BAC Information

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BAC

Clone NameB6Ng01-145N09
Chromosome18 (Build37)
Map Location 41,500,130 - 41,501,253
singlet/doubletsinglet
Overlap genenone
Upstream geneKctd16, EG225416, LOC677182
Downstream geneLOC100041988, LOC100041997, Prelid2, Gm851, Sh3rf2, EG435561, Plac8l1, LOC433177, Lars, EG625929, LOC100042757, Rbm27
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145N09.bB6Ng01-145N09.g
ACCDH943132DH943133
length1,120209
definitionDH943132|Mus musculus domesticus DNA, BAC clone: B6Ng01-145N09, 5' end.DH943133|Mus musculus domesticus DNA, BAC clone: B6Ng01-145N09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagatggagttgggggaggtacttagaaaattacacaggagaa
atggcaaactgtgggtgataaacacaacagaatcattcagagtatggggt
gggttaaaaacattgtgtggatataaaccaatcaggtaacaacactggta
tatttttcataaaacattgcccaaactctaaatacaatattgtgtagact
ttgattctgataaatccaactgaggtaaaaatacacacgctcaaaaaaac
ccacactgatcacttgtgtgtcaggagtggtagggaatgaaaaactagaa
tattggcttgcaacttgtaagtgtaatctctgacacaaatatatagcaaa
tatttagtaaatttctcatatagttctgtaaatacatgatatcctataag
catacacatgaaaggttgtttagatatgtgttttgatatgagattactat
ggacaaatgggtcttatggaagagaaggcatagtcacccaggtctggcag
acagcttttccccaaaagatgtttagctatgcaaagaaatgattatagca
gaataagaaaaatgtccttgatgtagtctccagtttggaagattttatgg
gaagacctctgttagatatgctgtggaaagctatagatggcatattgcat
tctgggagcatatagacaaaagcattgtttagcatggggaataatttttc
tgatttcctgaagtcaccaagtccattattttgtatttgtaaaatataca
ataactaagcaaactgactgagcagacttttcaagtagatgaaggtctct
agttactattgaacattccacttggcatgaaagttttgcggttgtgtggt
tcatgactttacaagtctcaggggtgtgcttctttttcatctgtattaat
ttccaattacaaccattattacgacattctatttatccctaaaaacagat
ccaggtcattggcttcctttactcaccttcactgataatcatggccagac
aggtgatgaacttgcctccttagtctactgccaccctaagaacatttggc
atcacattcctaaagtcttttattgaaagtttaacctgaagtaagctgtg
tgtctaggtatgattttttt
tgcttagctaaggacattctgccttttgtgaaaacatgcatggcagggaa
tctggagggtactctcttgaatgaaatagaccagacttagaaagatgaaa
atcacaagatttccctcatatgagaaacctttaaacactgaccactgaga
agcagccagtagattgctaactttcagggcacagaggtggcggggtaggg
ggggtgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_41500130_41501253
seq2: B6Ng01-145N09.b_49_1168

seq1  GAATTCAGAGATGGAGTTGGGGGAGGTACTTAGAAAATTACACAGGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGATGGAGTTGGGGGAGGTACTTAGAAAATTACACAGGAGAA  50

seq1  ATGGCAAACTGTGGGTGATAAACACAACAGAATCATTCAGAGTATGGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAACTGTGGGTGATAAACACAACAGAATCATTCAGAGTATGGGGT  100

seq1  GGGTTAAAAACATTGTGTGGATATAAACCAATCAGGTAACAACACTGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAAAAACATTGTGTGGATATAAACCAATCAGGTAACAACACTGGTA  150

seq1  TATTTTTCATAAAACATTGCCCAAACTCTAAATACAATATTGTGTAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCATAAAACATTGCCCAAACTCTAAATACAATATTGTGTAGACT  200

seq1  TTGATTCTGATAAATCCAACTGAGGTAAAAATACACACGCTCAAAAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCTGATAAATCCAACTGAGGTAAAAATACACACGCTCAAAAAAAC  250

seq1  CCACACTGATCACTTGTGTGTCAGGAGTGGTAGGGAATGAAAAACTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTGATCACTTGTGTGTCAGGAGTGGTAGGGAATGAAAAACTAGAA  300

seq1  TATTGGCTTGCAACTTGTAAGTGTAATCTCTGACACAAATATATAGCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGCTTGCAACTTGTAAGTGTAATCTCTGACACAAATATATAGCAAA  350

seq1  TATTTAGTAAATTTCTCATATAGTTCTGTAAATACATGATATCCTATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGTAAATTTCTCATATAGTTCTGTAAATACATGATATCCTATAAG  400

seq1  CATACACATGAAAGGTTGTTTAGATATGTGTTTTGATATGAGATTACTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACATGAAAGGTTGTTTAGATATGTGTTTTGATATGAGATTACTAT  450

seq1  GGACAAATGGGTCTTATGGAAGAGAAGGCATAGTCACCCAGGTCTGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAATGGGTCTTATGGAAGAGAAGGCATAGTCACCCAGGTCTGGCAG  500

seq1  ACAGCTTTTCCCCAAAAGATGTTTAGCTATGCAAAGAAATGATTATAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTTCCCCAAAAGATGTTTAGCTATGCAAAGAAATGATTATAGCA  550

seq1  GAATAAGAAAAATGTCCTTGATGTAGTCTCCAGTTTGGAAGATTTTATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGAAAAATGTCCTTGATGTAGTCTCCAGTTTGGAAGATTTTATGG  600

seq1  GAAGACCTCTGTTAGATATGCTGTGGAAAGCTATAGATGGCATATTGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCTCTGTTAGATATGCTGTGGAAAGCTATAGATGGCATATTGCAT  650

seq1  TCTGGGAGCATATAGACAAAAGCATTGTTTAGCATGGGGAATAATTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGAGCATATAGACAAAAGCATTGTTTAGCATGGGGAATAATTTTTC  700

seq1  TGATTTCCTGAAGTCACCAAGTCCATTATTTTGTATTTGTAAAATATACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCCTGAAGTCACCAAGTCCATTATTTTGTATTTGTAAAATATACA  750

seq1  ATAACTAAGCAAACTGACTGAGCAGACTTTTCAAGTAGATGAAGGTCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAAGCAAACTGACTGAGCAGACTTTTCAAGTAGATGAAGGTCTCT  800

seq1  AGTTACTATTGAACATTCCACTTGGCATGAAAGTTTTGCGGTTGTGTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTATTGAACATTCCACTTGGCATGAAAGTTTTGCGGTTGTGTGGT  850

seq1  TCATGAC-TTACAAGTCTCAGGGGTGTGCTTCTTTTTCATCTGTAATAAT  899
      ||||||| ||||||||||||||||||||||||||||||||||||| ||||
seq2  TCATGACTTTACAAGTCTCAGGGGTGTGCTTCTTTTTCATCTGTATTAAT  900

seq1  TTCCAATTACAACCATATTAACGACATTCTATTTATCCCTAAAAACAGAT  949
      ||||||||||||||||  | ||||||||||||||||||||||||||||||
seq2  TTCCAATTACAACCATTATTACGACATTCTATTTATCCCTAAAAACAGAT  950

seq1  CCAGGTCAATGGGCTTCATATACTCACCTCAACTGATAAAGCATGGCCAG  999
      ||||||| || |||||| | |||||||||  |||||| || |||||||||
seq2  CCAGGTC-ATTGGCTTCCTTTACTCACCTTCACTGAT-AATCATGGCCAG  998

seq1  ACAGGTGA-GAACTTGCCTCCTTAGTCTACTGGCACCCTA--GACATTTG  1046
      |||||||| ||||||||||||||||||||||| |||||||   |||||||
seq2  ACAGGTGATGAACTTGCCTCCTTAGTCTACTGCCACCCTAAGAACATTTG  1048

seq1  GCATCAACATTCCTAATAGTCTTTTATTGATAGTTTTAACCTGAGGTATA  1096
      ||||| |||||||||| ||||||||||||| || |||||||||| ||| |
seq2  GCATC-ACATTCCTAA-AGTCTTTTATTGAAAG-TTTAACCTGAAGTA-A  1094

seq1  GCTTGTGTGTCTAGGGCATGGTTTTTTT  1124
      || |||||||||| || ||| |||||||
seq2  GC-TGTGTGTCTA-GGTATGATTTTTTT  1120