BAC Information

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BAC

Clone NameB6Ng01-142F07
Chromosome18 (Build37)
Map Location 75,950,714 - 75,978,421
singlet/doubletdoublet
Overlap genenone
Upstream geneAcaa2, LOC672799, Lipg, Rpl17, BC031181, Dym, LOC628356, EG667777, Smad7, Gm672
Downstream geneZbtb7c, 4833419G08Rik, LOC668184, Smad2, LOC668188, EG639576
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142F07.bB6Ng01-142F07.g
ACCDH940554DH940555
length7521,155
definitionDH940554|Mus musculus domesticus DNA, BAC clone: B6Ng01-142F07, 5' end.DH940555|Mus musculus domesticus DNA, BAC clone: B6Ng01-142F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,977,676 - 75,978,421)(75,950,714 - 75,951,902)
sequence
gaattcctgcaggtttgcttggtgattcttcctagccattgagatcttct
tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc
ttcttcttcttctcctcctcctcctcctcctcctcctccttcttcttctt
cttcatcatcatttcagtaattcacatactaaatgtatacagagacatta
tattgtgtgtgtgtgtgtgagagagagagagagagagagagagagaatgg
aaaacacacctgaaagtgactagaaaaaaaaaaacaagaacgaacaatga
gggcatctagaacccagggcttgggtacagttatacggcactaatgagcc
gatgagtcctggctcttcctactcaggaattgctccaactcaagtttgga
caaccatatccaaattatacaaaggcccatggaagtctagagaaatctac
tggagaaatgaatagattttctaagctcaggatgtcagtttccaagttac
tggatcttccagagtgacaaaagtaaaataataatactcctttctttaag
tagccccagaaaccactgccctcccaactaggaagctgttggttgtgtgt
cgccttgctaaactaggttgtctgtgtggcttcctttcatttaataggtc
ttcagcaatgtggactattgctgagccagctaaatgctgccttctgtgcc
ataaatctggctatgcccctgccaagtgtgtgtgtgtgtgggtgattgtg
tg
gaattcaccagccagacactgaggaagatggatgtattgggacatagcga
gcagtaatgggtcacgtggcaaacacggtctagaatagatgggttttatt
aagttatacaaacgagttagaaaaaaagcctaagctataaggcttatgtt
ttctttaaataataaaaggtttctgtgtcattattggaagttggctgatc
atagacacagctcagccatatttggcgcccaacatggggcatggacctat
gactcttagttcaagattctcatgctctactgactgagatagctaagcac
ttgagtgggtcctgtaagcagttgaaggggagccagtcactggagcttca
gctctcttcccaggttgtggcagaggagtcatcaggtccaccgtggctca
aaaggaaccccggcactcgggcactggggcaggcaggaccgcagggcagc
ctgagagtgcctgccacagcgcaggcccaacaacttcccagagctgtggc
agagtcatcagcacagccagccgggatgcccatgggtaaacgcctacagc
cacgcagatgcatggctagttggatagacttggtgtgggctggccaatag
cagctccagctcagaatggatagggcagcctgctagacagagctgagggg
gtagagctagcctccagtgccatatgctaagctgagtcaccagtaactac
agggaacaggagccaggcacagcatgcttaagtgtgctcaaatgcaaaca
aacaaactgagtataaataatcatggaaaaaaagaattggtttaaaaata
ataaaatctctgaaggaacgagagagttagaaatatatatatattctgtg
ttaaaattgggaaaatataatagcagagggcccttggaccttgtataatt
ttccattatcaacatacaaataattatattttcagtatgattgcatttca
tatatctcttagatgatcaaataaagatcatcagagaatacatctatagc
gccaccttgtgatgtgatgcagatgcagctcaaagagatactagataaaa
agctcagctatgacacgtattcgactaaaattatattttaatttgtagat
cagtgctagtgagacattgtctagtaaatacgattcggtttatgatacac
tttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_75977676_75978421
seq2: B6Ng01-142F07.b_46_797 (reverse)

seq1  CACACA------CACACACACACACACTTGGCAGGGGCATAGCCAGATTT  44
      ||||||      ||||||||||||||||||||||||||||||||||||||
seq2  CACACAATCACCCACACACACACACACTTGGCAGGGGCATAGCCAGATTT  50

seq1  ATGGCACAGAAGGCAGCATTTAGCTGGCTCAGCAATAGTCCACATTGCTG  94
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACAGAAGGCAGCATTTAGCTGGCTCAGCAATAGTCCACATTGCTG  100

seq1  AAGACCTATTAAATGAAAGGAAGCCACACAGACAACCTAGTTTAGCAAGG  144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTATTAAATGAAAGGAAGCCACACAGACAACCTAGTTTAGCAAGG  150

seq1  CGACACACAACCAACAGCTTCCTAGTTGGGAGGGCAGTGGTTTCTGGGGC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACACACAACCAACAGCTTCCTAGTTGGGAGGGCAGTGGTTTCTGGGGC  200

seq1  TACTTAAAGAAAGGAGTATTATTATTTTACTTTTGTCACTCTGGAAGATC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAAGAAAGGAGTATTATTATTTTACTTTTGTCACTCTGGAAGATC  250

seq1  CAGTAACTTGGAAACTGACATCCTGAGCTTAGAAAATCTATTCATTTCTC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAACTTGGAAACTGACATCCTGAGCTTAGAAAATCTATTCATTTCTC  300

seq1  CAGTAGATTTCTCTAGACTTCCATGGGCCTTTGTATAATTTGGATATGGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGATTTCTCTAGACTTCCATGGGCCTTTGTATAATTTGGATATGGT  350

seq1  TGTCCAAACTTGAGTTGGAGCAATTCCTGAGTAGGAAGAGCCAGGACTCA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAAACTTGAGTTGGAGCAATTCCTGAGTAGGAAGAGCCAGGACTCA  400

seq1  TCGGCTCATTAGTGCCGTATAACTGTACCCAAGCCCTGGGTTCTAGATGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTCATTAGTGCCGTATAACTGTACCCAAGCCCTGGGTTCTAGATGC  450

seq1  CCTCATTGTTCGTTCTTGTTTTTTTTTTTCTAGTCACTTTCAGGTGTGTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTGTTCGTTCTTGTTTTTTTTTTTCTAGTCACTTTCAGGTGTGTT  500

seq1  TTCCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACAA  550

seq1  TATAATGTCTCTGTATACATTTAGTATGTGAATTACTGAAATGATGATGA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGTCTCTGTATACATTTAGTATGTGAATTACTGAAATGATGATGA  600

seq1  AGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGAAGAAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGAAGAAG  650

seq1  AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA  700

seq1  GAAGAAGATCTCAATGGCTAGGAAGAATCACCAAGCAAACCTGCAGGAAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGATCTCAATGGCTAGGAAGAATCACCAAGCAAACCTGCAGGAAT  750

seq1  TC  746
      ||
seq2  TC  752

seq1: chr18_75950714_75951902
seq2: B6Ng01-142F07.g_65_1219

seq1  GAATTCACCAGCCAGACACTGAGGAAGATGGATGTATTGGGACATAGCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAGCCAGACACTGAGGAAGATGGATGTATTGGGACATAGCGA  50

seq1  GCAGTAATGGGTCACGTGGCAAACACGGTCTAGAATAGATGGGTTTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAATGGGTCACGTGGCAAACACGGTCTAGAATAGATGGGTTTTATT  100

seq1  AAGTTATACAAACGAGTTAGAAAAAAAGCCTAAGCTATAAGGCTTATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATACAAACGAGTTAGAAAAAAAGCCTAAGCTATAAGGCTTATGTT  150

seq1  TTCTTTAAATAATAAAAGGTTTCTGTGTCATTATTGGAAGTTGGCTGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAAATAATAAAAGGTTTCTGTGTCATTATTGGAAGTTGGCTGATC  200

seq1  ATAGACACAGCTCAGCCATATTTGGCGCCCAACATGGGGCATGGACCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACACAGCTCAGCCATATTTGGCGCCCAACATGGGGCATGGACCTAT  250

seq1  GACTCTTAGTTCAAGATTCTCATGCTCTACTGACTGAGATAGCTAAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTAGTTCAAGATTCTCATGCTCTACTGACTGAGATAGCTAAGCAC  300

seq1  TTGAGTGGGTCCTGTAAGCAGTTGAAGGGGAGCCAGTCACTGGAGCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGGGTCCTGTAAGCAGTTGAAGGGGAGCCAGTCACTGGAGCTTCA  350

seq1  GCTCTCTTCCCAGGTTGTGGCAGAGGAGTCATCAGGTCCACCGTGGCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTTCCCAGGTTGTGGCAGAGGAGTCATCAGGTCCACCGTGGCTCA  400

seq1  AAAGGAACCCCGGCACTCGGGCACTGGGGCAGGCAGGACCGCAGGGCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAACCCCGGCACTCGGGCACTGGGGCAGGCAGGACCGCAGGGCAGC  450

seq1  CTGAGAGTGCCTGCCACAGCGCAGGCCCAACAACTTCCCAGAGCTGTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGTGCCTGCCACAGCGCAGGCCCAACAACTTCCCAGAGCTGTGGC  500

seq1  AGAGTCATCAGCACAGCCAGCCGGGATGCCCATGGGTAAACGCCTACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCATCAGCACAGCCAGCCGGGATGCCCATGGGTAAACGCCTACAGC  550

seq1  CACGCAGATGCATGGCTAGTTGGATAGACTTGGTGTGGGCTGGCCAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCAGATGCATGGCTAGTTGGATAGACTTGGTGTGGGCTGGCCAATAG  600

seq1  CAGCTCCAGCTCAGAATGGATAGGGCAGCCTGCTAGACAGAGCTGAGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCAGCTCAGAATGGATAGGGCAGCCTGCTAGACAGAGCTGAGGGG  650

seq1  GTAGAGCTAGCCTCCAGTGCCATATGCTAAGCTGAGTCACCAGTAACTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGCTAGCCTCCAGTGCCATATGCTAAGCTGAGTCACCAGTAACTAC  700

seq1  AGGGAACAGGAGCCAGGCACAGCATGCTTAAGTGTGCTCAAATGCAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACAGGAGCCAGGCACAGCATGCTTAAGTGTGCTCAAATGCAAACA  750

seq1  AACAAACTGAGTATAAATAATCATGGAAAAAAAGAATTGGTTTAAAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACTGAGTATAAATAATCATGGAAAAAAAGAATTGGTTTAAAAATA  800

seq1  ATAAAATCTCTGAAGGAACGAGAGAGTTAGAAATATATATATATTCTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCTCTGAAGGAACGAGAGAGTTAGAAATATATATATATTCTGTG  850

seq1  TTAAAAATTGGAAAATATAATAGCAGAGGGCCCTTGGACCTTGTATAATT  900
      |||||| | |||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTGGGAAAATATAATAGCAGAGGGCCCTTGGACCTTGTATAATT  900

seq1  TTCCATTATCAACATACAAATAATTATATTTTCAGTAATGATTGCAATTT  950
      |||||||||||||||||||||||||||||||||||| |||||||| ||||
seq2  TTCCATTATCAACATACAAATAATTATATTTTCAGT-ATGATTGC-ATTT  948

seq1  CATATATCCTCTTTAAGAATGATCAAAATAAAGGATCATCAGAGAAATAC  1000
      ||||||| |||||  || |||||| ||||||| ||||||||||| |||||
seq2  CATATAT-CTCTT--AG-ATGATC-AAATAAA-GATCATCAGAG-AATAC  991

seq1  AATCTATAGCGCCACCTTGTGATGTGATTGCAGAATGGCAGCTCATAGAG  1050
       |||||||||||||||||||||||||| ||||||   |||||||| ||||
seq2  -ATCTATAGCGCCACCTTGTGATGTGA-TGCAGA--TGCAGCTCAAAGAG  1037

seq1  ATACTAGATAAAGAGGCTTCAGCTATGAACCAACGTATTCGGACTAGATA  1100
      |||||||||||| ||   ||||||||||    |||||||| ||||| | |
seq2  ATACTAGATAAAAAG--CTCAGCTATGA---CACGTATTC-GACTA-AAA  1080

seq1  TTATATTTATATTGTTAAGGATCAGTTGCTAGTTGAAGGACAATATGCTA  1150
      ||||||||  |||  ||  |||||| |||||| |||  |||| | | || 
seq2  TTATATTTTAATTTGTA--GATCAG-TGCTAG-TGA--GACATTGT-CT-  1122

seq1  AGTTAAAAATACAGATTCTGTTTAATGATACCACTTTAG  1189
      |||   |||||| ||||| |||| |||||| ||||||||
seq2  AGT---AAATAC-GATTCGGTTT-ATGATA-CACTTTAG  1155