BAC Information

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BAC

Clone NameB6Ng01-134N15
Chromosome18 (Build37)
Map Location 4,034,011 - 4,190,809
singlet/doubletdoublet
Overlap geneLOC621666, Lyzl1
Upstream geneLOC664794, Crem, EG621440, Cul2, EG621501, Bambi, LOC100039273, LOC435549, EG664867
Downstream geneLOC383374, LOC664909, Map3k8, Papd1, EG664931, LOC100039354, LOC433157, 9430020K01Rik, LOC268988, Svil
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134N15.bB6Ng01-134N15.g
ACCDH935045DH935046
length2471,085
definitionDH935045|Mus musculus domesticus DNA, BAC clone: B6Ng01-134N15, 5' end.DH935046|Mus musculus domesticus DNA, BAC clone: B6Ng01-134N15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,190,563 - 4,190,809)(4,034,011 - 4,035,098)
sequence
aattagtgtccatgctggatgaggtgtgaaatgaggactgcctgactcag
caggctataaaggtcactgatgaaggagacaggtttccaagggtgggaag
ggcagtccaagttatatagattctagatttcttattccatacctgttaat
ggaatggccacgctgtgccctcaatattttggattattaaactttaaaga
gtaaataaaacaagctgtttagtctagcccggggtgggggggggggc

gaattctttcctgtgaactttctttgctagcttacctttaaaggctgctt
aagaagcagaatatcaacaaagcagaaggcatagtggagtggaggccgag
agagaataatgctgtgtggcaaggaatgttacataaggtaaaggcactgg
agaggcagacaaaggagctcacgcaaggattgtcagggtgtattgagggc
tttgctttccatcctgaatgcagagacaatattaagtgaagagtagtgta
agcagagtttcactttcagtgaccttggtccaatctatgcctccaggatc
tgtgtcaatgagctgttatttaagatcctactctgaaaaggaaagatgga
aggcaaatacttttggacatatttagccagcatcagctttttctatactg
tttttaaggttctttattgtcttgaaatagtttttaaaaagtctaactta
gataacaaattcatctagaagagctgtctcctaattatgtcacagaagac
aaccttacaaaactttcaggtcttgaaacaaattttcctccatatctgat
tgtgtgtttcaggttgtgacaaacttcaggtgtgtgctaaaaaaatagat
gttatctttagaaaaattaaatatggtgtgatggttgattctaattgtaa
acaggacacactttagaaccacctagaaggagagtcataagggatcatct
ccattgagttggcttgtcagcaggtctctgggagattatcttgattagtt
gaagtgggaagattcacccattatggacaacaccatcccctacacttggg
tcctggactgtataaaagtgcagaaagagggctggtaaccaacaggcatg
catgaattcattctttgctctctgcttttgactctgcatgtgctgcttca
ggtttctgtcttgacttctcatggcaatgtattgtaacctggaactgtaa
gccttgttttctgggattgattttggaagatattttatatcagtaacaga
aatgaagttaagacagatggctaacacaaatatggccagttgtagagctt
aagcatcagtaccagcatgcgccaagagaaaacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_4190563_4190809
seq2: B6Ng01-134N15.b_54_300 (reverse)

seq1  GCCCCCCCCCCCACCCCGGGCTAGACTAAACAGCTTGTTTTATTTACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCCCCCCCACCCCGGGCTAGACTAAACAGCTTGTTTTATTTACTCT  50

seq1  TTAAAGTTTAATAATCCAAAATATTGAGGGCACAGCGTGGCCATTCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTTTAATAATCCAAAATATTGAGGGCACAGCGTGGCCATTCCATT  100

seq1  AACAGGTATGGAATAAGAAATCTAGAATCTATATAACTTGGACTGCCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGTATGGAATAAGAAATCTAGAATCTATATAACTTGGACTGCCCTT  150

seq1  CCCACCCTTGGAAACCTGTCTCCTTCATCAGTGACCTTTATAGCCTGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCTTGGAAACCTGTCTCCTTCATCAGTGACCTTTATAGCCTGCTG  200

seq1  AGTCAGGCAGTCCTCATTTCACACCTCATCCAGCATGGACACTAATT  247
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGCAGTCCTCATTTCACACCTCATCCAGCATGGACACTAATT  247


seq1: chr18_4034011_4035098
seq2: B6Ng01-134N15.g_69_1153

seq1  GAATTCTTTCCTGTGAACTTTCTTTGCTAGCTTACCTTTAAAGGCTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTGTGAACTTTCTTTGCTAGCTTACCTTTAAAGGCTGCTT  50

seq1  AAGAAGCAGAATATCAACAAAGCAGAAGGCATAGTGGAGTGGAGGCCGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCAGAATATCAACAAAGCAGAAGGCATAGTGGAGTGGAGGCCGAG  100

seq1  AGAGAATAATGCTGTGTGGCAAGGAATGTTACATAAGGTAAAGGCACTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATAATGCTGTGTGGCAAGGAATGTTACATAAGGTAAAGGCACTGG  150

seq1  AGAGGCAGACAAAGGAGCTCACGCAAGGATTGTCAGGGTGTATTGAGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGACAAAGGAGCTCACGCAAGGATTGTCAGGGTGTATTGAGGGC  200

seq1  TTTGCTTTCCATCCTGAATGCAGAGACAATATTAAGTGAAGAGTAGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTCCATCCTGAATGCAGAGACAATATTAAGTGAAGAGTAGTGTA  250

seq1  AGCAGAGTTTCACTTTCAGTGACCTTGGTCCAATCTATGCCTCCAGGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGTTTCACTTTCAGTGACCTTGGTCCAATCTATGCCTCCAGGATC  300

seq1  TGTGTCAATGAGCTGTTATTTAAGATCCTACTCTGAAAAGGAAAGATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAATGAGCTGTTATTTAAGATCCTACTCTGAAAAGGAAAGATGGA  350

seq1  AGGCAAATACTTTTGGACATATTTAGCCAGCATCAGCTTTTTCTATACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAATACTTTTGGACATATTTAGCCAGCATCAGCTTTTTCTATACTG  400

seq1  TTTTTAAGGTTCTTTATTGTCTTGAAATAGTTTTTAAAAAGTCTAACTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGGTTCTTTATTGTCTTGAAATAGTTTTTAAAAAGTCTAACTTA  450

seq1  GATAACAAATTCATCTAGAAGAGCTGTCTCCTAATTATGTCACAGAAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACAAATTCATCTAGAAGAGCTGTCTCCTAATTATGTCACAGAAGAC  500

seq1  AACCTTACAAAACTTTCAGGTCTTGAAACAAATTTTCCTCCATATCTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTACAAAACTTTCAGGTCTTGAAACAAATTTTCCTCCATATCTGAT  550

seq1  TGTGTGTTTCAGGTTGTGACAAACTTCAGGTGTGTGCTAAAAAAATAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTTCAGGTTGTGACAAACTTCAGGTGTGTGCTAAAAAAATAGAT  600

seq1  GTTATCTTTAGAAAAATTAAATATGGTGTGATGGTTGATTCTAATTGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTTTAGAAAAATTAAATATGGTGTGATGGTTGATTCTAATTGTAA  650

seq1  ACAGGACACACTTTAGAACCACCTAGAAGGAGAGTCATAAGGGATCATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACACACTTTAGAACCACCTAGAAGGAGAGTCATAAGGGATCATCT  700

seq1  CCATTGAGTTGGCTTGTCAGCAGGTCTCTGGGAGATTATCTTGATTAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGAGTTGGCTTGTCAGCAGGTCTCTGGGAGATTATCTTGATTAGTT  750

seq1  GAAGTGGGAAGATTCACCCATTATGGACAACACCATCCCCTACACTTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGGAAGATTCACCCATTATGGACAACACCATCCCCTACACTTGGG  800

seq1  TCCTGGACTGTATAAAAGTGCAGAAAGAGGGCTGGTAACCAACAGGCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGACTGTATAAAAGTGCAGAAAGAGGGCTGGTAACCAACAGGCATG  850

seq1  CATGAATTCATTCTTTGCTCTCTGCTTTTGACTCTGCATGTGCTGCTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATTCATTCTTTGCTCTCTGCTTTTGACTCTGCATGTGCTGCTTCA  900

seq1  GGTTTCTGTCTTGACTTCTCCATGGCAATGTATTGTAACCTGGAACTGTA  950
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGTTTCTGTCTTGACTTCT-CATGGCAATGTATTGTAACCTGGAACTGTA  949

seq1  AGCCTTGTTTTTCTGGATTGATTTTTGGAAGATTATTTTATATCAGTAAC  1000
      |||||||||||   ||||||| |||||||||| |||||||||||||||||
seq2  AGCCTTGTTTTCTGGGATTGA-TTTTGGAAGA-TATTTTATATCAGTAAC  997

seq1  AGAAATGAAGTTAAGACAGATGGCTTACACAAATAT-GCCAGTTGTAGAG  1049
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  AGAAATGAAGTTAAGACAGATGGCTAACACAAATATGGCCAGTTGTAGAG  1047

seq1  CTAAAGCATCAGGTACAAGCATGCGCCAAGAGAAAACAA  1088
      || |||||||| |||| ||||||||||||||||||||||
seq2  CTTAAGCATCA-GTACCAGCATGCGCCAAGAGAAAACAA  1085


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