BAC Information

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BAC

Clone NameB6Ng01-132H13
Chromosome18 (Build37)
Map Location 30,850,536 - 30,980,898
singlet/doubletdoublet
Overlap genenone
Upstream genePik3c3, LOC666094, LOC666100, EG666111, EG666114, LOC433168
Downstream geneRit2, EG666130, Syt4, LOC383420, Slc25a46, Sap130, LOC640549, Ammecr1l, Polr2d, EG626327
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132H13.bB6Ng01-132H13.g
ACCDH933266DH933267
length1,097561
definitionDH933266|Mus musculus domesticus DNA, BAC clone: B6Ng01-132H13, 5' end.DH933267|Mus musculus domesticus DNA, BAC clone: B6Ng01-132H13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,979,799 - 30,980,898)(30,850,536 - 30,851,096)
sequence
gaattctatagatgcccatgatgaacttctacaaaataaatgtataatta
gtaaaaaatgaggacattctaataattaaaattaaaatgcatgtttctat
taaaaggagtgtgtgtgtgctctactttgaattttcccagaggtaggcag
agattaaataatccaagtacagttttatttagaagtaaaaggagtaggaa
gtggggagtaaagactgagagcagaaacacaaccaatggaagatcaacaa
gtgtcaatgaatgagcatgcccaccacagaaagaaacctggggtgaagcc
agcagagaactctgggaaaacctgcaactcctacattggcagctggggca
gtgttgtgacttcctgtgacagaaagtgctgaaatgtggaacaggatggg
tgtgcaccagagggggagggtaagagaaatagtagtaaatataatgcatc
ccagaatatctgcctgacacaatagcactattggaattgcacgccaagag
taccttccaagagtcttcataagaagagattcttttcttttcaccattct
acctcccattcataaactatgaaaaaaatccctcataatagaaaagccct
caagatacatattccatgttttattatagtcaacacttgaagggccattt
aattcttctagaaagaggtacttcaatacgtttcttatcatggtgagatc
tcagacccttctctttaaagaggatcatcatttattattactaactctat
gtgaaataatcttattgctagcaaagatgtgaaagaagccaaaatctatt
tgtttgtgaaagtttgcaccagaaaataaaatttactgacaaacatacaa
aacatataacagaactaaaatgggataatataaatagatactaatgaatg
aacctgactatacttttagtatcctttccttggagaaatgacttgttcaa
ttttaagtggctaaacaaaaactttcacttgcagaaacaataggaaacag
cagatgccacacatggcttgatattggtttttagctcagcaagcaagctg
tgatagatatttccagttggattagaatacccaaggatgaatcatga
gaattctacattctggggactggtgaaggctaagcaattaaatattgtac
ttattaatatcttcttataagtatatattagctgaaaattaaaggataat
tatgctatattccacagacccagagaggctaagtaacaaggagagataat
gatattctgcaatcctagtagttaagagcctagtataattatcatcagaa
aggcttcaaccagcaactgatggaaacagatgcagaaaaccacagcaaaa
cataaggcagaattcaggaaattctgtacaagacggggaagtctgggcat
atgggggctcacagagattgaacagacagatactaaactaataataatag
gccttcattggtttgacctaggccctctgcatatatgttgtggttgtatt
agttggtcttttgtgggacttctaaccatgggagtggagtagggggttgt
ccctatctcttttgattccttttgggacctttttcttctagctggatcac
ctcatcccagcttcataagaggtttgtacctaatcttatataacttgtaa
tgccatgtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_30979799_30980898
seq2: B6Ng01-132H13.b_48_1144 (reverse)

seq1  TCATGATTCATTCTTTGGTATTCTAATTCCAACTGGAAATATCTATCCAC  50
      ||||||||||| ||| |||||||||| ||||||||||||||||||| |||
seq2  TCATGATTCATCCTTGGGTATTCTAA-TCCAACTGGAAATATCTAT-CAC  48

seq1  AGCTTGCTTGCTGAGCTAAAAACACATATCAAGCCATGTGTGCATTCTGC  100
      |||||||||||||||||||||||  |||||||||||||||||   |||||
seq2  AGCTTGCTTGCTGAGCTAAAAACCAATATCAAGCCATGTGTGGCATCTGC  98

seq1  TGTTTCCTTATTGTTTCTTGCAAGTGAAAGTTTTTGTTTAGCCACTTAAA  150
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  TGTTTCC-TATTGTTTC-TGCAAGTGAAAGTTTTTGTTTAGCCACTTAAA  146

seq1  ATTGAACAAGTCATTTCTCCAAGGAAAGGATACTAAAAGTATAGTCAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACAAGTCATTTCTCCAAGGAAAGGATACTAAAAGTATAGTCAGGT  196

seq1  TCATTCATTAGTATCTATTTATA-TATCCCATTTTAGTTCTGTTATATGT  249
      ||||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  TCATTCATTAGTATCTATTTATATTATCCCATTTTAGTTCTGTTATATG-  245

seq1  TTTTGTATGTTTGTCAGT-AATTTTATTTTCTGGTGCAAACTTTCACAAA  298
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTTGTATGTTTGTCAGTAAATTTTATTTTCTGGTGCAAACTTTCACAAA  295

seq1  CAAATAGATTTTGGCTTCTTTCACATCTTTGCTAGCAATAAGATTATTTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGATTTTGGCTTCTTTCACATCTTTGCTAGCAATAAGATTATTTC  345

seq1  ACATAGAGTTAGTAATAATAAATGATGATCCTCTTTAAAGAGAAGGGTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGTTAGTAATAATAAATGATGATCCTCTTTAAAGAGAAGGGTCT  395

seq1  GAGATCTCACCATGATAAGAAACGTATTGAAGTACCTCTTTCTAGAAGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCTCACCATGATAAGAAACGTATTGAAGTACCTCTTTCTAGAAGAA  445

seq1  TTAAATGGCCCTTCAAGTGTTGACTATAATAAAACATGGAATATGTATCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGGCCCTTCAAGTGTTGACTATAATAAAACATGGAATATGTATCT  495

seq1  TGAGGGCTTTTCTATTATGAGGGATTTTTTTCATAGTTTATGAATGGGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGCTTTTCTATTATGAGGGATTTTTTTCATAGTTTATGAATGGGAG  545

seq1  GTAGAATGGTGAAAAGAAAAGAATCTCTTCTTATGAAGACTCTTGGAAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAATGGTGAAAAGAAAAGAATCTCTTCTTATGAAGACTCTTGGAAGG  595

seq1  TACTCTTGGCGTGCAATTCCAATAGTGCTATTGTGTCAGGCAGATATTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTGGCGTGCAATTCCAATAGTGCTATTGTGTCAGGCAGATATTCT  645

seq1  GGGATGCATTATATTTACTACTATTTCTCTTACCCTCCCCCTCTGGTGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCATTATATTTACTACTATTTCTCTTACCCTCCCCCTCTGGTGCA  695

seq1  CACCCATCCTGTTCCACATTTCAGCACTTTCTGTCACAGGAAGTCACAAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCATCCTGTTCCACATTTCAGCACTTTCTGTCACAGGAAGTCACAAC  745

seq1  ACTGCCCCAGCTGCCAATGTAGGAGTTGCAGGTTTTCCCAGAGTTCTCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCCAGCTGCCAATGTAGGAGTTGCAGGTTTTCCCAGAGTTCTCTG  795

seq1  CTGGCTTCACCCCAGGTTTCTTTCTGTGGTGGGCATGCTCATTCATTGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTCACCCCAGGTTTCTTTCTGTGGTGGGCATGCTCATTCATTGAC  845

seq1  ACTTGTTGATCTTCCATTGGTTGTGTTTCTGCTCTCAGTCTTTACTCCCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTGATCTTCCATTGGTTGTGTTTCTGCTCTCAGTCTTTACTCCCC  895

seq1  ACTTCCTACTCCTTTTACTTCTAAATAAAACTGTACTTGGATTATTTAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTACTCCTTTTACTTCTAAATAAAACTGTACTTGGATTATTTAAT  945

seq1  CTCTGCCTACCTCTGGGAAAATTCAAAGTAGAGCACACACACACTCCTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTACCTCTGGGAAAATTCAAAGTAGAGCACACACACACTCCTTT  995

seq1  TAATAGAAACATGCATTTTAATTTTAATTATTAGAATGTCCTCATTTTTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGAAACATGCATTTTAATTTTAATTATTAGAATGTCCTCATTTTTT  1045

seq1  ACTAATTATACATTTATTTTGTAGAAGTTCATCATGGGCATCTATAGAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTATACATTTATTTTGTAGAAGTTCATCATGGGCATCTATAGAAT  1095

seq1  TC  1100
      ||
seq2  TC  1097

seq1: chr18_30850536_30851096
seq2: B6Ng01-132H13.g_70_630

seq1  GAATTCTACATTCTGGGGACTGGTGAAGGCTAAGCAATTAAATATTGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATTCTGGGGACTGGTGAAGGCTAAGCAATTAAATATTGTAC  50

seq1  TTATTAATATCTTCTTATAAGTATATATTAGCTGAAAATTAAAGGATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATATCTTCTTATAAGTATATATTAGCTGAAAATTAAAGGATAAT  100

seq1  TATGCTATATTCCACAGACCCAGAGAGGCTAAGTAACAAGGAGAGATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTATATTCCACAGACCCAGAGAGGCTAAGTAACAAGGAGAGATAAT  150

seq1  GATATTCTGCAATCCTAGTAGTTAAGAGCCTAGTATAATTATCATCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCTGCAATCCTAGTAGTTAAGAGCCTAGTATAATTATCATCAGAA  200

seq1  AGGCTTCAACCAGCAACTGATGGAAACAGATGCAGAAAACCACAGCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCAACCAGCAACTGATGGAAACAGATGCAGAAAACCACAGCAAAA  250

seq1  CATAAGGCAGAATTCAGGAAATTCTGTACAAGACGGGGAAGTCTGGGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGCAGAATTCAGGAAATTCTGTACAAGACGGGGAAGTCTGGGCAT  300

seq1  ATGGGGGCTCACAGAGATTGAACAGACAGATACTAAACTAATAATAATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGGCTCACAGAGATTGAACAGACAGATACTAAACTAATAATAATAG  350

seq1  GCCTTCATTGGTTTGACCTAGGCCCTCTGCATATATGTTGTGGTTGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCATTGGTTTGACCTAGGCCCTCTGCATATATGTTGTGGTTGTATT  400

seq1  AGTTGGTCTTTTGTGGGACTTCTAACCATGGGAGTGGAGTAGGGGGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTCTTTTGTGGGACTTCTAACCATGGGAGTGGAGTAGGGGGTTGT  450

seq1  CCCTATCTCTTTTGATTCCTTTTGGGACCTTTTTCTTCTAGCTGGATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATCTCTTTTGATTCCTTTTGGGACCTTTTTCTTCTAGCTGGATCAC  500

seq1  CTCATCCCAGCTTCATAAGAGGTTTGTACCTAATCTTATATAACTTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCCAGCTTCATAAGAGGTTTGTACCTAATCTTATATAACTTGTAA  550

seq1  TGCCATGTTTG  561
      |||||||||||
seq2  TGCCATGTTTG  561