BAC Information

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BAC

Clone NameB6Ng01-133K20
Chromosome18 (Build37)
Map Location 85,887,926 - 85,889,159
singlet/doubletsinglet
Overlap genenone
Upstream geneB230399E16Rik, Cyb5, Fbxo15, 1700034H14Rik, LOC100039765, LOC665382
Downstream geneLOC545269, LOC545270, LOC665402, Neto1, Cbln2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133K20.bB6Ng01-133K20.g
ACCDH934164DH934165
length1,207635
definitionDH934164|Mus musculus domesticus DNA, BAC clone: B6Ng01-133K20, 5' end.DH934165|Mus musculus domesticus DNA, BAC clone: B6Ng01-133K20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgatgttcatcttagagacatataattataaccctagcttaaaa
taaccattttttaaaaagttagtcattttctttaccaatttctttcttca
ttaagtgacatgtctgggcagttaagttataaataaaacctatcataaat
tgttcaattacaaggaaataaatctagttatcaatacattacaaactgta
aggaatatacttgctttccttctccaatctgagttcataagtatagagca
ggtattttatacaagaaaattatcaatgaaacttaaggtttagcatttct
tactattaagacaagcatttttattgaatttgatactataaacctaatgg
cactctcaagactataaactatgcctgagtatgatttgacttttctctct
cagaatatagtaacttttgatattttactttttaaatatattatgttcat
atgtgtatttcatattcatgtagatatatttgggtccacacatgtgtgtg
taagagcactcagaggctagaagaggccctcaggtcctctagaactggag
gtaaatgtggttgtgagccacctgattccgaagatgggccctgaacttca
gtaatctgaaagggctcagagtgatttaaactgttggaccgtctcttcaa
cctagggattttctttctacaaaaatataagaaaggtttttagtattctc
cacatttgataatcatattatcctagacaaatcactcaatcataaggcac
agatggaatattgtattctactgactagggactctcagtgatttattgtc
tggcaagttttattttgttttaaattaaagaaagaaagatgattgtgcca
atcatagaaatgtatttacttacaagagacataaagttgccttgtttttc
tcatttactctggggacagacacagatatatttaattaagaagttgcgtg
ctggttttttagttttctgcatgagaggtaatttacagatagctcactgc
tgagcaggaccacatctctacataaaatgagtctagacccaaactgctcg
taattgcactgctacactaataagcacattgcagtcacaaaaaaagttac
tgcagcataaaactgggatatagggccaaatatatgagttcaggaaaggc
agcatccagtgaagccctgttctcaaccatcagcacgtccgaatagaatt
tttgtga

gaattctcacctgaggaatactgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcatatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgttggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaatcactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaagaatgacaattttattcgatttta
tttagttagagagagtcctgtgcctcaggctgccttagtcccactatgta
gtagaagcaggccttgtatgcttgctctttccacctctacttctcaactc
catggattacaggatgttttagccactgctctactgctgtgaagagacat
catgaccatgcctatatttcttgtaaaggaaagcattaaatgggggcttg
ctaacagtgcagaggtttaccattgccatcatggcacaaagcatggtggc
aagcacacaggcatggtgatgaaggaggaactgagagttctacatccaaa
taagcagacagcaggaagagaggggtggggaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_85887926_85889159
seq2: B6Ng01-133K20.b_48_1254 (reverse)

seq1  TCACAAAAATTCTATATTTAGAAACGCTGCTTGATTGTTTGAG-ACAGGG  49
      ||||||||||||||   || |  ||| ||| ||| || ||||| ||||||
seq2  TCACAAAAATTCTA---TTCG-GACG-TGC-TGA-TGGTTGAGAACAGGG  43

seq1  CTTCTACTTGATTGCTGGCTTTTCTTTGAACTCATATTATTTCTGCCTCT  99
      |||| ||| || ||||| |||| |  |||||||||| ||||  || | ||
seq2  CTTC-ACTGGA-TGCTGCCTTTCC--TGAACTCATA-TATT--TGGCCCT  86

seq1  ATATCCCAAGTTTTTGTTGCTGCAGTTTACTTTTTTTGTGACTGCAATGT  149
      ||||||| ||||||   |||||||| | ||||||||||||||||||||||
seq2  ATATCCC-AGTTTT--ATGCTGCAG-TAACTTTTTTTGTGACTGCAATGT  132

seq1  GGCTTATTTAGTGTAGCAGGTGCAATTACGAGCAGTTTGGGTTCTAAGAC  199
       ||||| ||||||||||| |||||||||||||||||||||| ||| ||||
seq2  -GCTTA-TTAGTGTAGCA-GTGCAATTACGAGCAGTTTGGG-TCT-AGAC  177

seq1  TCATTTTATGTTAGAGATGTTGGTCCTGCCTCAGCAGTGAGCTTATCTGT  249
      |||||||||| |||||||| |||||||| ||||||||||||| |||||||
seq2  TCATTTTATG-TAGAGATG-TGGTCCTG-CTCAGCAGTGAGC-TATCTGT  223

seq1  AAATTACCTCTCATGCAGAAAACTAAAAAACCAGCACGCAACTTCTTAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACCTCTCATGCAGAAAACTAAAAAACCAGCACGCAACTTCTTAAT  273

seq1  TAAATATATTCTGTGTCTGTCCCCAGGGTAAATGAGAAAAACAAGGCAAC  349
      |||||||| ||||||||||||||||| |||||||||||||||||||||||
seq2  TAAATATA-TCTGTGTCTGTCCCCAGAGTAAATGAGAAAAACAAGGCAAC  322

seq1  TTTATGTCTCTTGTAAGTAAATACATTTCTATGATTGGCACAATCATCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTCTCTTGTAAGTAAATACATTTCTATGATTGGCACAATCATCTT  372

seq1  TCTTTCTTTAAATTAAAACAAAATAAAACTTGCCAGACAATAAATCACTG  449
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTAATTTAAAACAAAATAAAACTTGCCAGACAATAAATCACTG  422

seq1  AGAGTCCCTAGTCAGTAGAATACAATATTCCATCTGTGCCTTATGATTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCCTAGTCAGTAGAATACAATATTCCATCTGTGCCTTATGATTGA  472

seq1  GTGATTTGTCTAGGATAATATGATTATCAAATGTGGAGAATACTAAAAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTGTCTAGGATAATATGATTATCAAATGTGGAGAATACTAAAAAC  522

seq1  CTTTCTTATATTTTTGTAGAAAGAAAATCCCTAGGTTGAAGAGACGGTCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTATATTTTTGTAGAAAGAAAATCCCTAGGTTGAAGAGACGGTCC  572

seq1  AACAGTTTAAATCACTCTGAGCCCTTTCAGATTACTGAAGTTCAGGGCCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTAAATCACTCTGAGCCCTTTCAGATTACTGAAGTTCAGGGCCC  622

seq1  ATCTTCGGAATCAGGTGGCTCACAACCACATTTACCTCCAGTTCTAGAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCGGAATCAGGTGGCTCACAACCACATTTACCTCCAGTTCTAGAGG  672

seq1  ACCTGAGGGCCTCTTCTAGCCTCTGAGTGCTCTTACACACACATGTGTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGGGCCTCTTCTAGCCTCTGAGTGCTCTTACACACACATGTGTGG  722

seq1  ACCCAAATATATCTACATGAATATGAAATACACATATGAACATAATATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAATATATCTACATGAATATGAAATACACATATGAACATAATATAT  772

seq1  TTAAAAAGTAAAATATCAAAAGTTACTATATTCTGAGAGAGAAAAGTCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGTAAAATATCAAAAGTTACTATATTCTGAGAGAGAAAAGTCAA  822

seq1  ATCATACTCAGGCATAGTTTATAGTCTTGAGAGTGCCATTAGGTTTATAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACTCAGGCATAGTTTATAGTCTTGAGAGTGCCATTAGGTTTATAG  872

seq1  TATCAAATTCAATAAAAATGCTTGTCTTAATAGTAAGAAATGCTAAACCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATTCAATAAAAATGCTTGTCTTAATAGTAAGAAATGCTAAACCT  922

seq1  TAAGTTTCATTGATAATTTTCTTGTATAAAATACCTGCTCTATACTTATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTCATTGATAATTTTCTTGTATAAAATACCTGCTCTATACTTATG  972

seq1  AACTCAGATTGGAGAAGGAAAGCAAGTATATTCCTTACAGTTTGTAATGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGATTGGAGAAGGAAAGCAAGTATATTCCTTACAGTTTGTAATGT  1022

seq1  ATTGATAACTAGATTTATTTCCTTGTAATTGAACAATTTATGATAGGTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATAACTAGATTTATTTCCTTGTAATTGAACAATTTATGATAGGTTT  1072

seq1  TATTTATAACTTAACTGCCCAGACATGTCACTTAATGAAGAAAGAAATTG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATAACTTAACTGCCCAGACATGTCACTTAATGAAGAAAGAAATTG  1122

seq1  GTAAAGAAAATGACTAACTTTTTAAAAAATGGTTATTTTAAGCTAGGGTT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAAAATGACTAACTTTTTAAAAAATGGTTATTTTAAGCTAGGGTT  1172

seq1  ATAATTATATGTCTCTAAGATGAACATCAGAATTC  1234
      |||||||||||||||||||||||||||||||||||
seq2  ATAATTATATGTCTCTAAGATGAACATCAGAATTC  1207


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