BAC Information

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BAC

Clone NameB6Ng01-131O10
Chromosome18 (Build37)
Map Location 63,438,770 - 63,439,604
singlet/doubletsinglet
Overlap gene9030411M15Rik
Upstream geneHtr4, Fbxo38, Spink10, EG408198, 2700046A07Rik, Apcdd1, Napg, 9430028L06Rik
Downstream geneLOC627792, Txnl1, Wdr7, LOC629436, LOC667773, St8sia3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131O10.bB6Ng01-131O10.g
ACCDH932842DH932843
length1,175835
definitionDH932842|Mus musculus domesticus DNA, BAC clone: B6Ng01-131O10, 5' end.DH932843|Mus musculus domesticus DNA, BAC clone: B6Ng01-131O10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgccccctccttagaagtggga
acaaatcacccatggaaggagttacagaaacaaagtatggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcttccaaatgctgacaccattgcatacactagcaagattttactgaa
aggacccagatgtagctgtctcttgtgagaatatgccggggcctagcaaa
cacagaagtggatgctccagtcagctaatggatggatcatcagggctctc
aatggaggagctagagaaagtatccaaggagctaagggaatcttcaacct
ctataggtgaacaacattatgaactatccagtacccctggagctcttgac
tctgtggcattgttatcaaagaatggcctagtcggccaccctggaaagag
aggcccttggaatggcaacttgtggccccggatacgggaacgcccaggcc
aaaggggggcagatgggtggggtta
gaattcactttgtggccaggctggctaagaactcatgaagatctgtctgc
tactgcctcccaagaggcattaaaggcatgtgccactttgcccagttttc
attatgtgctcttaattaatgaaagcatccagctgaggtcttccggaagg
agtctgttccttgtagacatcatgggcccagtaccctgtctgtgtcacac
ctgcactcacaggacaagtgggaaagcacacgttttccgttctgtgttca
gtgaggcattgcatgtgatgtatgtgaacacctgtgatgccttagacagc
atactcaacaatgagagagccatgggtgtgaaaatggagacttcccagcc
tccgggaacctccatttttctaacactatttaatgaaaaaacacttcgaa
agaatggaccatcatctagtgattgccatatgcagggatccatcccataa
tcagctcccaaacgctgacaccattgcatacactagcaagattttgctga
aaggacccagatatagctgtctcttgtgagactatgccggggcctagcaa
acacagaagtggatgatcacagtcagctattggatgggtcacacggcccc
caatggaggagctagagaaattactcaaggagctaaagggaactgcaacc
ctataggtgaaacaacattatgaactaaccaataccccggagctcttgac
tctagctgcatatgtatcaaaagatggcctagtcggccatcactgcaaag
agaggcccattggacttgcaaactgtatatgccccagtacaggggaaccc
cagggccaaaacgggggagtgggtgggtagtggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_63438770_63439604
seq2: B6Ng01-131O10.g_70_904

seq1  GAATTCACTTTGTGGCCAGGCTGGCTAAGAACTCATGAAGATCTGTCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTGGCCAGGCTGGCTAAGAACTCATGAAGATCTGTCTGC  50

seq1  TACTGCCTCCCAAGAGGCATTAAAGGCATGTGCCACTTTGCCCAGTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCTCCCAAGAGGCATTAAAGGCATGTGCCACTTTGCCCAGTTTTC  100

seq1  ATTATGTGCTCTTAATTAATGAAAGCATCCAGCTGAGGTCTTCCGGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTGCTCTTAATTAATGAAAGCATCCAGCTGAGGTCTTCCGGAAGG  150

seq1  AGTCTGTTCCTTGTAGACATCATGGGCCCAGTACCCTGTCTGTGTCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTTCCTTGTAGACATCATGGGCCCAGTACCCTGTCTGTGTCACAC  200

seq1  CTGCACTCACAGGACAAGTGGGAAAGCACACGTTTTCCGTTCTGTGTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTCACAGGACAAGTGGGAAAGCACACGTTTTCCGTTCTGTGTTCA  250

seq1  GTGAGGCATTGCATGTGATGTATGTGAACACCTGTGATGCCTTAGACAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGCATTGCATGTGATGTATGTGAACACCTGTGATGCCTTAGACAGC  300

seq1  ATACTCAACAATGAGAGAGCCATGGGTGTGAAAATGGAGACTTCCCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCAACAATGAGAGAGCCATGGGTGTGAAAATGGAGACTTCCCAGCC  350

seq1  TCCGGGAACCTCCATTTTTCTAACACTATTTAATGAAAAAACACTTCGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGGAACCTCCATTTTTCTAACACTATTTAATGAAAAAACACTTCGAA  400

seq1  AGAATGGACCATCATCTAGTGATTGCCATATGCAGGGATCCATCCCATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGACCATCATCTAGTGATTGCCATATGCAGGGATCCATCCCATAA  450

seq1  TCAGCTCCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTGCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTGCTGA  500

seq1  AAGGACCCAGATATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCCAGATATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAA  550

seq1  ACACAGAAGTGGATGATCACAGTCAGCTATTGGATGGGTCACACGGCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAGTGGATGATCACAGTCAGCTATTGGATGGGTCACACGGCCCC  600

seq1  CAATGGAGGAGCTAGAGAAATTACTCAAGGAGCTAAAGGGAACTGCAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAGGAGCTAGAGAAATTACTCAAGGAGCTAAAGGGAACTGCAACC  650

seq1  CTATAGGTGAAACAACATTATGAACTAACCAATACCCCGGAGCTCTTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGGTGAAACAACATTATGAACTAACCAATACCCCGGAGCTCTTGAC  700

seq1  TCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAAAG  750

seq1  AGAGGCCCATTGGACTTGCAAACTGTATATGCCCCAGTACAGGGGAACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCCATTGGACTTGCAAACTGTATATGCCCCAGTACAGGGGAACCC  800

seq1  CAGGGCCAAAACGGGGGAGTGGGTGGGTAGTGGTT  835
      |||||||||||||||||||||||||||||||||||
seq2  CAGGGCCAAAACGGGGGAGTGGGTGGGTAGTGGTT  835