248
       ||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  -TTAATATGAGGTC-AACAGAGCAATCCAGTCAGAGGCCAAGAGAAACCT  239

seq1  GATTATATTAGTCAGTTTGGAAGATTAGATTGTATGGAGGCTAGAAGCTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATATTAGTCAGTTTGGAAGATTAGATTGTATGGAGGCTAGAAGCTT  289

seq1  TGAGGCCTAGGCCTAGGGATAGTTAGAACAGAGAAAAACTGCTCTAGCTC  348
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCC-AGGCCTAGGGATAGTTAGAACAGAGAAAAACTGCTCTAGCTC  338

seq1  AGTCCAAGCTGTGCATTTGTAAAACTT-AGGTATGGGTCTCATCTCATCA  397
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGTCCAAGCTGTGCATTTGTAAAACTTAAGGTATGGGTCTCATCTCATCA  388

seq1  CTTCATCTCAGGAAA--TAAAAGCTACATTTACATTTACAATCTGGGATG  445
      |||||||||||||||   ||||||||||||||||||||||||||||||||
seq2  CTTCATCTCAGGAAAATAAAAAGCTACATTTACATTTACAATCTGGGATG  438

seq1  GGAATCAGCAGTGATTTTGCTGTTGTTTGTTTTCTTCTGTTTTTCTGTAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCAGCAGTGATTTTGCTGTTGTTTGTTTTCTTCTGTTTTTCTGTAA  488

seq1  AGGGCCAGACAGTGTTATAAAATTTGTGAGCTCCATCCCATCTCTGTTGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCAGACAGTGTTATAAAATTTGTGAGCTCCATCCCATCTCTGTTGC  538

seq1  ATATTTTTCCACCCAACAATTTAAAATTATGAAAATTATTTTTGTCTGTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTCCACCCAACAATTTAAAATTATGAAAATTATTTTTGTCTGTT  588

seq1  TTTTAAGTTTTATTTATTTATTAAATATGAGCACACTGTAGCTGTTTTCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTTTTATTTATTTATTAAATATGAGCACACTGTAGCTGTTTTCA  638

seq1  GACACAGGAGAAGAGGACATCAGATCACATTACAGATGGTTGTGAGCCAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGGAGAAGAGGACATCAGATCACATTACAGATGGTTGTGAGCCAC  688

seq1  CATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAAAGCAGACAGTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAAAGCAGACAGTG  738

seq1  CTCTTAACCACTGAGCTATCTCTCCAGCCCATGAAAATCATTCTTAGCCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAACCACTGAGCTATCTCTCCAGCCCATGAAAATCATTCTTAGCCA  788

seq1  TAAAACACAATGACCAGTATCTGGCTCCCAAGCTAAAGCTTGCAGCGTTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACACAATGACCAGTATCTGGCTCCCAAGCTAAAGCTTGCAGCGTTA  838

seq1  GCCTCTGACTTTAGATAAGGACACAAAGAGCCTGCCTAGTCATACATGTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGACTTTAGATAAGGACACAAAGAGCCTGCCTAGTCATACATGTT  888

seq1  ATCAGTGTGCTGGAAAGCACTGTGAGAGCTCAGATGCTGATAAGGTTGGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGTGCTGGAAAGCACTGTGAGAGCTCAGATGCTGATAAGGTTGGA  938

seq1  TATAAACATCAGGTCTCTTTTGATTGTTTCAGTCTTCTCTAGGAAACAGG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACATCAGGTCTCTTTTGATTGTTTCAGTCTTCTCTAGGAAACAGG  988

seq1  AAAAAAGTTATCACTGTGGATAAGACTAGGAGTTCAAAGGGATAGATAAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTTATCACTGTGGATAAGACTAGGAGTTCAAAGGGATAGATAAG  1038

seq1  TAGGCACAGTGATAGGTGTTTTTAAAGACAATTTTT  1081
      ||||||||||||||||||||||||||||||||||||
seq2  TAGGCACAGTGATAGGTGTTTTTAAAGACAATTTTT  1074


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