BAC Information

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BAC

Clone NameB6Ng01-130P16
Chromosome18 (Build37)Y (Build37)
Map Location 60,058,920 - 60,059,2411,544,825 - 1,544,924
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAdamts19, A730017C20Rik, 4833446K15Rik, LOC667549
Downstream geneEG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1, EG629292, LOC667597, 2010002N04Rik, Dctn4, Rbm22, Myoz3, Synpo, LOC100042675, Ndst1, Rps14, LOC667619, Cd74, Tcof1, LOC100042699
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130P16.bB6Ng01-130P16.g
ACCDH932156DH932157
length973471
definitionDH932156|Mus musculus domesticus DNA, BAC clone: B6Ng01-130P16, 5' end.DH932157|Mus musculus domesticus DNA, BAC clone: B6Ng01-130P16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(60,058,920 - 60,059,241)(1,544,825 - 1,544,924)
sequence
gaattcatgatgatcctgttcagttataattccatcttaacacatcttac
tactgcatcattttattttttgtttttgctttttattagatattttcttt
atttacatttcaaatgttatcccctttcctgattttctcctctgaaaacc
ccctcttgctatgacctcccccctacccctgctcaccaacccacccactc
ctgctacgtggccccaacattcacctacaatggggcatagagccttcaca
ggaccaagggtctctcctcccattgatgaccagctaggccatcctctgct
acatatgcagctggagccaatagtcccaccatgagtactccttgactggt
ggtttagtccccaggagctctgcaggtactggatagttcatattgctgtt
cctcctatgaggctgcaaaccccttcaactccttgggccctttctctggc
tgctacattggggaccctgtgctcagtcccatcaatggctgtaagcattc
acttctgtatttgtcaggcactggcagagtctctcaggagacagctatat
caggctcctgtcagcaagcacttgttggcatccacaatagtgcctgggtt
tggtgattgtatataggatggatccccaggtagtgcagtctctgaatggt
cattctttcagtctctgcttcaagttttgtctctgtaacaccttccatgg
gtgttttgttccccctttaaagaaggatcgaagtatgcacactttggtct
tccttctttttgagtttcatgtggtttgtgaattgtatattgggtattcc
cagcttctgggctaatatccacttatctgtgagtgcatatcatgtgtgtg
attttgtaattgggttacctcactcaggatgacatcctccagatccatcc
atctgcctaagaatttcataattcattgtttttatagctcagtagtactc
cattgtgtaaatgtaccacattt
gaattctacccagaatctgtctggtcctggattctttttcttttttcttt
ttctctctctttctctctttctttctttctttctttctttctttctttct
ttctttctttctttctttctttctttctttctttctctctctctctctct
ctctctctctttctttctctctctctttctttctctctctctctctttct
ttctttctttctttctttctattttggttgagagacttttaattactgct
tttatttcactaggagttaatatgatcttgatttaactttagtaggtggt
atacattgagaaagttatccatttcttctatattttctcatttggtagag
tacaggtttctaaagcacgcccttataatatttcagatctcttctgtgcc
tattgttatgttctccttttatttctgattttgttaattggatatcctct
ctctacctttattgaattggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_60058920_60059241
seq2: B6Ng01-130P16.b_50_371

seq1  GAATTCATGATGATCCTGTTCAGTTATAATTCCATCTTAACACATCTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGATGATCCTGTTCAGTTATAATTCCATCTTAACACATCTTAC  50

seq1  TACTGCATCATTTTATTTTTTGTTTTTGCTTTTTATTAGATATTTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCATCATTTTATTTTTTGTTTTTGCTTTTTATTAGATATTTTCTTT  100

seq1  ATTTACATTTCAAATGTTATCCCCTTTCCTGATTTTCTCCTCTGAAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATTTCAAATGTTATCCCCTTTCCTGATTTTCTCCTCTGAAAACC  150

seq1  CCCTCTTGCTATGACCTCCCCCCTACCCCTGCTCACCAACCCACCCACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTGCTATGACCTCCCCCCTACCCCTGCTCACCAACCCACCCACTC  200

seq1  CTGCTACGTGGCCCCAACATTCACCTACAATGGGGCATAGAGCCTTCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTACGTGGCCCCAACATTCACCTACAATGGGGCATAGAGCCTTCACA  250

seq1  GGACCAAGGGTCTCTCCTCCCATTGATGACCAGCTAGGCCATCCTCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAAGGGTCTCTCCTCCCATTGATGACCAGCTAGGCCATCCTCTGCT  300

seq1  ACATATGCAGCTGGAGCCAATA  322
      ||||||||||||||||||||||
seq2  ACATATGCAGCTGGAGCCAATA  322

seq1: chrY_1544825_1544924
seq2: B6Ng01-130P16.g_119_244 (reverse)

seq1  ----------------AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  34
                      |||||||||||||||||||||||||||| ||| |
seq2  AAGAGAGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAA  50

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAAAG----------AGAGAGAGAGA  74
      || ||| ||| ||| ||| ||| ||||||          ||| ||| |||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  100

seq1  AAGAGAGAGAAAGAGAAAGAGAGAGA  100
      |||| ||| | |||||||||||||||
seq2  AAGAAAGAAAGAGAGAAAGAGAGAGA  126