BAC Information

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BAC

Clone NameB6Ng01-145F05
Chromosome18 (Build37)
Map Location 58,390,980 - 58,540,660
singlet/doubletdoublet
Overlap genenone
Upstream geneMegf10, LOC672445, Prrc1, 1700011I03Rik, 4930511M06Rik, 2210409D07Rik, Slc12a2, 9330166H04Rik, Fbn2
Downstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik, 4833446K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145F05.bB6Ng01-145F05.g
ACCDH942759DH942760
length1,047831
definitionDH942759|Mus musculus domesticus DNA, BAC clone: B6Ng01-145F05, 5' end.DH942760|Mus musculus domesticus DNA, BAC clone: B6Ng01-145F05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,390,980 - 58,392,036)(58,539,830 - 58,540,660)
sequence
gaattcaataacggctagtgttggatggtgtggatcatgcttagtgtccc
tgtattctccagatcatctttggatggatcaccaggtcagcagctctagt
tggatactgaagaaaccgttatcatttcttggtagagatgaatatatagc
atggaagccaatatttcccttctccaatccaagccccaaccaggcccaac
cctacttagcttcctagactggatgtgttcagagtggtatagccattggt
ctttctcttttatcatccttctcacaaattacaacttcactttcaaatct
ttcctaatgggtaactgttattaggagtatggctatgcctcaggttatga
aaaatgctcatctttctagactcaatttgtgccttttggtttcccgattt
aaaataaaaagtcttggttcaggaaagctaaaaagctaagcagaagtcac
ttggctagagagcgtaaacaacagatttattactgataatttatgtgcca
atgattaggatgtgggattttcctaatattcacttgttaatcagctagca
tctaaaggcaattgaaagttggcatttcttgctaggaagaaaaacatcaa
gttaatttggacctaaaggaccaggaaatgcttttcacagcattcagtga
tagtgaggcctgatgactgtgtgctgtgaaatgttttcaggcaaatgtag
catgcaagtgttcaaagataagcaatgagcttacaaggtcccatttagga
tgttctcagtggcctatgttatatactaatgtatcaaataatggccgagg
tgctgggaaagatgcatatttctgtggtggagtttctataggtgcttctc
aaaagggagggcagatttgttaagcacatgtgtttagactgaggaaacac
aagcagtaaactttcttacagatgctgagacatagcttcagaagttgaga
tcagttagagctagtgagtatggggttgattgtggcttgtaacctcatca
gatgtgactgcaacagaggtcaagtaatactagccctcctgctgact
gaattcaagagctacgtatgcagtttcagcaggggacaaattcattaatg
ctaagtattttcatttttgtgaatttttaagggagtaaaggaagcatcag
aaattctggaatttctaaggaattcaccagttgcacagttgagaaattaa
gtgtgcaggagacacaatggagaaggaactgagtagaactggtcagtctt
cagggacttgcacttttcaatcttgtgtgctcatctggaatgcattattc
taagatctttccttgctaaacccagaagagcctttctgagctttcaatca
tatctatttcacactaagaaaacctactgtacagttttcaattaattcag
cgaactgtagttttatgttactcggagaaatctttttcattgaagacaaa
cagaaagtctagaaagagtgtcaggtacacagaagctgaagaaatatgac
ttacgaggtaggcatgaatcacacagttgaatagagaaccagggttgtga
gagagctacttcttggagtttaagcatcatactttctaaagtaactcctt
atatttaataagcaatgctgagtaaatgaatataacagagtagacatcag
agtctggagaatacaacgaacacagacattgagaaagagccccttttcat
ttactattatttaaagtaatttaggcataggctaatatctggttatgtta
ttcagaaattttacaaagggcttttttgagggttaaactttattgatttc
aagacatctcccttcttgaagtagcttgagaatattcttaataaaacttt
agggttttgttttttgtggggtttttttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58390980_58392036
seq2: B6Ng01-145F05.b_47_1093

seq1  GAATTCAATAACGGCTAGTGTTGGATGGTGTGGATCATGCTTAGTGTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAACGGCTAGTGTTGGATGGTGTGGATCATGCTTAGTGTCCC  50

seq1  TGTATTCTCCAGATCATCTTTGGATGGATCACCAGGTCAGCAGCTCTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCTCCAGATCATCTTTGGATGGATCACCAGGTCAGCAGCTCTAGT  100

seq1  TGGATACTGAAGAAACCGTTATCATTTCTTGGTAGAGATGAATATATAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACTGAAGAAACCGTTATCATTTCTTGGTAGAGATGAATATATAGC  150

seq1  ATGGAAGCCAATATTTCCCTTCTCCAATCCAAGCCCCAACCAGGCCCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGCCAATATTTCCCTTCTCCAATCCAAGCCCCAACCAGGCCCAAC  200

seq1  CCTACTTAGCTTCCTAGACTGGATGTGTTCAGAGTGGTATAGCCATTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTAGCTTCCTAGACTGGATGTGTTCAGAGTGGTATAGCCATTGGT  250

seq1  CTTTCTCTTTTATCATCCTTCTCACAAATTACAACTTCACTTTCAAATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTTTTATCATCCTTCTCACAAATTACAACTTCACTTTCAAATCT  300

seq1  TTCCTAATGGGTAACTGTTATTAGGAGTATGGCTATGCCTCAGGTTATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAATGGGTAACTGTTATTAGGAGTATGGCTATGCCTCAGGTTATGA  350

seq1  AAAATGCTCATCTTTCTAGACTCAATTTGTGCCTTTTGGTTTCCCGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCTCATCTTTCTAGACTCAATTTGTGCCTTTTGGTTTCCCGATTT  400

seq1  AAAATAAAAAGTCTTGGTTCAGGAAAGCTAAAAAGCTAAGCAGAAGTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAAGTCTTGGTTCAGGAAAGCTAAAAAGCTAAGCAGAAGTCAC  450

seq1  TTGGCTAGAGAGCGTAAACAACAGATTTATTACTGATAATTTATGTGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTAGAGAGCGTAAACAACAGATTTATTACTGATAATTTATGTGCCA  500

seq1  ATGATTAGGATGTGGGATTTTCCTAATATTCACTTGTTAATCAGCTAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTAGGATGTGGGATTTTCCTAATATTCACTTGTTAATCAGCTAGCA  550

seq1  TCTAAAGGCAATTGAAAGTTGGCATTTCTTGCTAGGAAGAAAAACATCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGGCAATTGAAAGTTGGCATTTCTTGCTAGGAAGAAAAACATCAA  600

seq1  GTTAATTTGGACCTAAAGGACCAGGAAATGCTTTTCACAGCATTCAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTGGACCTAAAGGACCAGGAAATGCTTTTCACAGCATTCAGTGA  650

seq1  TAGTGAGGCCTGATGACTGTGTGCTGTGAAATGTTTTCAGGCAAATGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGGCCTGATGACTGTGTGCTGTGAAATGTTTTCAGGCAAATGTAG  700

seq1  CATGCAAGTGTTCAAAGATAAGCAATGAGCTTACAAGGTCCCATTTAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAAGTGTTCAAAGATAAGCAATGAGCTTACAAGGTCCCATTTAGGA  750

seq1  TGTTCTCAGTGGCCTATGTTATATACTAATGTATCAAATAATGGCCGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCAGTGGCCTATGTTATATACTAATGTATCAAATAATGGCCGAGG  800

seq1  TGCTGGGAAAGATGCATATTTCTGTGGTGGAGTTTCTATAGGTGCTTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAAAGATGCATATTTCTGTGGTGGAGTTTCTATAGGTGCTTCTC  850

seq1  AAAAGGAAGGGCAGATTTGTTAAGCACATGTGTTTAGACTGAGGAAACAC  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGAGGGCAGATTTGTTAAGCACATGTGTTTAGACTGAGGAAACAC  900

seq1  AAGCAGTAAACTTTCTTACAAGATGCTGAGAACATAGCTTCAGAAGTTGA  950
      ||||||||||||||||||| |||||||||| |||||||||||||||||||
seq2  AAGCAGTAAACTTTCTTAC-AGATGCTGAG-ACATAGCTTCAGAAGTTGA  948

seq1  GATCAGTTAGAGCTAGTGAGTATGGGGTTGATTTGTGGCTTGTAAACCCC  1000
      ||||||||||||||||||||||||||||||| ||||||||||| |||| |
seq2  GATCAGTTAGAGCTAGTGAGTATGGGGTTGA-TTGTGGCTTGT-AACCTC  996

seq1  ATCCAGATGTGACCTGCCAACAGAAGTCAAAGTTATTACTAGCCCCCCTG  1050
      || ||||||||| ||| ||||||| |||||   || ||||||||| ||| 
seq2  AT-CAGATGTGA-CTG-CAACAGAGGTCAA--GTAATACTAGCCCTCCT-  1040

seq1  GCTGACT  1057
      |||||||
seq2  GCTGACT  1047

seq1: chr18_58539830_58540660
seq2: B6Ng01-145F05.g_68_898 (reverse)

seq1  AACAAAAAAACCCCACAAAAAACAAAACCCTAAAGTTTTATTAAGAATAT  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAAAACCCCACAAAAAACAAAACCCTAAAGTTTTATTAAGAATAT  50

seq1  TCTCAAGCTACTTCAAGAAGGGAGATGTCTTGAAATCAATAAAGTTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGCTACTTCAAGAAGGGAGATGTCTTGAAATCAATAAAGTTTAAC  100

seq1  CCTCAAAAAAGCCCTTTGTAAAATTTCTGAATAACATAACCAGATATTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAAAAGCCCTTTGTAAAATTTCTGAATAACATAACCAGATATTAG  150

seq1  CCTATGCCTAAATTACTTTAAATAATAGTAAATGAAAAGGGGCTCTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGCCTAAATTACTTTAAATAATAGTAAATGAAAAGGGGCTCTTTCT  200

seq1  CAATGTCTGTGTTCGTTGTATTCTCCAGACTCTGATGTCTACTCTGTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTGTGTTCGTTGTATTCTCCAGACTCTGATGTCTACTCTGTTAT  250

seq1  ATTCATTTACTCAGCATTGCTTATTAAATATAAGGAGTTACTTTAGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTACTCAGCATTGCTTATTAAATATAAGGAGTTACTTTAGAAAG  300

seq1  TATGATGCTTAAACTCCAAGAAGTAGCTCTCTCACAACCCTGGTTCTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGCTTAAACTCCAAGAAGTAGCTCTCTCACAACCCTGGTTCTCTA  350

seq1  TTCAACTGTGTGATTCATGCCTACCTCGTAAGTCATATTTCTTCAGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTGTGTGATTCATGCCTACCTCGTAAGTCATATTTCTTCAGCTTC  400

seq1  TGTGTACCTGACACTCTTTCTAGACTTTCTGTTTGTCTTCAATGAAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACCTGACACTCTTTCTAGACTTTCTGTTTGTCTTCAATGAAAAAG  450

seq1  ATTTCTCCGAGTAACATAAAACTACAGTTCGCTGAATTAATTGAAAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCCGAGTAACATAAAACTACAGTTCGCTGAATTAATTGAAAACTG  500

seq1  TACAGTAGGTTTTCTTAGTGTGAAATAGATATGATTGAAAGCTCAGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAGGTTTTCTTAGTGTGAAATAGATATGATTGAAAGCTCAGAAAG  550

seq1  GCTCTTCTGGGTTTAGCAAGGAAAGATCTTAGAATAATGCATTCCAGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCTGGGTTTAGCAAGGAAAGATCTTAGAATAATGCATTCCAGATG  600

seq1  AGCACACAAGATTGAAAAGTGCAAGTCCCTGAAGACTGACCAGTTCTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACAAGATTGAAAAGTGCAAGTCCCTGAAGACTGACCAGTTCTACT  650

seq1  CAGTTCCTTCTCCATTGTGTCTCCTGCACACTTAATTTCTCAACTGTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCTTCTCCATTGTGTCTCCTGCACACTTAATTTCTCAACTGTGCA  700

seq1  ACTGGTGAATTCCTTAGAAATTCCAGAATTTCTGATGCTTCCTTTACTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGAATTCCTTAGAAATTCCAGAATTTCTGATGCTTCCTTTACTCC  750

seq1  CTTAAAAATTCACAAAAATGAAAATACTTAGCATTAATGAATTTGTCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAATTCACAAAAATGAAAATACTTAGCATTAATGAATTTGTCCCC  800

seq1  TGCTGAAACTGCATACGTAGCTCTTGAATTC  831
      |||||||||||||||||||||||||||||||
seq2  TGCTGAAACTGCATACGTAGCTCTTGAATTC  831