BAC Information

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BAC

Clone NameB6Ng01-132L24
Chromosome18 (Build37)
Map Location 14,712,472 - 14,843,849
singlet/doubletdoublet
Overlap geneEG623867, Ss18, LOC100040446
Upstream geneLOC100040358, Zfp521, LOC100040094, LOC100040103, LOC100040391, LOC382096, LOC100040129
Downstream genePsma8, Taf4b, LOC669965, Kctd1, EG622268, LOC100040151, Aqp4, LOC665473, Chst9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132L24.bB6Ng01-132L24.g
ACCDH933473DH933474
length1,019819
definitionDH933473|Mus musculus domesticus DNA, BAC clone: B6Ng01-132L24, 5' end.DH933474|Mus musculus domesticus DNA, BAC clone: B6Ng01-132L24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,842,828 - 14,843,849)(14,712,472 - 14,713,293)
sequence
gaattccacaaggtcaagaggagggactaaaagcccaggcccatagtgac
acacttcctccaacaaggccacacctccaaatagtgccacctcctgggcc
aagcatattcaaaccatcacaagtaggtttcctttatagttgtcttcttt
cctggagatcatttgcaattttggatggcccctttgatcaatgctttgca
acagatgtaatacaaagatcatacaaaaaaaacaagtattttaatgtcaa
tcagataaccacaaaaaaggctgtggttgtttcctacatgggccttacag
tcctagacactatctcactattccaaatacttgaagccttataacctttg
gtctatagagtcctcttttctactcttagccaccccccccccctttaaaa
aaaaaggtatactgtagctgtcttcagacacactggaagagggcatgaga
tcccattacagatggttgtgagccaccttgtaggtgctgggaattgaact
caggacctctggaggaacagtcagtgctcttaaccactgagccatctctc
cagcacccagtaagctctcatttaaagagtcctgcctgggatgagaactt
ttcacatgtaattgtttttcttttaaaaaactgcaatgtagaggtgcaga
cacctgctgatttggtttgcttgtagaatttccataccgtctgccaagtg
gactaaggggagccacaggactgtttcagattcagctttcccactgaaat
cctgtccctaatcaccatgatgttgttggaaaatcaaatgtgaccatcct
tgccaaccatcaggcacacagtgttagcgcggacagtaactggttattgt
tcagccttcggtagaattttcagttgtgttacatgaatccatttgtatca
cagcaggctccttaggtttaggatagtgaaagaccaagaagttacttctc
aagaacagtttcattgtaaggagagagaaggttccatcctttgatgtaga
atggccagagtcttcatct
gaattcagctgtcctgaatgaactgggctgtttgtttgtattagctgata
gacaaggagaaaagtgggggtgaggaaagtacggagtcagcacagttcag
gattctgggctcctttgagaatacagcaccattcacaaaaacagagtgtg
tttggatgttggtttggtgaatgccaaccattatagatgctaaacagaca
acttctggcttaaagtcagccaggtctgtctccatcagaagatgtctcaa
gagtacacatctcgttgggcattggtggtgtacacctttaatcccagcac
ttgggaggcagaggaaggcagatttctgagtttgaggccagcctggtcaa
cacagtgagttccaggacaaccagggctacacagagaaaccctgtctcaa
aaaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa
agaaagggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaa
aggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaagaatacaca
atacacatctcaggggagaagaagaagagagaaagagtggtctctaaaaa
gggagacagtcatggagaaaaccaagctttatcacgaaagccagagggta
tcaaaccagtttggagaacaacaagggcttagggagcgccggacggtgca
gaaaatacccaggctgggaagatcagaaaccatagcagctgcttttgcca
tgaagttgtgaaagtgatgccaagaatgaaatttattttattcattaatt
tttaaatgagtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14842828_14843849
seq2: B6Ng01-132L24.b_51_1069 (reverse)

seq1  AGATGAAGACTCTGGCCATTCTAACATCAAAGGATGGAACCTTCTCTCTC  50
      |||||||||||||||||||||| |||||||||||||||||||||||||| 
seq2  AGATGAAGACTCTGGCCATTCT-ACATCAAAGGATGGAACCTTCTCTCT-  48

seq1  CCTTACAATGGTAACTGTTCTTGAGAAGTAACTTCTT-GTCTTTCACTAT  99
      ||||||||| | ||||||||||||||||||||||||| ||||||||||||
seq2  CCTTACAAT-GAAACTGTTCTTGAGAAGTAACTTCTTGGTCTTTCACTAT  97

seq1  CCTAAACCTAAGGAGCCTGCTGTGATACAAATGGATTCATGTAAACACAC  149
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  CCTAAACCTAAGGAGCCTGCTGTGATACAAATGGATTCATGT-AACACAA  146

seq1  CTGAAAATTCTACCGAAGGCTGAACAATAACCAGTTACTGTCCGCGCTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATTCTACCGAAGGCTGAACAATAACCAGTTACTGTCCGCGCTAA  196

seq1  CACTGTGTGCCTGATGGTTGGCAAGGATGGTCACATTTGATTTTCCAACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGTGCCTGATGGTTGGCAAGGATGGTCACATTTGATTTTCCAACA  246

seq1  ACATCATGGTGATTAGGGACAGGATTTCAGTGGGAAAGCTGAATCTGAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATGGTGATTAGGGACAGGATTTCAGTGGGAAAGCTGAATCTGAAA  296

seq1  CAGTCCTGTGGCTCCCCTTAGTCCACTTGGCAGACGGTATGGAAATTCTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTGTGGCTCCCCTTAGTCCACTTGGCAGACGGTATGGAAATTCTA  346

seq1  CAAGCAAACCAAATCAGCAGGTGTCTGCACCTCTACATTGCAGTTTTTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAACCAAATCAGCAGGTGTCTGCACCTCTACATTGCAGTTTTTTA  396

seq1  AAAGAAAAACAATTACATGTGAAAAGTTCTCATCCCAGGCAGGACTCTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAACAATTACATGTGAAAAGTTCTCATCCCAGGCAGGACTCTTT  446

seq1  AAATGAGAGCTTACTGGGTGCTGGAGAGATGGCTCAGTGGTTAAGAGCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGAGCTTACTGGGTGCTGGAGAGATGGCTCAGTGGTTAAGAGCAC  496

seq1  TGACTGTTCCTCCAGAGGTCCTGAGTTCAATTCCCAGCACCTACAAGGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTTCCTCCAGAGGTCCTGAGTTCAATTCCCAGCACCTACAAGGTG  546

seq1  GCTCACAACCATCTGTAATGGGATCTCATGCCCTCTTCCAGTGTGTCTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACAACCATCTGTAATGGGATCTCATGCCCTCTTCCAGTGTGTCTGA  596

seq1  AGACAGCTACAGTATACCTTTTTTTTTAAAGGGGGGGGGGGTGGCTAAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCTACAGTATACCTTTTTTTTTAAAGGGGGGGGGGGTGGCTAAGA  646

seq1  GTAGAAAAGAGGACTCTATAGACCAAAGGTTATAAGGCTTCAAGTATTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAAGAGGACTCTATAGACCAAAGGTTATAAGGCTTCAAGTATTTG  696

seq1  GAATAGTGAGATAGTGTCTAGGACTGTAAGGCCCATGTAGGAAACAACCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGTGAGATAGTGTCTAGGACTGTAAGGCCCATGTAGGAAACAACCA  746

seq1  CAGCCTTTTTTGTGGTTATCTGATTGACATTAAAATACTTGTTTTTTTTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTTTTGTGGTTATCTGATTGACATTAAAATACTTGTTTTTTTTG  796

seq1  TATGATCTTTGTATTACATCTGTTGCAAAGCATTGATCAAAGGGGCCATC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCTTTGTATTACATCTGTTGCAAAGCATTGATCAAAGGGGCCATC  846

seq1  CAAAATTGCAAATGATCTCCAGGAAAGAAGACAACTATAAAGGAAACCTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTGCAAATGATCTCCAGGAAAGAAGACAACTATAAAGGAAACCTA  896

seq1  CTTGTGATGGTTTGAATATGCTTGGCCCAGGAGGTGGCACTATTTGGAGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGATGGTTTGAATATGCTTGGCCCAGGAGGTGGCACTATTTGGAGG  946

seq1  TGTGGCCTTGTTGGAGGAAGTGTGTCACTATGGGCCTGGGCTTTTAGTCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCTTGTTGGAGGAAGTGTGTCACTATGGGCCTGGGCTTTTAGTCC  996

seq1  CTCCTCTTGACCTTGTGGAATTC  1022
      |||||||||||||||||||||||
seq2  CTCCTCTTGACCTTGTGGAATTC  1019

seq1: chr18_14712472_14713293
seq2: B6Ng01-132L24.g_66_884

seq1  GAATTCAGCTGTCCTGAATGAACTGGGCTGTTTGTTTGTATTAGCTGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTGTCCTGAATGAACTGGGCTGTTTGTTTGTATTAGCTGATA  50

seq1  GACAAGGAGAAAAGTGGGGGTGAGGAAAGTACGGAGTCAGCACAGTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGAGAAAAGTGGGGGTGAGGAAAGTACGGAGTCAGCACAGTTCAG  100

seq1  GATTCTGGGCTCCTTTGAGAATACAGCACCATTCACAAAAACAGAGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGGGCTCCTTTGAGAATACAGCACCATTCACAAAAACAGAGTGTG  150

seq1  TTTGGATGTTGGTTTGGTGAATGCCAACCATTATAGATGCTAAACAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATGTTGGTTTGGTGAATGCCAACCATTATAGATGCTAAACAGACA  200

seq1  ACTTCTGGCTTAAAGTCAGCCAGGTCTGTCTCCATCAGAAGATGTCTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGGCTTAAAGTCAGCCAGGTCTGTCTCCATCAGAAGATGTCTCAA  250

seq1  GAGTACACATCTCGTTGGGCATTGGTGGTGTACACCTTTAATCCCAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACACATCTCGTTGGGCATTGGTGGTGTACACCTTTAATCCCAGCAC  300

seq1  TTGGGAGGCAGAGGAAGGCAGATTTCTGAGTTTGAGGCCAGCCTGGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGCAGAGGAAGGCAGATTTCTGAGTTTGAGGCCAGCCTGGTCAA  350

seq1  CACAGTGAGTTCCAGGACAACCAGGGCTACACAGAGAAACCCTGTCTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGAGTTCCAGGACAACCAGGGCTACACAGAGAAACCCTGTCTCAA  400

seq1  AAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  450

seq1  AGAAAGGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAA  500
      ||||||     |||||||||||||||||||||||||||||||||||||||
seq2  AGAAAG-----GGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAA  495

seq1  AGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGAAT  545

seq1  ACACAATACACATCTCAGGGGAGAAGAAGAAGAGAGAAAGAGTGGTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATACACATCTCAGGGGAGAAGAAGAAGAGAGAAAGAGTGGTCTCT  595

seq1  AAAAAGGGAGACAGTCATGGAGAAAACCAAGCTTTATCACGAAAGCCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGGAGACAGTCATGGAGAAAACCAAGCTTTATCACGAAAGCCAGA  645

seq1  GGGTATCAAACCAGTTTGGAGAACAACAAGGGCTTAGGGAGCGCCGGACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATCAAACCAGTTTGGAGAACAACAAGGGCTTAGGGAGCGCCGGACG  695

seq1  GTGCAGAAAATACCCAGGCTGGGAAGATCAG-AACCATAGCAGCTGCTTT  749
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTGCAGAAAATACCCAGGCTGGGAAGATCAGAAACCATAGCAGCTGCTTT  745

seq1  TGCCATGAAGTTGTGAAAGTGATGCCAAGAATGAAATTTA-TTTATTCAT  798
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGCCATGAAGTTGTGAAAGTGATGCCAAGAATGAAATTTATTTTATTCAT  795

seq1  TAATTTTTAAATGAGTGTGTGTGT  822
      ||||||||||||||||||||||||
seq2  TAATTTTTAAATGAGTGTGTGTGT  819