BAC Information

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BAC

Clone NameB6Ng01-132F12
Chromosome18 (Build37)
Map Location 29,054,057 - 29,156,367
singlet/doubletdoublet
Overlap genenone
Upstream geneEG271505, EG625997, BC051408
Downstream geneLOC100040930, 4930578E11Rik, LOC666073
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132F12.bB6Ng01-132F12.g
ACCDH933170DH933171
length1,1241,110
definitionDH933170|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F12, 5' end.DH933171|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,054,057 - 29,055,207)(29,155,244 - 29,156,367)
sequence
gaattccacaagaagaaatgtttggtagggtattgacttagtgctgctca
ttaggtactgaaacaagctgccagacaaccatatgatgatcgtggcatct
tatctcagcaaatgttagagtcaggatgattaaattggtctcctctagat
gacaaaactatgaaccagcaaggaaggaatctcctcgattcttctggcat
agatgctgttattcgagattatgtgataattacatatggataacatggca
cgtagtggtgaccatgttcagtagacatcagtgaaccatttagggacatt
ggttcctctttctatttttattaattggtaattttatttatttgcatttc
aaatgctgtcctcctttctggtttctcctctgaatcctatcaccaccccc
aatcctatccccttctcctttgtttcctctttcttgctctgtagacaaaa
tggaagattttatctgagaaaaaaaaaaaggttataagattgaaggaaat
gagggaaacataagaacagtatccattacaggtcatattcataaatatag
gttatcattctatgtttatattatttatttactaattcctgagattagca
catagtctcttctgcatctagcagcaagaacctatcaattggatagaatt
caatatctcactctgggaaaatgatgattgtcaacttgatttggattcag
agaaaggatggtgttttaaaatctgtgtttgatagagaggttttgatgtt
aacatttagataaagcaaatatcatagacaaaagcagggacgaaaacgtg
attggcttgaaaacttactttaatcattcactccaagtgtcttcttacga
aaagcattgggtttgtactttagccatttttggctttttttttctttctt
tttttaatatttaaatattctaagcagtgaggtaacatatatttttattt
tccttttgtgaaagggatgtttgtgtctttaaataagatactatatcttg
tgtcttctttctttctttctatttagttgtaacactgaaacatcaaagtc
atttttcatggatatcgcgcattgaagagaatgctgaggtaatgcctttt
cggcaaagacctctgactaacatc
gaattcctagtagatacaatctcagagcctgctcctctaactaatacaac
cttcaggccctcttctacaatgttctctgaggcatatatgttttctgtga
gaatttctatatttcattttgagctgattttcctttcacatgaagagaat
ttagtcacagagtgatgaaatgtgagtggaaatctaaatgtcaagtgtct
tctaagggtatatttgtgatcctctggctggatcaaaatgaaattatctg
actccatggtttgttttaattgtaatatttaaattatttggagaacttca
tacatgtactccatgtgtactgattatgctcaccccatattaccgtgcca
acttctgccaagtctgcccccaacctctcttcaaactttatattattctt
caatatttcatatcccatagagtctaattactgctatgtaatatactcat
gggccaaacaaaacaatcttgtaaatgaagatgtttgtgaaatggcaaac
cactgtgtgttccaagtaaaatgaggcatagaatagctctttgtttcttt
tagagtgctaaaacatgcagatacatgacactggacattacattaatttg
aaagttgagatgaagtatgttaggtgaccaaggaaaagatgcagctttca
caactagtattcataaaacagacaagtagtaggaccatacaaataagaaa
caggagcataagcagatgatcctggagcataagggtagagccttaaaccc
aatggcaaggaaagagtaaatatgtacaaactatgaaaagctgaactaca
gagaagcaattggctcctggctaggaaatggtataaatacccaaattttt
caaagtttcaactcttctttattttatctcattttaatgtctttagctaa
ttatttaataacatatttctctcttgaaattttcctttaccaaagggaat
gcagtagtattcaagagcttgctgatgagttggtagttttatgtgtatgc
aagagtatttcatgtatacaaacctacacttttaatattacttgacagtg
ccaaccaacatgttttgtggggtaatttccgttcgatatttaccagagtg
acagtcacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_29054057_29055207
seq2: B6Ng01-132F12.b_48_1171

seq1  GAATTCCACAAGAAGAAATGTTTGGTAGGGTATTGACTTAGTGCTGCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAAGAAGAAATGTTTGGTAGGGTATTGACTTAGTGCTGCTCA  50

seq1  TTAGGTACTGAAACAAGCTGCCAGACAACCATATGATGATCGTGGCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTACTGAAACAAGCTGCCAGACAACCATATGATGATCGTGGCATCT  100

seq1  TATCTCAGCAAATGTTAGAGTCAGGATGATTAAATTGGTCTCCTCTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAGCAAATGTTAGAGTCAGGATGATTAAATTGGTCTCCTCTAGAT  150

seq1  GACAAAACTATGAACCAGCAAGGAAGGAATCTCCTCGATTCTTCTGGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAACTATGAACCAGCAAGGAAGGAATCTCCTCGATTCTTCTGGCAT  200

seq1  AGATGCTGTTATTCGAGATTATGTGATAATTACATATGGATAACATGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGTTATTCGAGATTATGTGATAATTACATATGGATAACATGGCA  250

seq1  CGTAGTGGTGACCATGTTCAGTAGACATCAGTGAACCATTTAGGGACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGTGGTGACCATGTTCAGTAGACATCAGTGAACCATTTAGGGACATT  300

seq1  GGTTCCTCTTTCTATTTTTATTAATTGGTAATTTTATTTATTTGCATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTCTTTCTATTTTTATTAATTGGTAATTTTATTTATTTGCATTTC  350

seq1  AAATGCTGTCCTCCTTTCTGGTTTCTCCTCTGAATCCTATCACCACCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTGTCCTCCTTTCTGGTTTCTCCTCTGAATCCTATCACCACCCCC  400

seq1  AATCCTATCCCCTTCTCCTTTGTTTCCTCTTTCTTGCTCTGTAGACAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTATCCCCTTCTCCTTTGTTTCCTCTTTCTTGCTCTGTAGACAAAA  450

seq1  TGGAAGATTTTATCTGAGAAAAAAAAAAAGGTTATAAGATTGAAGGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGATTTTATCTGAGAAAAAAAAAAAGGTTATAAGATTGAAGGAAAT  500

seq1  GAGGGAAACATAAGAACAGTATCCATTACAGGTCATATTCATAAATATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAACATAAGAACAGTATCCATTACAGGTCATATTCATAAATATAG  550

seq1  GTTATCATTCTATGTTTATATTATTTATTTACTAATTCCTGAGATTAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCATTCTATGTTTATATTATTTATTTACTAATTCCTGAGATTAGCA  600

seq1  CATAGTCTCTTCTGCATCTAGCAGCAAGAACCTATCAATTGGATAGAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTCTCTTCTGCATCTAGCAGCAAGAACCTATCAATTGGATAGAATT  650

seq1  CAATATCTCACTCTGGGAAAATGATGATTGTCAACTTGATTTGGATTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCTCACTCTGGGAAAATGATGATTGTCAACTTGATTTGGATTCAG  700

seq1  AGAAAGGATGGTGTTTTAAAATCTGTGTTTGATAGAGAGGTTTTGATGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGATGGTGTTTTAAAATCTGTGTTTGATAGAGAGGTTTTGATGTT  750

seq1  AACATTTAGATAAAGCAAATATCATAGACAAAAGCAGGGACGAAAACGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTAGATAAAGCAAATATCATAGACAAAAGCAGGGACGAAAACGTG  800

seq1  ATTGGCTTGAAAACTTACTTTAATCATTCACTCCAAGTGTCTTCTTACGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTTGAAAACTTACTTTAATCATTCACTCCAAGTGTCTTCTTACGA  850

seq1  AAAGCATTGGGTTTGTACTTTAGCCATTTTTGGC-TTTTTTTTCTTTCTT  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAAGCATTGGGTTTGTACTTTAGCCATTTTTGGCTTTTTTTTTCTTTCTT  900

seq1  TTTTTAATATTTAAATATTCTAAGCAGTGAGGTAACATATATTTTTATTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATATTTAAATATTCTAAGCAGTGAGGTAACATATATTTTTATTT  950

seq1  TTCCTTTTTGTGAAAAGGAATGTTTGTGTTCTTTATATAAGATACTATAT  999
      |  | ||||||| ||||| ||||||||| |||||| ||||||||||||||
seq2  T--CCTTTTGTG-AAAGGGATGTTTGTG-TCTTTAAATAAGATACTATAT  996

seq1  CTTTGTTGTTCTTTCTTTTCTTTTCTTTTTCTTATTTTAGTTGTAACACT  1049
      |||   | |||||||||        | |||||   |||||||||||||||
seq2  CTTGTGTCTTCTTTCTT--------TCTTTCT--ATTTAGTTGTAACACT  1036

seq1  GAAAACATCCAAAAGTCATCTTTCATGGATATCGGCAGCAATGTAGAGAA  1099
      | |||||||  |||||||| ||||||||||||||   ||| || ||||||
seq2  G-AAACATC--AAAGTCATTTTTCATGGATATCG--CGCATTGAAGAGAA  1081

seq1  TGGCTTGGAGGTAATGCCTTTTCTGTCAAAAAGACCACTGACATACAACA  1149
      | |||  |||||||||||||||| |    ||||||| |||||    ||||
seq2  T-GCT--GAGGTAATGCCTTTTCGG---CAAAGACCTCTGAC---TAACA  1122

seq1  TC  1151
      ||
seq2  TC  1124

seq1: chr18_29155244_29156367
seq2: B6Ng01-132F12.g_65_1174 (reverse)

seq1  CTGTGACTGGTCACTCTTGTGAAATATCCAAAGGGAAATATACCCACAAA  50
      |||||||| |||||||| || |||||| | || ||||||   ||||||||
seq2  CTGTGACT-GTCACTCTGGT-AAATAT-CGAACGGAAATTACCCCACAAA  47

seq1  ACATGTTTGTTTGGCACTGTTCAAGTAATTATTTAAAAGTGTAGTTTTGT  100
      ||||| ||| ||||||||| |||||||||   |||||||||||| |||||
seq2  ACATG-TTGGTTGGCACTG-TCAAGTAAT--ATTAAAAGTGTAGGTTTGT  93

seq1  ATACATGAAATACTCTTTGCATACAACATAATACTACCAAACTCATCAGC  150
      ||||||||||||||| |||||||| |||||| |||||| |||||||||||
seq2  ATACATGAAATACTC-TTGCATAC-ACATAAAACTACC-AACTCATCAGC  140

seq1  AAGCTCTTTGAATACCTACTGCATTCCCTTTGGTAAAGGAAAAATTTCAA  200
      |||||| ||||||| |||||||||||||||||||||||| ||||||||||
seq2  AAGCTC-TTGAATA-CTACTGCATTCCCTTTGGTAAAGG-AAAATTTCAA  187

seq1  GAGAGAAATATTGTTATTAAATAATTAGCTAAAGACATTAAAATGAGATA  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAATA-TGTTATTAAATAATTAGCTAAAGACATTAAAATGAGATA  236

seq1  AAATAAAGAAGAGTTGAAACTTTGAAAAATTTGGGTATTTATACCATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGAAGAGTTGAAACTTTGAAAAATTTGGGTATTTATACCATTTC  286

seq1  CTAGCCAGGAGCCAATTGCTTCTCTGTAGTTCAGCTTTTCATAGTTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCAGGAGCCAATTGCTTCTCTGTAGTTCAGCTTTTCATAGTTTGTA  336

seq1  CATATTTACTCTTTCCTTGCCATTGGGTTTAAGGCTCTACCCTTATGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTACTCTTTCCTTGCCATTGGGTTTAAGGCTCTACCCTTATGCTC  386

seq1  CAGGATCATCTGCTTATGCTCCTGTTTCTTATTTGTATGGTCCTACTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCATCTGCTTATGCTCCTGTTTCTTATTTGTATGGTCCTACTACT  436

seq1  TGTCTGTTTTATGAATACTAGTTGTGAAAGCTGCATCTTTTCCTTGGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTTTATGAATACTAGTTGTGAAAGCTGCATCTTTTCCTTGGTCA  486

seq1  CCTAACATACTTCATCTCAACTTTCAAATTAATGTAATGTCCAGTGTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACATACTTCATCTCAACTTTCAAATTAATGTAATGTCCAGTGTCAT  536

seq1  GTATCTGCATGTTTTAGCACTCTAAAAGAAACAAAGAGCTATTCTATGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGCATGTTTTAGCACTCTAAAAGAAACAAAGAGCTATTCTATGCC  586

seq1  TCATTTTACTTGGAACACACAGTGGTTTGCCATTTCACAAACATCTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTACTTGGAACACACAGTGGTTTGCCATTTCACAAACATCTTCAT  636

seq1  TTACAAGATTGTTTTGTTTGGCCCATGAGTATATTACATAGCAGTAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGATTGTTTTGTTTGGCCCATGAGTATATTACATAGCAGTAATTA  686

seq1  GACTCTATGGGATATGAAATATTGAAGAATAATATAAAGTTTGAAGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTATGGGATATGAAATATTGAAGAATAATATAAAGTTTGAAGAGAG  736

seq1  GTTGGGGGCAGACTTGGCAGAAGTTGGCACGGTAATATGGGGTGAGCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGGGCAGACTTGGCAGAAGTTGGCACGGTAATATGGGGTGAGCATA  786

seq1  ATCAGTACACATGGAGTACATGTATGAAGTTCTCCAAATAATTTAAATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTACACATGGAGTACATGTATGAAGTTCTCCAAATAATTTAAATAT  836

seq1  TACAATTAAAACAAACCATGGAGTCAGATAATTTCATTTTGATCCAGCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTAAAACAAACCATGGAGTCAGATAATTTCATTTTGATCCAGCCA  886

seq1  GAGGATCACAAATATACCCTTAGAAGACACTTGACATTTAGATTTCCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATCACAAATATACCCTTAGAAGACACTTGACATTTAGATTTCCACT  936

seq1  CACATTTCATCACTCTGTGACTAAATTCTCTTCATGTGAAAGGAAAATCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTCATCACTCTGTGACTAAATTCTCTTCATGTGAAAGGAAAATCA  986

seq1  GCTCAAAATGAAATATAGAAATTCTCACAGAAAACATATATGCCTCAGAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAAATGAAATATAGAAATTCTCACAGAAAACATATATGCCTCAGAG  1036

seq1  AACATTGTAGAAGAGGGCCTGAAGGTTGTATTAGTTAGAGGAGCAGGCTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGTAGAAGAGGGCCTGAAGGTTGTATTAGTTAGAGGAGCAGGCTC  1086

seq1  TGAGATTGTATCTACTAGGAATTC  1124
      ||||||||||||||||||||||||
seq2  TGAGATTGTATCTACTAGGAATTC  1110