BAC Information

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BAC

Clone NameB6Ng01-137C21
Chromosome18 (Build37)
Map Location 73,571,071 - 73,572,229
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC629684, LOC100043411, LOC100042955
Downstream geneRkhd2, Smad4, Elac1, Me2, Mro, Mapk4, 2810433K01Rik, Cxxc1, EG435570, Mbd1, Ccdc11, LOC628298, LOC668124
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137C21.bB6Ng01-137C21.g
ACCDH936763DH936764
length1,2431,143
definitionDH936763|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C21, 5' end.DH936764|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaagatgattctctgcctcaagatttctggctttttgactatgt
gtagtgggttcataccagagacaggtgggtttttgagcttgaggccagct
tggactaaatagcaagctcctggccagttaggagagaatattcttgcctg
gagttagacacagatttaggtactcctgaaaagagattttagagatgtaa
aattatgccttaaatcagcttaattttgttgtttttctgagacagaggct
cagactgccctggaactcactatgtggcccagtctggcctctgctttcag
aatgctgggattaaaggcatgtactaccaaacctgactcagttcactttt
aaatggagagattatcctgattactagggaggttctgacctaatcttgag
ttcttattttagacaagttagaaatgagctcatgtggaagaaagcaaaca
atccatgctgtgaattgcctatggtgacgatggcaaggaactgtattctg
gaactgagacccggacgatagagacccccattttccaactaaaatctgcc
agcaacctcaggtaggagaggatatgtaccccatatgaggatactacacc
tctagctgaacaccttgatttaactctgagacagagaaccaagagacacc
acacacagatttctgacccacagaaactgagataattcttaagcctttaa
gggctctataatctctgccctgtgagagctgacaaaaatatgcctgtact
gtattctaatctagtattctacaagacattgtgaatcctgtattaacaaa
ggtttgtttttagttcattcaattacatacagctcagattctttgacttg
ctttagttcccccctttctcctgcatgcatgtgtgtgtgtatatccaatg
tcctgctctataaaatttgaccttcttcctttaagacgaggtctcactga
accaggagttaggctggtggccaagccaagtttttatgagtgttggagtc
tactcagttccttatgtttattacagcaggagctccttacccactgagca
acctctttagctcttgctatagtttccatgctactgctattaccaacaaa
atcattcatcatcatcattcattcatcatctatcgatctatcaatcatct
ttcatcatcctcatcgtcctcatcatcatccaccagaaattctacacaag
ggttaataaagacggagatagaagacggtgtgtggactctgca
ttaaatcacattgagagttggtgtttgttttttaaagttagtcagctatt
ctaactttcgtgactcatactctaattaaatatacattctccagacagaa
aacagctgatgggcattcctgcactactacctattttatccaggctaatt
tggttgaaagaagagacgccaggtttcctcaagcttggccaagagacgac
agattcatgcttaagctcaaatgatctcatgaagagtcaagggcaggaac
aaaagagacccatattggaggggagagattagcttaatagtttgaacagt
gtatttgcagaatcactgtagaccctggggtggatattctcatccctctg
catcgttcttgcttcccctcaggctctccctgctcctttctccagggctt
gggcattcaacaatcctagaaagtctgccatttagtcccagggatccatg
ttctatctccatgttcttaattctagcacaccaaaagaatctgattcgcc
tgccttatccctggacacccttcaattatccaatcaggtatgccatgagg
aactgacaataaataaataaataaataaataaataaataaataaataaat
caaaacaaaacaaaaaataagactgttgaggcagcaagggctgacagtgg
gtaaactcctcagaagagaatagagcagagcagacaagccccacctctct
agagcacccctgattctatctgatagaaactatcttgtgccactggaaga
tatctctacagaagtttctagggccctgaatctcagtacaccacccccat
aacctatgacattaatgcctacagctgactaatatacaataatttactca
gaacacagggtttgcctgaaatttccatgaatttaacctagaaaatagaa
gaataaagtgaacaacttttgcttgggtctgggcacaggaaacttttacc
ctttgcttctagtttcattcatgtctgtggtgtgacaaaaactctaacaa
aagccacacatatgagtgtctggggttttgtctgtggaagagaaaccatg
actaaggcaactcttatgaagaaaacattcatggggctggcctccatttc
agaaggttcagtcattaggcatcatggtgagcattgcagcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_73571071_73572229
seq2: B6Ng01-137C21.g_78_1220

seq1  TTAAATCACATTGAGAGTTGGTGTTTGTTTTTTAAAGTTAGTCAGCTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCACATTGAGAGTTGGTGTTTGTTTTTTAAAGTTAGTCAGCTATT  50

seq1  CTAACTTTCGTGACTCATACTCTAATTAAATATACATTCTCCAGACAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTTCGTGACTCATACTCTAATTAAATATACATTCTCCAGACAGAA  100

seq1  AACAGCTGATGGGCATTCCTGCACTACTACCTATTTTATCCAGGCTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTGATGGGCATTCCTGCACTACTACCTATTTTATCCAGGCTAATT  150

seq1  TGGTTGAAAGAAGAGACGCCAGGTTTCCTCAAGCTTGGCCAAGAGACGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGAAAGAAGAGACGCCAGGTTTCCTCAAGCTTGGCCAAGAGACGAC  200

seq1  AGATTCATGCTTAAGCTCAAATGATCTCATGAAGAGTCAAGGGCAGGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCATGCTTAAGCTCAAATGATCTCATGAAGAGTCAAGGGCAGGAAC  250

seq1  AAAAGAGACCCATATTGGAGGGGAGAGATTAGCTTAATAGTTTGAACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGACCCATATTGGAGGGGAGAGATTAGCTTAATAGTTTGAACAGT  300

seq1  GTATTTGCAGAATCACTGTAGACCCTGGGGTGGATATTCTCATCCCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGCAGAATCACTGTAGACCCTGGGGTGGATATTCTCATCCCTCTG  350

seq1  CATCGTTCTTGCTTCCCCTCAGGCTCTCCCTGCTCCTTTCTCCAGGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGTTCTTGCTTCCCCTCAGGCTCTCCCTGCTCCTTTCTCCAGGGCTT  400

seq1  GGGCATTCAACAATCCTAGAAAGTCTGCCATTTAGTCCCAGGGATCCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATTCAACAATCCTAGAAAGTCTGCCATTTAGTCCCAGGGATCCATG  450

seq1  TTCTATCTCCATGTTCTTAATTCTAGCACACCAAAAGAATCTGATTCGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCTCCATGTTCTTAATTCTAGCACACCAAAAGAATCTGATTCGCC  500

seq1  TGCCTTATCCCTGGACACCCTTCAATTATCCAATCAGGTATGCCATGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTATCCCTGGACACCCTTCAATTATCCAATCAGGTATGCCATGAGG  550

seq1  AACTGACAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT  600
      |||||||    |||||||||||||||||||||||||||||||||||||||
seq2  AACTGAC----AATAAATAAATAAATAAATAAATAAATAAATAAATAAAT  596

seq1  AAATCAAAACAAAACAAAAAATAAGACTGTTGAGGCAGCAAGGGCTGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAAACAAAACAAAAAATAAGACTGTTGAGGCAGCAAGGGCTGACA  646

seq1  GTGGGTAAACTCCTCAGAAGAGAATAGAGCAGAGCAGACAAGCCCCACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTAAACTCCTCAGAAGAGAATAGAGCAGAGCAGACAAGCCCCACCT  696

seq1  CTCTAGAGCACCCCTGATTCTATCTGATAGAAACTATCTTGTGCCACTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGAGCACCCCTGATTCTATCTGATAGAAACTATCTTGTGCCACTGG  746

seq1  AAGATATCTCTACAGAAGTTTCTAGGGCCCTGAATCTCAGTACACCACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATCTCTACAGAAGTTTCTAGGGCCCTGAATCTCAGTACACCACCC  796

seq1  CCATAACCTATGACATTAATGCCTACAGCTGACTAATATACAATAATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAACCTATGACATTAATGCCTACAGCTGACTAATATACAATAATTTA  846

seq1  CTCAGAACACAGGGTTTGCCTGAAATTTCCATGAATTAAACCTAGAAAAT  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTCAGAACACAGGGTTTGCCTGAAATTTCCATGAATTTAACCTAGAAAAT  896

seq1  AGAAGGAATAAAGTGAACAACTTTTGCTTGGGTCTGGGCAACAGGAAACT  950
      |||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGAA-GAATAAAGTGAACAACTTTTGCTTGGGTCTGGGC-ACAGGAAACT  944

seq1  TTTACCCTTTGCTTCTAGTTTCATTCATGTCTGTTGGTGTGACAAATACT  1000
      ||||||||||||||||||||||||||||||||| |||||||||||| |||
seq2  TTTACCCTTTGCTTCTAGTTTCATTCATGTCTG-TGGTGTGACAAAAACT  993

seq1  CTAACAAAAGGCCACACATATGGAGTGTCTTGGGGTTTTGTTCTGT-GAG  1049
      ||||||||| ||||||||||| ||||||| |||||||||| ||||| || 
seq2  CTAACAAAA-GCCACACATAT-GAGTGTC-TGGGGTTTTG-TCTGTGGAA  1039

seq1  GAGACACCATGACTAAGGCAACTCTTATGAAGGAAAACATTCAATTGGGG  1099
      |||| |||||||||||||||||||||||||| |||||||||||  |||||
seq2  GAGAAACCATGACTAAGGCAACTCTTATGAA-GAAAACATTCA--TGGGG  1086

seq1  CTGGCTTACAATTTCAG-AGGTTCAGTCCATTA-GCATCATGGTGGGAAG  1147
      ||||| | | ||||||| ||||||||| ||||| |||||||||||   ||
seq2  CTGGCCT-CCATTTCAGAAGGTTCAGT-CATTAGGCATCATGGTG---AG  1131

seq1  CATGGCAGCATC  1159
      ||| ||||||||
seq2  CATTGCAGCATC  1143