MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-133A18
Chromosome	18 (Build37)
Map Location	65,464,938 - 65,466,162
singlet/doublet	singlet
Overlap gene	Alpk2
Upstream gene	Onecut2, LOC667783, LOC100043304, Fech, Nars, Atp8b1, LOC629480, Nedd4l
Downstream gene	LOC667816, Malt1, LOC638570, LOC100042820, Zfp532, 5330437I02Rik, Sec11c, Grp, Rax, Cplx4, Lman1, Ccbe1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Onecut2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225631 MGI:1891408
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667783 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667783
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100043304 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043304
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 218 ESTs, 9 Proteins

name	Fech (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14151 MGI:95513
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nars (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70223 MGI:1917473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp8b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54670 MGI:1859665
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC629480 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 78 ESTs, 10 Proteins pseudo : _no_value

name	Nedd4l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83814 MGI:1933754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Alpk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225638 MGI:2449492
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 1 Protein

name	LOC667816 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667816
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Malt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240354 MGI:2445027
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC638570 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:638570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100042820 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Zfp532 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328977 MGI:3036282
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5330437I02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319888 MGI:2442915
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec11c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66286 MGI:1913536
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225642 MGI:95833
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rax (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19434 MGI:109632
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cplx4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225644 MGI:2685803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lman1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70361 MGI:1917611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccbe1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320924 MGI:2445053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Onecut2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119220567 GeneID:225631 MGI:1891408
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : one cut domain, family member 2 transcript_id : NM_194268.2

name	LOC100043304 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269860 GeneID:100043304
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 218 ESTs, 9 Proteins product : similar to S-adenosylmethionine decarboxylase transcript_id : XM_001480145.1

name	Fech (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801659 GeneID:14151 MGI:95513
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ferrochelatase transcript_id : NM_007998.4

name	Nars (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378446 GeneID:70223 MGI:1917473
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : asparaginyl-tRNA synthetase transcript_id : NM_027350.2

name	Atp8b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95007005 GeneID:54670 MGI:1859665
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, class I, type 8B, member 1 transcript_id : NM_001001488.3

name	Nedd4l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14010860 GeneID:83814 MGI:1933754
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neural precursor cell expressed, developmentally down-regulated gene 4-like transcript_id : NM_031881.1

name	Alpk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94404483 GeneID:225638 MGI:2449492
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 ESTs, 1 Protein product : alpha-kinase 2, transcript variant 2 transcript_id : XM_001002615.1

name	Alpk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94404485 GeneID:225638 MGI:2449492
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 1 Protein product : alpha-kinase 2, transcript variant 1 transcript_id : XM_001002606.1

name	Malt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129950 GeneID:240354 MGI:2445027
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mucosa associated lymphoid tissue lymphoma translocation gene 1 transcript_id : NM_172833.2

name	Zfp532 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402262 GeneID:328977 MGI:3036282
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 532 transcript_id : NM_207255.1

name	5330437I02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130333 GeneID:319888 MGI:2442915
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5330437I02 gene transcript_id : NM_177028.3

name	Sec11c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802396 GeneID:66286 MGI:1913536
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SEC11 homolog C (S. cerevisiae) transcript_id : NM_025468.2

name	Grp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341342 GeneID:225642 MGI:95833
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gastrin releasing peptide transcript_id : NM_175012.2

name	Rax (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89274178 GeneID:19434 MGI:109632
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retina and anterior neural fold homeobox transcript_id : NM_013833.2

name	Cplx4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703969 GeneID:225644 MGI:2685803
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complexin 4 transcript_id : NM_145493.1

name	Lman1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37537549 GeneID:70361 MGI:1917611
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lectin, mannose-binding, 1 transcript_id : NM_027400.2

name	Ccbe1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378017 GeneID:320924 MGI:2445053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : collagen and calcium binding EGF domains 1 transcript_id : NM_178793.4

name	Onecut2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119220568 CCDS:CCDS29302.1 GeneID:225631 MGI:1891408
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : transcription factor ONECUT2 product : one cut domain, family member 2 protein_id : NP_919244.2

name	LOC100043304 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269861 GeneID:100043304
definition	codon_start : 1 product : similar to S-adenosylmethionine decarboxylase protein_id : XP_001480195.1

name	Fech (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20452466 CCDS:CCDS29303.1 GeneID:14151 MGI:95513
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence TAS]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0004325 - ferrochelatase activity [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0009589 - detection of UV [Evidence IMP]; GO:0006783 - heme biosynthesis [Evidence TAS]; GO:0006779 - porphyrin biosynthesis [Evidence IMP] codon_start : 1 product : ferrochelatase protein_id : NP_032024.2

name	Nars (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789191 GeneID:70223 MGI:1917473
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : asparaginyl-tRNA synthetase protein_id : NP_081626.1

name	Atp8b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:80861460 CCDS:CCDS29304.1 GeneID:54670 MGI:1859665
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004012 - phospholipid-translocating ATPase activity [Evidence IEA] GO_process : GO:0008206 - bile acid metabolism [Evidence IMP]; GO:0006812 - cation transport [Evidence IEA] codon_start : 1 note : ATPase 8B1, p type; ATPase B1, class I; aminophospholipid translocase; familial intrahepatic cholestasis type I product : ATPase, class I, type 8B, member 1 protein_id : NP_001001488.2

name	Nedd4l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14010861 CCDS:CCDS29305.1 GeneID:83814 MGI:1933754
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : neural precursor cell expressed, developmentally down-regulated gene 4b product : neural precursor cell expressed, developmentally down-regulated gene 4-like protein_id : NP_114087.1

name	Alpk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94404484 GeneID:225638 MGI:2449492
definition	codon_start : 1 product : alpha-kinase 2 isoform 2 protein_id : XP_001002615.1

name	Alpk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94404486 GeneID:225638 MGI:2449492
definition	codon_start : 1 product : alpha-kinase 2 isoform 1 protein_id : XP_001002606.1

name	Malt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370250 CCDS:CCDS29306.1 GeneID:240354 MGI:2445027
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0042981 - regulation of apoptosis [Evidence ISS] codon_start : 1 note : paracaspase product : mucosa associated lymphoid tissue lymphoma translocation gene 1 protein_id : NP_766421.1

name	Zfp532 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402263 CCDS:CCDS29307.1 GeneID:328977 MGI:3036282
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein 532 protein_id : NP_997138.1

name	5330437I02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892903 CCDS:CCDS29308.1 GeneID:319888 MGI:2442915
definition	GO_function : GO:0016747 - transferase activity, transferring groups other than amino-acyl groups [Evidence IEA] codon_start : 1 product : hypothetical protein LOC319888 protein_id : NP_796002.1

name	Sec11c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313554 CCDS:CCDS29309.1 GeneID:66286 MGI:1913536
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008236 - serine-type peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA] codon_start : 1 product : Sec11-like 3 protein_id : NP_079744.1

name	Grp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424687 CCDS:CCDS29310.1 GeneID:225642 MGI:95833
definition	GO_component : GO:0005615 - extracellular space [Evidence ISS] GO_function : GO:0005184 - neuropeptide hormone activity [Evidence ISS] GO_process : GO:0007218 - neuropeptide signaling pathway [Evidence ISS] [Evidence IEA] codon_start : 1 product : gastrin releasing peptide protein_id : NP_778177.1

name	Rax (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89274179 CCDS:CCDS29311.1 GeneID:19434 MGI:109632
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0043010 - eye development (sensu Vertebrata) [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : eyeless 1; Rx/rax homeoprotein product : retina and anterior neural fold homeobox protein_id : NP_038861.2

name	Cplx4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703970 CCDS:CCDS29312.1 GeneID:225644 MGI:2685803
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0000149 - SNARE binding [Evidence IDA]; GO:0019905 - syntaxin binding [Evidence IEA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0046928 - regulation of neurotransmitter secretion [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : complexin IV product : complexin 4 protein_id : NP_663468.1

name	Lman1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312570 CCDS:CCDS29313.1 GeneID:70361 MGI:1917611
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005793 - ER-Golgi intermediate compartment [Evidence IDA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0030017 - sarcomere [Evidence IDA] GO_function : GO:0005529 - sugar binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence TAS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : lectin, mannose-binding, 1 protein_id : NP_081676.1

name	Ccbe1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520281 CCDS:CCDS29314.1 GeneID:320924 MGI:2445053
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 product : collagen and calcium binding EGF domains 1 protein_id : NP_848908.1

name	LOC667783 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667783
definition	number : 1 pseudo : _no_value

name	LOC667816 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667816
definition	number : 1 pseudo : _no_value

name	LOC638570 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638570
definition	number : 1 pseudo : _no_value

name	LOC638570 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638570
definition	number : 2 pseudo : _no_value

name	LOC638570 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638570
definition	number : 3 pseudo : _no_value

name	LOC638570 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638570
definition	number : 4 pseudo : _no_value

name	LOC100042820 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042820
definition	number : 1 pseudo : _no_value

name	LOC629480 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149269862 GeneID:629480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 78 ESTs, 10 Proteins product : similar to U2 snrnp auxiliary factor, small subunit pseudo : _no_value transcript_id : XR_034567.1

clone name	MSMg01-433O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338A03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-454E10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-058D14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-446C15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-166G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012G18
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-133A18.b	B6Ng01-133A18.g
ACC	DH933701	DH933702
length	1,200	1,239
definition	DH933701\|Mus musculus domesticus DNA, BAC clone: B6Ng01-133A18, 5' end.	DH933702\|Mus musculus domesticus DNA, BAC clone: B6Ng01-133A18, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattccttgtccctcttcaccaggcccctgggcctgccaaacaacagct tctgcttccgctttggctttatccggcagactggttttggcttctgctct ctctccatctacgcgattttggttggttgtgtgttcatatggaatgattt ccccgctgtcctggggatgtgggagctgtaggctagcaggttggatgtct accctctgacacgtgtttccaacaatgaattcgtttccttctacgctgga gtcagagggctctggcttctcgggccagacaccctccagctcacccctgt cgtcaatggggtccacagaggattccaggatcctagggaagttcaccgac tggttaacaacggcggggtgacgcagtatctgctgggtttcctcctgttc ctcattcagagtctcaggcatttccatctctccagttttggaaacctctg atggagagtccgtgacctctaactccttgtcctcaacagggtctacagat gactccaggaatcggggttgactcagacactgggaagacagacaattgca gtttgcttgtctgtctggtgcagcacctagccaggtgtccctgttcgctc caagggccatgagagcatcagcctgggggctgggaacccatgctgctcct cccaaggcacctggctcagatctggtggcacctgctctgaggatgtcaga cagagcccagctcctaccaggcatggtgagaccagcttctgcctccttgt acccagggtgcctcactagttctggtggccagatttcaaagacgggagct tctagagttatgatcttcactttgccgcccacagcccaactttcctagcc caacgtcatctttctctccaaggaggatgtcaggagagctgggacactga ctaccaatgactgtcttctcccacagtcttctcagccaccaccaagtcac tggtcctcgggtctgagctacactcaatttctccctggaatctgctaggg agtgctcagggttccacattggtctcctgtgcatggtgggtatggagggc aaatttctgagtcatttgcagaagagaatctggtggattgtgctctgtgg ccggatgcatgcctcattccacttcctttcttggaagttcctcaagctct gctgtgctcttcttaacctgactggaccaaggcgtgttattcatctgaag	gaattcagccctagctctagaacagagtttgctttgggctgggccttggt ggctttggtggtgtagacctgaagtgggtaggaagaagaccaagacgaaa ggcacaagtatgcgaattatcacaggaaagttgttgagctgtgctcggtt cagaagagctggaggcatacaagacaaagggcagagaccaggacaaagga aagagtcaaaacacaatatgtcacacctatggactaagtcatcataggtg ccggccccagtctctccacttccttctcagctgctgagatgtgagtaagc aacctcatgttcctgccgtagtgccagctacctcaggtgccgtacgtttc cttctcaaacagtgagtccaaggaaatccttcttcctttaagttgctgtt ggtcagtatgaaaaaaggtaagggatgcaggaaattaaaactgagaagta aagctattgcggtggtaaccctgaccatgtggctcgtatgtgtttggaag tagaacaccagaggaatatggaaagagcttagagccacagcctagcaaag ccttggtatgctgtaagctcatagttctagggtaaagggaatgtcaaggt ggtaggaatttgaaagagctaatttgagagaactagtcattttctatccc taatcaggaacagagagcactgaatgcatgcactctagtgctgagcttga tttttatgtggttcagaatcctctgcctagggaatggtgccacccacagt ggctgtgtcttcccatctcatttactgtaatcaagataatcccctgcagg catgcacactgaccaacctaatctagacagtccctcattgagactccctt cccaggtgattctagattgtttcaaattgataaaactaacaagtacaaag tgtgagagatgataggatgtcttagttactgtcctattgatgtgaagacc tagcaactcatttaaaaggaagcatttaattgggggcttgcttacagttt cagagggttagtccacgatcatcatggcagagcagagggcatggcattgg agcagcaatgagactttacatctgatcaaggcagagaagagaaggaagac ttgggcctgcctgggcttgaaacctcgatgacaactccccccaagccacc tcctaatctttcattcgctaatcactgggacagacatgcaaattcagtaa cagtggacattttatatgtccacaccacacactagagat
quality values	Open. Hide. 61 61 24 32 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 32 61 49 49 61 61 59 61 43 37 23 28 21 26 18 44 55 61 59 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 35 44 30 35 35 59 59 59 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 55 59 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 59 59 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 59 61 59 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 59 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 55 59 59 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 55 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 55 61 50 50 61 61 61 55 61 61 61 55 55 55 55 55 55 61 61 61 61 61 61 61 55 61 61 55 61 61 55 55 55 47 55 55 55 55 55 55 61 50 53 50 50 50 53 53 50 50 50 50 52 53 61 61 61 61 61 61 61 53 53 52 50 43 43 61 61 61 61 50 53 52 53 40 50 50 61 47 53 53 50 50 61 61 61 61 61 61 53 61 53 61 42 61 46 53 61 61 61 61 61 61 61 52 61 53 53 53 61 61 61 61 61 61 61 61 53 53 61 53 53 61 53 53 53 57 57 52 57 57 53 46 57 57 57 53 57 53 53 50 53 53 52 47 53 53 45 50 53 47 53 57 53 53 52 45 47 47 53 53 53 53 43 43 52 53 45 47 38 52 53 57 47 47 47 53 53 57 53 50 57 53 53 53 53 45 43 32 38 46 53 47 57 47 57 57 47 53 57 57 43 47 47 32 47 50 45 53 47 52 53 52 42 50 42 45 43 38 43 45 36 50 50 57 34 34 37 50 50 52 41 30 57 37 43 24 52 32 36 53 57 53 39 53 47 30 30 35 43 47 57 50 53 37 52 53 52 20 42 50 24 38 37 30 44 40 53 20 39 36 53 27 38 50 39 40 35 50 52 20 50 38 36 50 50 28 28 53 30 40 40 52 43 41 53 52 33 37 36 53 29 34 37 53 39 36 37 31 21 45 38 31 39 37 44 47 33 35 40 40 37 24 37 57 57 24 40 25 41 32 28 33 30 33 33 30 47 29 33 33 38 53 31 40 41 30 41 37 32 29 18 51 46 27 30 51 37 30 32 21 21 45 32 37 27 33 32 36 30 32 35 27 48 29 31 30 32 30 30 30 25 32 34 11 13 21 26 29 44 29 39 23 32 29 29 30 32 21 29 29 37 28 36 24 22 29 35 28 24 9 14 7 23 39 25 29 31 29 22 22 29 22 19 28 24 29 29 33 51 46 21 29 21 27 17 30 26 23 32 28 31 16 24 28 16 29 27 28 6 14 14 11 8 39 14 30 38 28 46 39 21 11 18 26 29 29 21 28 33 25 27 33 46 34 28 29 26 16 29 43 34 26 22 31 18 20 15 30 15 10 10 22 22 14 24 13 29 19 29 30 31 19 27 11 16 10 27 25 21 31 22 25 33 20 22 16 28 28 19 32 12 21 26 19 28 30 51 32 13 27 24 26 35 19 33 30 20 28 17 21 31 23 17 14 29 51 18 11 26 5 30 22 17 16 23 13 15 18 15 23 32 23 34 16 25 44 14 13 5 9 23 19 16 8 8 4 42 22 11 21 25 23 13 27 21 16 20 11 29 6 5 5 4 22 26 19 22 9 20 23 22 30 29 8 33 37 29 8 9 6 14 11 29 15 34 27 20 28 42 21 9 42 25 11 29 6 4 5 24 10 6 8 31 17 16 15 3 4 23 16 6 8 5 6 26 9 17 5 7 26 15 26 22 11 6 4 4 4 6 10 19 10 13 15 4 4 16 3 6 23 9 25 7 5 19 5 12 23 8 5 26 6 10 7 11 7 11 6 5 13 7 5 7 6 15 7 6 8 12 9 7 7 3 3 2 3 7 6 6 4 5 6 9 3 3 8 3 2 4 9 20 3 4 1 2 9 4 4 5 2 4 9 3 3 5 9 3 1 2 4 6 6 12 8 3 3 3 6 7 6 9 4 13 3 5 5 6 4 6 9 5 5 10 7 14 10 5	Open. Hide. 55 61 61 49 43 38 22 19 36 43 28 35 35 27 59 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 44 35 37 55 44 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 37 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 52 61 61 53 61 61 61 61 61 61 61 61 57 52 53 57 53 53 57 57 57 53 53 57 53 57 57 53 53 53 53 57 57 53 50 57 57 57 57 53 53 53 57 52 57 53 38 46 57 57 57 57 53 57 52 36 53 45 53 53 47 47 57 45 57 57 42 53 34 47 47 37 38 57 57 47 57 57 57 53 57 45 47 57 45 53 45 57 57 52 57 50 57 45 57 53 38 53 42 53 53 38 22 52 57 57 52 42 41 50 53 36 47 38 47 45 53 52 50 45 26 57 50 39 50 50 43 57 34 52 40 50 42 48 53 53 34 52 39 53 30 33 50 53 50 36 52 53 42 52 38 40 42 57 40 53 34 53 21 39 53 57 50 32 31 57 57 57 46 37 48 48 39 53 40 12 46 26 33 24 46 29 33 37 41 42 42 37 45 29 38 31 35 28 57 53 36 37 27 52 52 34 47 35 44 28 47 37 41 40 44 35 40 33 44 53 34 41 40 40 53 29 33 31 19 23 53 35 21 37 27 41 37 32 29 51 32 30 30 32 45 30 24 30 32 36 23 43 33 34 22 34 28 30 25 33 32 36 30 30 28 30 27 37 17 30 32 30 27 29 29 27 29 30 31 27 21 22 17 32 14 37 22 29 38 29 29 29 34 20 25 17 26 29 28 29 36 32 29 28 25 36 29 38 32 28 29 24 29 23 39 23 40 14 14 43 30 25 28 30 15 29 34 14 29 25 29 25 29 23 13 26 36 26 51 14 7 27 41 27 20 32 33 28 25 40 51 51 26 18 28 27 29 21 23 29 31 28 28 34 26 41 32 29 23 43 28 29 35 23 43 22 30 12 25 28 21 29 18 24 28 23 29 21 20 14 32 29 21 29 30 17 23 20 34 26 25 24 28 21 11 39 26 12 12 27 25 26 34 23 14 20 8 18 36 7 6 12 19 17 14 24 27 19 24 38 21 7 32 39 27 21 25 23 29 22 25 19 30 51 29 14 21 20 16 19 44 44 44 25 17 28 17 28 19 22 24 13 23 9 31 28 44 29 7 5 5 30 10 34 29 6 19 34 17 13 28 22 15 21 12 28 28 29 23 29 26 17 23 25 27 15 7 5 4 5 16 10 9 19 11 42 31 13 16 18 23 17 7 13 23 25 23 16 7 5 14 7 5 11 13 23 26 29 20 7 14 7 14 26 23 6 6 4 8 12 7 19 19 24 11 4 3 3 9 20 9 23 5 4 4 3 4 10 5 7 11 12 6 13 12 5 6 1 3 9 22 21 18 10 14 15 7 3 6 9 7 12 3 3 4 7 6 9 21 11 8 6 11 4 3 3 1 2 5 3 3 5 18 8 7 3 8 13 2 5 12 8 13 5 5 3 3 15 7 5 6 6 5 10 3 4 11 11 10 10 5 3 6 6 8 5 3 3 5 10 5 16 4 4 15 16 4 3 3 6 3 3 3 6 10 20 6 9 8 21 3 4 8 5 6 6 13 19 3 3 3 3 18 4 2 4 3 1 20 19 8 4 9 4 5 4 7 5 12 9 6 4 7 7 4 4 4 6 4 9 3 4 8 7 4 5 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr18_65464938_65466162
seq2: B6Ng01-133A18.b_46_1245

seq1  GAATTCCTTGTCCCTCTTCACCAGGCCCCTGGGCCTGCCAAACAACAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTCCCTCTTCACCAGGCCCCTGGGCCTGCCAAACAACAGCT  50

seq1  TCTGCTTCCGCTTTGGCTTTATCCGGCAGACTGGTTTTGGCTTCTGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCCGCTTTGGCTTTATCCGGCAGACTGGTTTTGGCTTCTGCTCT  100

seq1  CTCTCCATCTACGCGATTTTGGTTGGTTGTGTGTTCATATGGAATGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCATCTACGCGATTTTGGTTGGTTGTGTGTTCATATGGAATGATTT  150

seq1  CCCCGCTGTCCTGGGGATGTGGGAGCTGTAGGCTAGCAGGTTGGATGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCTGTCCTGGGGATGTGGGAGCTGTAGGCTAGCAGGTTGGATGTCT  200

seq1  ACCCTCTGACACGTGTTTCCAACAATGAATTCGTTTCCTTCTACGCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTGACACGTGTTTCCAACAATGAATTCGTTTCCTTCTACGCTGGA  250

seq1  GTCAGAGGGCTCTGGCTTCTCGGGCCAGACACCCTCCAGCTCACCCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGGGCTCTGGCTTCTCGGGCCAGACACCCTCCAGCTCACCCCTGT  300

seq1  CGTCAATGGGGTCCACAGAGGATTCCAGGATCCTAGGGAAGTTCACCGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAATGGGGTCCACAGAGGATTCCAGGATCCTAGGGAAGTTCACCGAC  350

seq1  TGGTTAACAACGGCGGGGTGACGCAGTATCTGCTGGGTTTCCTCCTGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAACAACGGCGGGGTGACGCAGTATCTGCTGGGTTTCCTCCTGTTC  400

seq1  CTCATTCAGAGTCTCAGGCATTTCCATCTCTCCAGTTTTGGAAACCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCAGAGTCTCAGGCATTTCCATCTCTCCAGTTTTGGAAACCTCTG  450

seq1  ATGGAGAGTCCGTGACCTCTAACTCCTTGTCCTCAACAGGGTCTACAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAGTCCGTGACCTCTAACTCCTTGTCCTCAACAGGGTCTACAGAT  500

seq1  GACTCCAGGAATCGGGGTTGACTCAGACACTGGGAAGACAGACAATTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAGGAATCGGGGTTGACTCAGACACTGGGAAGACAGACAATTGCA  550

seq1  GTTTGCTTGTCTGTCTGGTGCAGCACCTAGCCAGGTGTCCCTGTTCGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTGTCTGTCTGGTGCAGCACCTAGCCAGGTGTCCCTGTTCGCTC  600

seq1  CAAGGGCCATGAGAGCATCAGCCTGGGGGCTGGGAACCCATGCTGCTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCCATGAGAGCATCAGCCTGGGGGCTGGGAACCCATGCTGCTCCT  650

seq1  CCCAAGGCACCTGGCTCAGATCTGGTGGCACCTGCTCTGAGGATGTCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGCACCTGGCTCAGATCTGGTGGCACCTGCTCTGAGGATGTCAGA  700

seq1  CAGAGCCCAGCTCCTACCAGGCATGGTGAGACCAGCTTCTGCCTCCTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCCAGCTCCTACCAGGCATGGTGAGACCAGCTTCTGCCTCCTTGT  750

seq1  ACCCAGGGTGCCTCACTAGTTCTGGTGGCCAGATTTCAAAGACGGGAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGGTGCCTCACTAGTTCTGGTGGCCAGATTTCAAAGACGGGAGCT  800

seq1  TCTAGAGTTATGATCTTCACTTTGCCGCCCACAGCCCAAC-TTCCTAGCC  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTAGAGTTATGATCTTCACTTTGCCGCCCACAGCCCAACTTTCCTAGCC  850

seq1  CAACGTCATCTTTCTCTCCAAGGAGGATGTCAGGGAGAGCTGGGACACTG  899
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAACGTCATCTTTCTCTCCAAGGAGGATGTCA-GGAGAGCTGGGACACTG  899

seq1  ACTACCAAATGACTGTCTTCTCCCACAGTCTTCTCAGCCACCACCAAGTC  949
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACC-AATGACTGTCTTCTCCCACAGTCTTCTCAGCCACCACCAAGTC  948

seq1  ACTGGTCCTCGGGTCTGAGCTACACTCAATTTCTTCCCTGGAATCTGCTA  999
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACTGGTCCTCGGGTCTGAGCTACACTCAATTTC-TCCCTGGAATCTGCTA  997

seq1  GGGAGTGCTCCAAGGGTTCCACATTGGTCTCCTGTTGCATGGTGGGTATG  1049
      ||||||||||  |||||||||||||||||||||| |||||||||||||||
seq2  GGGAGTGCTC--AGGGTTCCACATTGGTCTCCTG-TGCATGGTGGGTATG  1044

seq1  GAGGGCAAAATTTCTTGGAAGTCATTTGCAGAAAGAGAAACCTGGTGGGA  1099
      |||||| ||||||||    |||||||||||| ||||| || |||||||  
seq2  GAGGGC-AAATTTCT---GAGTCATTTGCAG-AAGAG-AATCTGGTGGAT  1088

seq1  TGTGCTCTGTGGCCGGATGCCATGCTTCATTCCACTTCCCTTTTCTTGGA  1149
      ||||||||||||||||||| ||||| |||||||||||||  |||||||||
seq2  TGTGCTCTGTGGCCGGATG-CATGCCTCATTCCACTTCC--TTTCTTGGA  1135

seq1  AGTGCTCCTCAAGGCCTCTGCTGTGGGCTCCCTCCATAGCCTGGCTCTGA  1199
      |||  ||||||||  ||||||||||    | || | || |||| ||  ||
seq2  AGT--TCCTCAAG--CTCTGCTGTG----CTCTTCTTAACCTGACT-GGA  1176

seq1  CACACAGGCTGGTTATCCATCTGAAG  1225
      | || ||||  ||||| |||||||||
seq2  C-CA-AGGCGTGTTATTCATCTGAAG  1200

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information