BAC Information

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BAC

Clone NameB6Ng01-133G06
Chromosome18 (Build37)
Map Location 71,032,965 - 71,174,884
singlet/doubletdoublet
Overlap genenone
Upstream geneCcdc68, Rab27b, 2310002L13Rik, 4930503L19Rik, Stard6, Poli, Mbd2, EG668032
Downstream geneDcc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133G06.bB6Ng01-133G06.g
ACCDH933949DH933950
length1,0521,125
definitionDH933949|Mus musculus domesticus DNA, BAC clone: B6Ng01-133G06, 5' end.DH933950|Mus musculus domesticus DNA, BAC clone: B6Ng01-133G06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,173,833 - 71,174,884)(71,032,965 - 71,034,107)
sequence
gaattctgcataaactccaacaaggtgcattctcttcctatttgactcta
acctattatagcagttagaaagactacccaaagcaaatatttccagtgtc
tgtggagccagtattctgctcctgagggcttggccagcctggttcaagct
agcatgaaaatgatacctgtggttgccccatttagggtcaactataccta
tcattaaattacatctcttttagcaaggacttcacaggagtctaggctgt
cagttttgaattcctggtttagtgctccatatgctaaagagctgtaggtt
gatcacattttaccctctttataattctgaattcagagaggggtacttaa
ctacatgcctatgtaaactttgcatccacagaaatgtcttcatagcttgg
gggttggcgtaagcgccctattaatcaaagcatccagtctctacctttct
ctttccattatgcaattgattttcctccatcacaagattccctggcctta
tggtttgtttgtttgtttgtttgttcgttcctttgttttttcctgattga
catctttgccaatgtatttccagctactgtttacctaaccttttagattt
tcacttggtctcttgtgtgttattttcatctttacctaattctcagggta
atatcatgaatgtaactgcgtctgtgtcacagatcattgtgggcatctta
ccccctcttttctgattgctgagaaagttcaacccagcctttgactagag
ttgccacttgctatttgctggtgagtttagcttgactctgtgtgtcttgt
ttctcctagaaagagacttattacatatcccagcatatggtagcatggaa
catgtcaaccgaaatggatggtatctgaagattgtgggtcagatttttgt
gtagtctcacagtctacattaaaattcttagctccaagtatgggtgccca
gaaggactttaaggttattattaagtttagctttagatcataagattgga
gttctcatggaggtttcatggccttagaagaagcagaggaggaggaggat
ga
gaattctaaggaggcaagttattgagtttggagttgccattaagaggcag
accaaagccagtcacaccatcttgcttgtcaggtaagaagattgttcctc
ttttggtatagcattggaaatggaaatgagctaaatacctaataaaaaaa
aatgaaaaaaaaaaaaaaaaaaaaaaagaagattgttcctgattgaaaag
gcaaaaattaaaaccagaggtttgcagtggagaaagtgacatagtccaga
caccccattatcaacctccaagttcttggatctctggccatatctaaagt
ctacccccatttgtgaattttccagatataggaactcatttttgttctcc
acccccagactaaatgaggtttatattacaagactaacacgatcagtagc
tggggaataggaagaacttcatttcactctccttaggcttattagagatg
catttctgattgttaccaatacatcaggaaagccatcaatacaattagtc
tcaaatactacatgcattacatggtatatactttctaaagttgcatccag
ttctaaggaggtattcataaaataaatggttatgatgagaggataggcta
attaaataatttttgttgaggctgtgcaagaccttgggtgcttctcttag
cactttgtgcacataggcacctgtacatgtgcatacatatgtatacacac
acaaacacacaatgtaaaccatgtgtgcattcacacttgcatagaccgtt
taaataactgtttccatcatgactgcctttgttgaaacgagtactagttt
ttgactttttatattcaacacagattttctattagtactcatctctattt
ttcttccttttaatacccaagaggctaaaagcctgaatgcttggccaatg
ggtttcagtcacttttatattactgaggtatgagcgtcatttgagctctg
gaaggaatttgaagacagctctcctattccagacagctatgagaagtcag
gtgggtgcccagaggcagcatgctgcttggtgtgggtttactacctctag
tcattccctcagaagttagacattctcattttaaaatttcaatgatgtct
gcatgataagaaacatgtgttgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_71173833_71174884
seq2: B6Ng01-133G06.b_47_1098 (reverse)

seq1  TCCTCCTCCTCCTCCTCTGCCTTCTTCTAAGGCCATGAAACCTCCATGAG  50
      || |||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCATCCTCCTCCTCCTCTG-CTTCTTCTAAGGCCATGAAACCTCCATGAG  49

seq1  AACTCCAATCTTATGATCTAAAGCTAAACTTAATAATAACC-TAAAGTCC  99
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AACTCCAATCTTATGATCTAAAGCTAAACTTAATAATAACCTTAAAGTCC  99

seq1  TTCTGTGCA-CCATACTTGGAGCTAAGAATTTTTAATGTAGACTGTGAGA  148
      ||||| ||| ||||||||||||||||||| ||||||||||||||||||||
seq2  TTCTGGGCACCCATACTTGGAGCTAAGAA-TTTTAATGTAGACTGTGAGA  148

seq1  CTACACAAATATCTGACCCACAATCTTCAGATACCATCCATTTCGGTTGA  198
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAAAAATCTGACCCACAATCTTCAGATACCATCCATTTCGGTTGA  198

seq1  CATGTTCCATGCTACCATATGCTGGGATATGTAATAAGTCTCTTTCTAGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCCATGCTACCATATGCTGGGATATGTAATAAGTCTCTTTCTAGG  248

seq1  AGAAACAAGACACACAGAGTCAAGCTAAACTCACCAGCAAATAGCAAGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAAGACACACAGAGTCAAGCTAAACTCACCAGCAAATAGCAAGTG  298

seq1  GCAACTCTAGTCAAAGGCTGGGTTGAACTTTCTCAGCAATCAGAAAAGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTCTAGTCAAAGGCTGGGTTGAACTTTCTCAGCAATCAGAAAAGAG  348

seq1  GGGGTAAGATGCCCACAATGATCTGTGACACAGACGCAGTTACATTCATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAAGATGCCCACAATGATCTGTGACACAGACGCAGTTACATTCATG  398

seq1  ATATTACCCTGAGAATTAGGTAAAGATGAAAATAACACACAAGAGACCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACCCTGAGAATTAGGTAAAGATGAAAATAACACACAAGAGACCAA  448

seq1  GTGAAAATCTAAAAGGTTAGGTAAACAGTAGCTGGAAATACATTGGCAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAATCTAAAAGGTTAGGTAAACAGTAGCTGGAAATACATTGGCAAA  498

seq1  GATGTCAATCAGGAAAAAACAAAGGAACGAACAAACAAACAAACAAACAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAATCAGGAAAAAACAAAGGAACGAACAAACAAACAAACAAACAA  548

seq1  ACCATAAGGCCAGGGAATCTTGTGATGGAGGAAAATCAATTGCATAATGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAAGGCCAGGGAATCTTGTGATGGAGGAAAATCAATTGCATAATGG  598

seq1  AAAGAGAAAGGTAGAGACTGGATGCTTTGATTAATAGGGCGCTTACGCCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAAGGTAGAGACTGGATGCTTTGATTAATAGGGCGCTTACGCCA  648

seq1  ACCCCCAAGCTATGAAGACATTTCTGTGGATGCAAAGTTTACATAGGCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAAGCTATGAAGACATTTCTGTGGATGCAAAGTTTACATAGGCAT  698

seq1  GTAGTTAAGTACCCCTCTCTGAATTCAGAATTATAAAGAGGGTAAAATGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTAAGTACCCCTCTCTGAATTCAGAATTATAAAGAGGGTAAAATGT  748

seq1  GATCAACCTACAGCTCTTTAGCATATGGAGCACTAAACCAGGAATTCAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAACCTACAGCTCTTTAGCATATGGAGCACTAAACCAGGAATTCAAA  798

seq1  ACTGACAGCCTAGACTCCTGTGAAGTCCTTGCTAAAAGAGATGTAATTTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACAGCCTAGACTCCTGTGAAGTCCTTGCTAAAAGAGATGTAATTTA  848

seq1  ATGATAGGTATAGTTGACCCTAAATGGGGCAACCACAGGTATCATTTTCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGGTATAGTTGACCCTAAATGGGGCAACCACAGGTATCATTTTCA  898

seq1  TGCTAGCTTGAACCAGGCTGGCCAAGCCCTCAGGAGCAGAATACTGGCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCTTGAACCAGGCTGGCCAAGCCCTCAGGAGCAGAATACTGGCTC  948

seq1  CACAGACACTGGAAATATTTGCTTTGGGTAGTCTTTCTAACTGCTATAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACACTGGAAATATTTGCTTTGGGTAGTCTTTCTAACTGCTATAAT  998

seq1  AGGTTAGAGTCAAATAGGAAGAGAATGCACCTTGTTGGAGTTTATGCAGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGAGTCAAATAGGAAGAGAATGCACCTTGTTGGAGTTTATGCAGA  1048

seq1  ATTC  1052
      ||||
seq2  ATTC  1052

seq1: chr18_71032965_71034107
seq2: B6Ng01-133G06.g_68_1192

seq1  GAATTCTAAGGAGGCAAGTTATTGAGTTTGGAGTTGCCATTAAGAGGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGGAGGCAAGTTATTGAGTTTGGAGTTGCCATTAAGAGGCAG  50

seq1  ACCAAAGCCAGTCACACCATCTTGCTTGTCAGGTAAGAAGATTGTTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGCCAGTCACACCATCTTGCTTGTCAGGTAAGAAGATTGTTCCTC  100

seq1  TTTTGGTATAGCATTGGAAATGGAAATGAGCTAAATACCTAATAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTATAGCATTGGAAATGGAAATGAGCTAAATACCTAATAAAAAAA  150

seq1  AATGAAAAAAAAAAAAAAAAAAAAAAAGAAGATTGTTCCTGATTGAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAAAAAAAAAAAAAAAAAAAAAGAAGATTGTTCCTGATTGAAAAG  200

seq1  GCAAAAATTAAAACCAGAGGTTTGCAGTGGAGAAAGTGACATAGTCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAATTAAAACCAGAGGTTTGCAGTGGAGAAAGTGACATAGTCCAGA  250

seq1  CACCCCATTATCAACCTCCAAGTTCTTGGATCTCTGGCCATATCTAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCATTATCAACCTCCAAGTTCTTGGATCTCTGGCCATATCTAAAGT  300

seq1  CTACCCCCATTTGTGAATTTTCCAGATATAGGAACTCATTTTTGTTCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCCCATTTGTGAATTTTCCAGATATAGGAACTCATTTTTGTTCTCC  350

seq1  ACCCCCAGACTAAATGAGGTTTATATTACAAGACTAACACGATCAGTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAGACTAAATGAGGTTTATATTACAAGACTAACACGATCAGTAGC  400

seq1  TGGGGAATAGGAAGAACTTCATTTCACTCTCCTTAGGCTTATTAGAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAATAGGAAGAACTTCATTTCACTCTCCTTAGGCTTATTAGAGATG  450

seq1  CATTTCTGATTGTTACCAATACATCAGGAAAGCCATCAATACAATTAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGATTGTTACCAATACATCAGGAAAGCCATCAATACAATTAGTC  500

seq1  TCAAATACTACATGCATTACATGGTATATACTTTCTAAAGTTGCATCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATACTACATGCATTACATGGTATATACTTTCTAAAGTTGCATCCAG  550

seq1  TTCTAAGGAGGTATTCATAAAATAAATGGTTATGATGAGAGGATAGGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGGAGGTATTCATAAAATAAATGGTTATGATGAGAGGATAGGCTA  600

seq1  ATTAAATAATTTTTGTTGAGGCTGTGCAAGACCTTGGGTGCTTCTCTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATAATTTTTGTTGAGGCTGTGCAAGACCTTGGGTGCTTCTCTTAG  650

seq1  CACTTTGTGCACATAGGCACCTGTACATGTGCATACATATGTATACACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGTGCACATAGGCACCTGTACATGTGCATACATATGTATACACAC  700

seq1  ACAAACACACAATGTAAACCATGTGTGCATTCACACTTGCATAGACCGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACACAATGTAAACCATGTGTGCATTCACACTTGCATAGACCGTT  750

seq1  TAAATAACTGTTTCCATCATGACTGCCTTTGTTGAAACGAGTACTAGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAACTGTTTCCATCATGACTGCCTTTGTTGAAACGAGTACTAGTTT  800

seq1  TTGACTTTTTATATTCAACACAGATTTTCTATTAGTACTCATCTCTATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTTTTATATTCAACACAGATTTTCTATTAGTACTCATCTCTATTT  850

seq1  TTCTTCCTTTTAATACCCAAGAGGCTAAAAGCCTGAATGCTTGGCCAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTTTTAATACCCAAGAGGCTAAAAGCCTGAATGCTTGGCCAATG  900

seq1  GGTTCCAGTCACTTTTATATTACTGAGGTATGAGCGTCATTTGAGCTCTG  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCAGTCACTTTTATATTACTGAGGTATGAGCGTCATTTGAGCTCTG  950

seq1  GAAGGAATTTGGAAGGAACAAGCTCTCCTATTCCAGGACCAGCTATGAGA  1000
      |||||||||| ||||  || ||||||||||||||||   |||||||||||
seq2  GAAGGAATTT-GAAG--AC-AGCTCTCCTATTCCAG--ACAGCTATGAGA  994

seq1  AGTCAGGTGGGTGGCCCCAGAGGGCAGCATTGCTGCTTGGGTGTGGGTTT  1050
      |||||||||||||  |||||| ||||||| |||||||| |||||||| ||
seq2  AGTCAGGTGGGTG--CCCAGA-GGCAGCA-TGCTGCTT-GGTGTGGG-TT  1038

seq1  TACCTACTCTAGTCATTCACTCAAGAAAGGTTAAGACCATTCTCATTTTA  1100
      |||   |||||||||||| ||| ||||  ||| ||| |||||||||||||
seq2  TACTACCTCTAGTCATTCCCTC-AGAA--GTT-AGA-CATTCTCATTTTA  1083

seq1  AAATTTCAATGATGTCTGCATGAATACAGAACATGTGTTGATA  1143
      |||||||||||||||||||||| |||   ||||||||||||||
seq2  AAATTTCAATGATGTCTGCATG-ATAAGAAACATGTGTTGATA  1125