BAC Information

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BAC

Clone NameB6Ng01-134B14
Chromosome18 (Build37)
Map Location 15,319,127 - 15,510,518
singlet/doubletdoublet
Overlap geneLOC100040151
Upstream geneLOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1, EG622268
Downstream geneAqp4, LOC665473, Chst9, LOC670012, LOC100040551, EG225228, LOC100040202, Ppia-ps18_172.1, EG665509
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134B14.bB6Ng01-134B14.g
ACCDH934481DH934482
length1,161972
definitionDH934481|Mus musculus domesticus DNA, BAC clone: B6Ng01-134B14, 5' end.DH934482|Mus musculus domesticus DNA, BAC clone: B6Ng01-134B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,509,356 - 15,510,518)(15,319,127 - 15,320,092)
sequence
gaattctcaaccactgccaccttttgtacggaaatcagaggatgttctca
tgtaactcacactaaaggcaggcgccagaatgcagctaggtggcctcaca
gaggacagaacgttgggtaggcagcaccacctaatggctactggacagcc
tgtaccaccaccttgagaatatgggctgctcctttttcagacagatgtgt
ttgagttataggcagaacaggcatctgtgatgttatttttaaaccaatgt
ccaatgaggcgtattgcctggaccacctcctcaggtgctggtgggaatag
aactggacaatgtgaagattcttggagctaatagcaaccacttggtgttt
gctgatggactcaaagccccaccacagataagaatctaccacgtgttctg
ctcaagtcaccttttataatttatgctgtagctgaagaaaacagaaataa
atgccttagaatagaggctgctgagaaaatgtcttagcacctgcccaaac
ctcaaggggaatctacactagattctttttcctaagggtaacttcaaaga
agatgaagaagacaagagtggggtttcctccttctcattgctaaccatgg
acctgaggaaatgcttagctttttccagtctcactgtgaattgacataat
ctgaaataatccagacccttgtgtacccacaggagcaaagcatgttattt
tattgggctaatccattaaaacattcaattccattactagcacataattt
ttctgaaaagaagaacctttcctccaccaccaccatgaccatcaccctct
cctactgctgttgaatctggttttttgctttggggttcagctctttgatt
tttttcccctaactgagtctcgacttgcttaccgtgctctcatcagcatc
ctggtgttctgggttcatgcattcactctatgccctccctctcgtgttca
atcttagactattcagccaggcatctgggttgtatttgctttgtaacttc
acagacagagtcttagtatgtagcctaagctgaatgggattagtttttat
ccttttgccaaagtctcttttatgtcttggggctgcaggcatgtgacacc
accattctggaatgccattcctcgtttgatcagttgtggacgggggccct
gctgagaacaa
gaattcaaggccatcctacgactttatctcaaaaatatggctgtagagat
ggtttagcagttaagagtccccactgctcttccagacgccctgagtttgg
ttcccccacacccatgttagtagctcacaaccacctgtaatccagctcaa
aggtatgaggtgccctcttccggcctctgaagataaccatggacatgtgg
catacactcacacagatacatagatgcacataaattaaaataatatgcct
taaaaaaagttctcggccgggcatggtggcacacgcctttagtcccagca
ctcggaaggcagaggcaggcggatttctgagttctaggccagcctggtct
acaaagtgagttccaggacagccaggagttccaggacagccagggctata
cagagaaaccctgtctcaaaaaaaaaaaaaaaaaaaaaaaagttctccac
acagcgtgcttgtgatctcagtactcagaagtggagggagtgggttggaa
atttcagatcattcttgactgcataataagttctaggccagcctgggcta
caggagaccctgtctctcccacctatgtatgctcccctaaaaaatacaga
aagggaaggaaagaagggagaaagtgaggaatgaaggaatgacaaaggaa
aagattgcaggtcacacaaacacaaacctgaaaggactgagagataaccc
agcctatggggggaaacttaggaaaaaatattaaagagattatttgtcat
cttaagggacagaacacacacaagcagctggcttctcttcaaggtttggg
ggtccaaggagcaatagctgaatggccgtgggtcctgttcagcactgctc
ccttccctgggaccctagaattctcacctctggagagccacaggagctga
cgaagattgcagtgtagcctgcggtgccatcagggcttttagacagtggt
ttacagaattcagttctttacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_15509356_15510518
seq2: B6Ng01-134B14.b_47_1207 (reverse)

seq1  TTGTTCTCTAGCAGGGCTCACTGTTCACAACATGGATCAAAACGA-GAAT  49
      |||||||| |||||||| | | || ||||||   |||| |||||| ||||
seq2  TTGTTCTC-AGCAGGGC-CCCCGTCCACAAC--TGATC-AAACGAGGAAT  45

seq1  GGCA-TCCAGA--TGTGGTGTCACATGCCTGCAGCCCC-AGCATTAAAGG  95
      |||| ||||||   |||||||||||||||||||||||| ||   |||| |
seq2  GGCATTCCAGAATGGTGGTGTCACATGCCTGCAGCCCCAAGACATAAAAG  95

seq1  AGACTTTGGCAAAAGGAT-AAAACATATCCCA-TCAGCCTAGGCTACATA  143
      |||||||||||||||||| |||||  |||||| ||||| |||||||||||
seq2  AGACTTTGGCAAAAGGATAAAAACTAATCCCATTCAGCTTAGGCTACATA  145

seq1  CTAAGACTCTGTCTGTGAAGTTACAAAGCAAATACAACCCAAGATGCCTG  193
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTAAGACTCTGTCTGTGAAGTTACAAAGCAAATACAACCC-AGATGCCTG  194

seq1  GCTGGAATAGTCTAAGATTGAACACGAGAAGGGAGGGCATAGAGGTGAAT  243
      ||| |||||||||||||||||||||||| |||||||||||||| ||||||
seq2  GCT-GAATAGTCTAAGATTGAACACGAG-AGGGAGGGCATAGA-GTGAAT  241

seq1  GCATGAACCCAGAACACCAGGATGCTGATGAGAGCACGGTAAGCAAGTCG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAACCCAGAACACCAGGATGCTGATGAGAGCACGGTAAGCAAGTCG  291

seq1  AGACTCAGTTAGGGGAAAAAAATCAAAGAGCTGAACCCCAAAGCAAAAAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAGTTAGGGGAAAAAAATCAAAGAGCTGAACCCCAAAGCAAAAAA  341

seq1  CCAGATTCAACAGCAGTAGGAGAGGGTGATGGTCATGGTGGTGGTGGAGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTCAACAGCAGTAGGAGAGGGTGATGGTCATGGTGGTGGTGGAGG  391

seq1  AAAGGTTCTTCTTTTCAGAAAAATTATGTGCTAGTAATGGAATTGAATGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTCTTCTTTTCAGAAAAATTATGTGCTAGTAATGGAATTGAATGT  441

seq1  TTTAATGGATTAGCCCAATAAAATAACATGCTTTGCTCCTGTGGGTACAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGGATTAGCCCAATAAAATAACATGCTTTGCTCCTGTGGGTACAC  491

seq1  AAGGGTCTGGATTATTTCAGATTATGTCAATTCACAGTGAGACTGGAAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTCTGGATTATTTCAGATTATGTCAATTCACAGTGAGACTGGAAAA  541

seq1  AGCTAAGCATTTCCTCAGGTCCATGGTTAGCAATGAGAAGGAGGAAACCC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGCATTTCCTCAGGTCCATGGTTAGCAATGAGAAGGAGGAAACCC  591

seq1  CACTCTTGTCTTCTTCATCTTCTTTGAAGTTACCCTTAGGAAAAAGAATC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTGTCTTCTTCATCTTCTTTGAAGTTACCCTTAGGAAAAAGAATC  641

seq1  TAGTGTAGATTCCCCTTGAGGTTTGGGCAGGTGCTAAGACATTTTCTCAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTAGATTCCCCTTGAGGTTTGGGCAGGTGCTAAGACATTTTCTCAG  691

seq1  CAGCCTCTATTCTAAGGCATTTATTTCTGTTTTCTTCAGCTACAGCATAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCTATTCTAAGGCATTTATTTCTGTTTTCTTCAGCTACAGCATAA  741

seq1  ATTATAAAAGGTGACTTGAGCAGAACACGTGGTAGATTCTTATCTGTGGT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAAAGGTGACTTGAGCAGAACACGTGGTAGATTCTTATCTGTGGT  791

seq1  GGGGCTTTGAGTCCATCAGCAAACACCAAGTGGTTGCTATTAGCTCCAAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTTGAGTCCATCAGCAAACACCAAGTGGTTGCTATTAGCTCCAAG  841

seq1  AATCTTCACATTGTCCAGTTCTATTCCCACCAGCACCTGAGGAGGTGGTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCACATTGTCCAGTTCTATTCCCACCAGCACCTGAGGAGGTGGTC  891

seq1  CAGGCAATACGCCTCATTGGACATTGGTTTAAAAATAACATCACAGATGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAATACGCCTCATTGGACATTGGTTTAAAAATAACATCACAGATGC  941

seq1  CTGTTCTGCCTATAACTCAAACACATCTGTCTGAAAAAGGAGCAGCCCAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTGCCTATAACTCAAACACATCTGTCTGAAAAAGGAGCAGCCCAT  991

seq1  ATTCTCAAGGTGGTGGTACAGGCTGTCCAGTAGCCATTAGGTGGTGCTGC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAAGGTGGTGGTACAGGCTGTCCAGTAGCCATTAGGTGGTGCTGC  1041

seq1  CTACCCAACGTTCTGTCCTCTGTGAGGCCACCTAGCTGCATTCTGGCGCC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCAACGTTCTGTCCTCTGTGAGGCCACCTAGCTGCATTCTGGCGCC  1091

seq1  TGCCTTTAGTGTGAGTTACATGAGAACATCCTCTGATTTCCGTACAAAAG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTAGTGTGAGTTACATGAGAACATCCTCTGATTTCCGTACAAAAG  1141

seq1  GTGGCAGTGGTTGAGAATTC  1163
      ||||||||||||||||||||
seq2  GTGGCAGTGGTTGAGAATTC  1161

seq1: chr18_15319127_15320092
seq2: B6Ng01-134B14.g_68_1039

seq1  GAATTCAAGGCCATCCTACGACTTTATCTCAAAAATATGGCTGTAGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCATCCTACGACTTTATCTCAAAAATATGGCTGTAGAGAT  50

seq1  GGTTTAGCAGTTAAGAGTCCCCACTGCTCTTCCAGACGCCCTGAGTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGCAGTTAAGAGTCCCCACTGCTCTTCCAGACGCCCTGAGTTTGG  100

seq1  TTCCCCCACACCCATGTTAGTAGCTCACAACCACCTGTAATCCAGCTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCACACCCATGTTAGTAGCTCACAACCACCTGTAATCCAGCTCAA  150

seq1  AGGTATGAGGTGCCCTCTTCCGGCCTCTGAAGATAACCATGGACATGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGAGGTGCCCTCTTCCGGCCTCTGAAGATAACCATGGACATGTGG  200

seq1  CATACACTCACACAGATACATAGATGCACATAAATTAAAATAATATGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACTCACACAGATACATAGATGCACATAAATTAAAATAATATGCCT  250

seq1  TAAAAAAAGTTCTCGGCCGGGCATGGTGGCACACGCCTTTAGTCCCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAGTTCTCGGCCGGGCATGGTGGCACACGCCTTTAGTCCCAGCA  300

seq1  CTCGGAAGGCAGAGGCAGGCGGATTTCTGAGTTCTAGGCCAGCCTGGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGAAGGCAGAGGCAGGCGGATTTCTGAGTTCTAGGCCAGCCTGGTCT  350

seq1  ACAAAGTGAGTTCCAGGACAGCCAGGAGTTCCAGGACAGCCAGGGCTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTGAGTTCCAGGACAGCCAGGAGTTCCAGGACAGCCAGGGCTATA  400

seq1  CAGAGAAACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGTTCTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGTTCTCCAC  450

seq1  ACAGCGTGCTTGTGATCTCAGTACTCAGAAGTGGAGGGAGTGGGTTGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGTGCTTGTGATCTCAGTACTCAGAAGTGGAGGGAGTGGGTTGGAA  500

seq1  ATTTCAGATCATTCTTGACTGCATAATAAGTTCTAGGCCAGCCTGGGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGATCATTCTTGACTGCATAATAAGTTCTAGGCCAGCCTGGGCTA  550

seq1  CAGGAGACCCTGTCTCTCCCACCTATGTATGCTCCCCTAAAAAATACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGACCCTGTCTCTCCCACCTATGTATGCTCCCCTAAAAAATACAGA  600

seq1  AAGGGAAGGAAAGAAGGGAGAAAGTGAGGAATGAAGGAATGACAAAGG-A  649
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAGGGAAGGAAAGAAGGGAGAAAGTGAGGAATGAAGGAATGACAAAGGAA  650

seq1  AAGATTGCAGGTCACACAAACACAAACCTGAAAGGACTGAGAGATAACCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGCAGGTCACACAAACACAAACCTGAAAGGACTGAGAGATAACCC  700

seq1  AGCCTAT-GGGGGAAACTTAGGAAAAAATATTAAAGAGA-TAATTGTCAT  747
      ||||||| ||||||||||||||||||||||||||||||| || |||||||
seq2  AGCCTATGGGGGGAAACTTAGGAAAAAATATTAAAGAGATTATTTGTCAT  750

seq1  CTTAAGGGACAGAACACACACAAGCAGCTGGCTTCTCTTCAGGGTT--GG  795
      ||||||||||||||||||||||||||||||||||||||||| ||||  ||
seq2  CTTAAGGGACAGAACACACACAAGCAGCTGGCTTCTCTTCAAGGTTTGGG  800

seq1  GGGCCCAGGAGC-AGAGCTGAATGGCCGTGGCT-CTGTTCAAGCACTGCT  843
      || || |||||| | |||||||||||||||| | |||||| |||||||||
seq2  GGTCCAAGGAGCAATAGCTGAATGGCCGTGGGTCCTGTTC-AGCACTGCT  849

seq1  CCCTTCCCTGGGACCCTAG-ATTCTCACCTCTGGAGAGCCACAGGAGCAG  892
      ||||||||||||||||||| |||||||||||||||||||||||||||| |
seq2  CCCTTCCCTGGGACCCTAGAATTCTCACCTCTGGAGAGCCACAGGAGCTG  899

seq1  ACGAAGATGGCAGTGAAGCCGGCGGTGCCAATCAGGGC-TTTAGACAGGT  941
      |||||||| |||||| |||| |||||||| |||||||| |||||||||  
seq2  ACGAAGATTGCAGTGTAGCCTGCGGTGCC-ATCAGGGCTTTTAGACAGTG  948

seq1  GTTTACAGTACTCAGTGTCTTTACC  966
      |||||||| | ||||| ||||||||
seq2  GTTTACAGAATTCAGT-TCTTTACC  972