BAC Information

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BAC

Clone NameB6Ng01-140K24
Chromosome18 (Build37)
Map Location 3,029,750 - 3,030,921
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC664794, Crem, EG621440, Cul2, EG621501, Bambi, LOC100039273, LOC435549, EG664867
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140K24.bB6Ng01-140K24.g
ACCDH939347DH939348
length1,1631,073
definitionDH939347|Mus musculus domesticus DNA, BAC clone: B6Ng01-140K24, 5' end.DH939348|Mus musculus domesticus DNA, BAC clone: B6Ng01-140K24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattaaagcaaaactcacagcagcctccttcaggatagttcatg
ctaaaagcatttcatgattctatacccaatgtgtataaattattctatac
acatacagtggaattctctacaacatgaaagacaacaaagtgggaaacat
acaacatggatcaatcatttcaaacccttaacctgaaaaagttgatgcac
atagacctatgacgtcttccttttcctataccccatgtgaacatgacaac
actaatgtattattgaacagaaggcttttgttttacatgtgaaggtaaga
acatacagaggaatatgtaagagtccatgggaccaaaagaatgtagtaca
ttgacctggctgatacaatgtaccaggccatggaggagggagttctgtgg
aagcaaacaagaggaaggataaacagaggaaagagggccaaggaaattaa
acaaacaaagaatgaaacaaaaacaaaaaaacaaaactaaacaaaaaaca
caaaaataaataaataattaaaacaaaaaatcaaagtaccatgagaagca
ccaatagaaggagaaccctgacaaaaatcaagagcccaacagtaggtaga
caaagttcatgaattttataccaaagtgatccaggggaaagggaagcaaa
gattagggtctgtggcaagaagtcctgagaggaatcagaattctgtaaga
agtactggcaattctgtgatattacagacattagaatcctctctgatatg
taaataggcccctcagccacttatcctgtgtgtctttgagacaaaacact
cttaagatgttgaaactctctgagaggctgggtgatagcgaaatgccttt
tcaggccaaggccatgcaacttgcttattctttttttttttttgtctact
aatgaacacctatatctcagcatgccattctgccataccattttgtgctc
caagggctattaagaaaagccctcatcctgaattcctaattacttcttgg
ggtggctacacacttgcgtacattttggttgtttctgacaggtgactaag
gtaagggttacagtattccgagacttctttaagaagtgatgcatcttgtt
ctaagttgacctgaatgactaatattctggcatagaaatgcctgagatcc
gtgaatcttaaag
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttt
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggatttcattgatggattttcatatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgagtatttttgc
atcgatattcataagagaaataggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtagtagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcataactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggcttttttttggctgggagactattaataactgcttctatttc
attaggggatatgggactgtttagatcgttaacttgatcctgatttaact
ttggtacctggtatctgtcaagaaattcgtccatttcgtccaggttttcc
agttttgttgagtatagccttttgtagaaggatctgatggtgttttggat
ttcttcaggatctgttgttatgtctcccttttcatttctgtttttgttaa
ttaggattttgtctctgtgctcttttagtgagtctagctaagtttttatc
tatcttgtttattttcttaaagaaccaactcctcgtttggttaattcttt
gaatagttcttcttgttttcacttgggtgatttcacccctgagtttgagt
atttcctgccatctactctcttgggtgaaatttcttctcttttttcagag
ctattagatgtgtgtcaagctgctagtgtgtgcttcctcagtttcttctt
ggaggcactcaagctatggagtttcctcttagaattgcttcattggtccc
ataggtatggggatgtgtgcttcattcataactctaaagactttatcttt
cttttacctcttgaccagggtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_3029750_3030921
seq2: B6Ng01-140K24.b_47_1209 (reverse)

seq1  CTTTAAGATTCA-GGATCTCCTGGCA-TTCTATCCCAGAATATTAGTCAT  48
      |||||||||||| |||||| | |||| |||||| ||||||||||||||| 
seq2  CTTTAAGATTCACGGATCT-CAGGCATTTCTATGCCAGAATATTAGTCA-  48

seq1  TTTCAGTTCAACTCTAGAAACAGGATGACATCATCTCTAAAAG-AGTCT-  96
       ||||| |||||| ||| |||| |||| |||||  ||| |||| ||||| 
seq2  -TTCAGGTCAACT-TAG-AACAAGATG-CATCACTTCTTAAAGAAGTCTC  94

seq1  GAAATAACTTGTAAACACCTTGGCCCTAAGTCA-CTGTCAGAAAACAAAA  145
      | ||||   |||||   ||||   ||| ||||| ||||||||||   || 
seq2  GGAATA--CTGTAA--CCCTT--ACCTTAGTCACCTGTCAGAAA--CAAC  136

seq1  CAAAATGGTACGCAAAGTGTGTAGCCAACTCCAAGAAGTAATTAGGAA-T  194
      |||||| |||||| |||||||||||| || |||||||||||||||||| |
seq2  CAAAAT-GTACGC-AAGTGTGTAGCC-ACCCCAAGAAGTAATTAGGAATT  183

seq1  CAGGATGAGAGCTTTTC-TAATAGCCCTTGGAGCACAAAAT-GTATGGCA  242
      ||||||||| ||||||| ||||||||||||||||||||||| ||||||||
seq2  CAGGATGAGGGCTTTTCTTAATAGCCCTTGGAGCACAAAATGGTATGGCA  233

seq1  GAATGGCATGCTGAGATATAGGTGTTCATTAGTAGACAAAAAAAAAAAAA  292
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAATGGCATGCTGAGATATAGGTGTTCATTAGTAGAC-AAAAAAAAAAAA  282

seq1  AGAATAAGCAAGTTGCATGGCCTTGGCCTG-AAAGGCATTTCGCTATCAC  341
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGAATAAGCAAGTTGCATGGCCTTGGCCTGAAAAGGCATTTCGCTATCAC  332

seq1  CCAGCCTCTCAGAGAGTTTCAACATCTTAAGAGTGTTTTGTCTCAAAGAC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCTCAGAGAGTTTCAACATCTTAAGAGTGTTTTGTCTCAAAGAC  382

seq1  ACACAGGATAAGTGGCTGAGGGGCCTATTTACATATCAGAGAGGATTCTA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGATAAGTGGCTGAGGGGCCTATTTACATATCAGAGAGGATTCTA  432

seq1  ATGTCTGTAATATCACAGAATTGCCAGTACTTCTTACAGAATTCTGATTC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTAATATCACAGAATTGCCAGTACTTCTTACAGAATTCTGATTC  482

seq1  CTCTCAGGACTTCTTGCCACAGACCCTAATCTTTGCTTCCCTTTCCCCTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGGACTTCTTGCCACAGACCCTAATCTTTGCTTCCCTTTCCCCTG  532

seq1  GATCACTTTGGTATAAAATTCATGAACTTTGTCTACCTACTGTTGGGCTC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTTTGGTATAAAATTCATGAACTTTGTCTACCTACTGTTGGGCTC  582

seq1  TTGATTTTTGTCAGGGTTCTCCTTCTATTGGTGCTTCTCATGGTACTTTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTTGTCAGGGTTCTCCTTCTATTGGTGCTTCTCATGGTACTTTG  632

seq1  ATTTTTTGTTTTAATTATTTATTTATTTTTGTGTTTTTTGTTTAGTTTTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGTTTTAATTATTTATTTATTTTTGTGTTTTTTGTTTAGTTTTG  682

seq1  TTTTTTTGTTTTTGTTTCATTCTTTGTTTGTTTAATTTCCTTGGCCCTCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTTTTTGTTTCATTCTTTGTTTGTTTAATTTCCTTGGCCCTCT  732

seq1  TTCCTCTGTTTATCCTTCCTCTTGTTTGCTTCCACAGAACTCCCTCCTCC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGTTTATCCTTCCTCTTGTTTGCTTCCACAGAACTCCCTCCTCC  782

seq1  ATGGCCTGGTACATTGTATCAGCCAGGTCAATGTACTACATTCTTTTGGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTGGTACATTGTATCAGCCAGGTCAATGTACTACATTCTTTTGGT  832

seq1  CCCATGGACTCTTACATATTCCTCTGTATGTTCTTACCTTCACATGTAAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGACTCTTACATATTCCTCTGTATGTTCTTACCTTCACATGTAAA  882

seq1  ACAAAAGCCTTCTGTTCAATAATACATTAGTGTTGTCATGTTCACATGGG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCCTTCTGTTCAATAATACATTAGTGTTGTCATGTTCACATGGG  932

seq1  GTATAGGAAAAGGAAGACGTCATAGGTCTATGTGCATCAACTTTTTCAGG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGGAAAAGGAAGACGTCATAGGTCTATGTGCATCAACTTTTTCAGG  982

seq1  TTAAGGGTTTGAAATGATTGATCCATGTTGTATGTTTCCCACTTTGTTGT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGTTTGAAATGATTGATCCATGTTGTATGTTTCCCACTTTGTTGT  1032

seq1  CTTTCATGTTGTAGAGAATTCCACTGTATGTGTATAGAATAATTTATACA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATGTTGTAGAGAATTCCACTGTATGTGTATAGAATAATTTATACA  1082

seq1  CATTGGGTATAGAATCATGAAATGCTTTTAGCATGAACTATCCTGAAGGA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGGTATAGAATCATGAAATGCTTTTAGCATGAACTATCCTGAAGGA  1132

seq1  GGCTGCTGTGAGTTTTGCTTTAATTGAATTC  1172
      |||||||||||||||||||||||||||||||
seq2  GGCTGCTGTGAGTTTTGCTTTAATTGAATTC  1163